RNA–Protein interactions for RNA: ENST00000552516.5

TGFBR1-209, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 1 (best) BASIC

Gene TGFBR1, Length 5,933 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-209ENST00000552516 PUS7LQ9H0K6 701 aaKnown RBP12.49□□□□□ -0.41
TGFBR1-209ENST00000552516 CABP5Q9NP86 173 aa12.49□□□□□ -0.41
TGFBR1-209ENST00000552516 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.49□□□□□ -0.41
TGFBR1-209ENST00000552516 CAMSAP1Q5T5Y3 1602 aa12.49□□□□□ -0.41
TGFBR1-209ENST00000552516 MAPKAPK5Q8IW41 473 aa12.49□□□□□ -0.41
TGFBR1-209ENST00000552516 PI4K2BQ8TCG2 481 aa12.49□□□□□ -0.41
TGFBR1-209ENST00000552516 ADGRL3Q9HAR2 1447 aa12.48□□□□□ -0.41
TGFBR1-209ENST00000552516 DIP2CQ9Y2E4 1556 aa12.48□□□□□ -0.41
TGFBR1-209ENST00000552516 TRIM37O94972 964 aa12.48□□□□□ -0.41
TGFBR1-209ENST00000552516 HSPD1P10809 573 aaKnown RBP12.48□□□□□ -0.41
TGFBR1-209ENST00000552516 CCDC102BQ68D86 513 aa12.48□□□□□ -0.41
TGFBR1-209ENST00000552516 MNS1Q8NEH6 495 aa12.48□□□□□ -0.41
TGFBR1-209ENST00000552516 ANAPC15P60006 121 aa12.48□□□□□ -0.41
TGFBR1-209ENST00000552516 M0R2C6 588 aa12.48□□□□□ -0.41
TGFBR1-209ENST00000552516 TSPY3P0CV98 308 aa12.48□□□□□ -0.41
TGFBR1-209ENST00000552516 TSPY8P0CW00 308 aa12.48□□□□□ -0.41
TGFBR1-209ENST00000552516 MCM7P33993 719 aa12.48□□□□□ -0.41
TGFBR1-209ENST00000552516 ZNF174Q15697 407 aa12.48□□□□□ -0.41
TGFBR1-209ENST00000552516 UFL1O94874 794 aa12.48□□□□□ -0.41
TGFBR1-209ENST00000552516 HMGB1P09429 215 aaKnown RBP12.48□□□□□ -0.41
TGFBR1-209ENST00000552516 PTGS1P23219 599 aa12.48□□□□□ -0.41
TGFBR1-209ENST00000552516 FNBP4Q8N3X1 1017 aaPredicted RBP12.48□□□□□ -0.41
TGFBR1-209ENST00000552516 KDRP35968 1356 aa12.48□□□□□ -0.41
TGFBR1-209ENST00000552516 ARHGEF40Q8TER5 1519 aa12.48□□□□□ -0.41
TGFBR1-209ENST00000552516 SCARF1Q14162 830 aa12.47□□□□□ -0.41
TGFBR1-209ENST00000552516 PDE8AO60658 829 aa12.47□□□□□ -0.41
TGFBR1-209ENST00000552516 DOK7Q18PE1 504 aa12.47□□□□□ -0.41
TGFBR1-209ENST00000552516 KAT14Q9H8E8 782 aa12.47□□□□□ -0.41
TGFBR1-209ENST00000552516 HMG20BQ9P0W2 317 aa12.47□□□□□ -0.41
TGFBR1-209ENST00000552516 GOLGA8HP0CJ92 632 aa12.47□□□□□ -0.41
TGFBR1-209ENST00000552516 SCNN1DP51172 638 aa12.47□□□□□ -0.41
TGFBR1-209ENST00000552516 CTSWP56202 376 aa12.47□□□□□ -0.41
TGFBR1-209ENST00000552516 HMGN5P82970 282 aaKnown RBP12.47□□□□□ -0.41
TGFBR1-209ENST00000552516 OSBP2Q969R2 916 aa12.47□□□□□ -0.41
TGFBR1-209ENST00000552516 V9GY48 417 aaPredicted RBP12.47□□□□□ -0.41
TGFBR1-209ENST00000552516 DYNLL1P63167 89 aaKnown RBP12.47□□□□□ -0.41
TGFBR1-209ENST00000552516 TTF1Q15361 905 aaPredicted RBP12.47□□□□□ -0.41
TGFBR1-209ENST00000552516 TRAPPC3LQ5T215 181 aa12.47□□□□□ -0.41
TGFBR1-209ENST00000552516 ANKRD20A12PQ8NF67 263 aa12.47□□□□□ -0.41
TGFBR1-209ENST00000552516 MYO3AQ8NEV4 1616 aa12.47□□□□□ -0.41
TGFBR1-209ENST00000552516 TYRO3Q06418 890 aa12.47□□□□□ -0.41
TGFBR1-209ENST00000552516 SPATA5Q8NB90 893 aa12.47□□□□□ -0.41
TGFBR1-209ENST00000552516 VEZTQ9HBM0 779 aa12.47□□□□□ -0.41
TGFBR1-209ENST00000552516 LETM1O95202 739 aaPredicted RBP12.46□□□□□ -0.41
TGFBR1-209ENST00000552516 WDR78Q5VTH9 848 aa12.46□□□□□ -0.41
TGFBR1-209ENST00000552516 IGSF3O75054 1194 aa12.46□□□□□ -0.41
TGFBR1-209ENST00000552516 SYKP43405 635 aa12.46□□□□□ -0.41
TGFBR1-209ENST00000552516 SPTY2D1Q68D10 685 aaPredicted RBP12.46□□□□□ -0.41
TGFBR1-209ENST00000552516 CCDC194A0A1B0GVG4 234 aa12.46□□□□□ -0.41
TGFBR1-209ENST00000552516 ZNF76P36508 570 aa12.46□□□□□ -0.41
TGFBR1-209ENST00000552516 EPS15P42566 896 aa12.46□□□□□ -0.41
TGFBR1-209ENST00000552516 PRKG1Q13976 671 aa12.46□□□□□ -0.41
TGFBR1-209ENST00000552516 MMRN2Q9H8L6 949 aa12.46□□□□□ -0.41
TGFBR1-209ENST00000552516 SPDYE4A6NLX3 237 aa12.46□□□□□ -0.42
TGFBR1-209ENST00000552516 TXLNAP40222 546 aa12.46□□□□□ -0.42
TGFBR1-209ENST00000552516 CNBD1Q8NA66 436 aa12.46□□□□□ -0.42
TGFBR1-209ENST00000552516 PKD2L1Q9P0L9 805 aa12.46□□□□□ -0.42
TGFBR1-209ENST00000552516 OFD1O75665 1012 aa12.46□□□□□ -0.42
TGFBR1-209ENST00000552516 ERFEQ4G0M1 354 aa12.46□□□□□ -0.42
TGFBR1-209ENST00000552516 DHX37Q8IY37 1157 aaKnown RBP12.46□□□□□ -0.42
TGFBR1-209ENST00000552516 VPS54Q9P1Q0 977 aa12.46□□□□□ -0.42
TGFBR1-209ENST00000552516 WDR17Q8IZU2 1322 aa12.45□□□□□ -0.42
TGFBR1-209ENST00000552516 IPO7O95373 1038 aaKnown RBP12.45□□□□□ -0.42
TGFBR1-209ENST00000552516 NEXMIFQ5QGS0 1516 aa12.45□□□□□ -0.42
TGFBR1-209ENST00000552516 CDK12Q9NYV4 1490 aaPredicted RBP12.45□□□□□ -0.42
TGFBR1-209ENST00000552516 UQCRFS1P1P0C7P4 283 aa12.45□□□□□ -0.42
TGFBR1-209ENST00000552516 PPARDQ03181 441 aa12.45□□□□□ -0.42
TGFBR1-209ENST00000552516 KIF2CQ99661 725 aa12.45□□□□□ -0.42
TGFBR1-209ENST00000552516 USP17L12C9JPN9 530 aa12.45□□□□□ -0.42
TGFBR1-209ENST00000552516 USP17L21D6R901 530 aa12.45□□□□□ -0.42
TGFBR1-209ENST00000552516 RAD51AP2Q09MP3 1159 aa12.45□□□□□ -0.42
TGFBR1-209ENST00000552516 PUM3Q15397 648 aaKnown RBP12.45□□□□□ -0.42
TGFBR1-209ENST00000552516 TGFBRAP1Q8WUH2 860 aa12.45□□□□□ -0.42
TGFBR1-209ENST00000552516 NR1I2O75469 434 aa12.45□□□□□ -0.42
TGFBR1-209ENST00000552516 HOXB7P09629 217 aa12.45□□□□□ -0.42
TGFBR1-209ENST00000552516 ZNF827Q17R98 1081 aa12.45□□□□□ -0.42
TGFBR1-209ENST00000552516 SUSD4Q5VX71 490 aa12.45□□□□□ -0.42
TGFBR1-209ENST00000552516 GPCPD1Q9NPB8 672 aa12.45□□□□□ -0.42
TGFBR1-209ENST00000552516 NOL7Q9UMY1 257 aaKnown RBP12.45□□□□□ -0.42
TGFBR1-209ENST00000552516 PNPLA6Q8IY17 1366 aa12.45□□□□□ -0.42
TGFBR1-209ENST00000552516 ATP5JP18859 108 aa12.44□□□□□ -0.42
TGFBR1-209ENST00000552516 CLIC6Q96NY7 704 aa12.44□□□□□ -0.42
TGFBR1-209ENST00000552516 ARHGAP31Q2M1Z3 1444 aa12.44□□□□□ -0.42
TGFBR1-209ENST00000552516 SPTLC2O15270 562 aa12.44□□□□□ -0.42
TGFBR1-209ENST00000552516 SEC63Q9UGP8 760 aaKnown RBP12.44□□□□□ -0.42
TGFBR1-209ENST00000552516 ADCY9O60503 1353 aa12.44□□□□□ -0.42
TGFBR1-209ENST00000552516 MROH2AA6NES4 1674 aa12.44□□□□□ -0.42
TGFBR1-209ENST00000552516 PIK3C2BO00750 1634 aa12.44□□□□□ -0.42
TGFBR1-209ENST00000552516 VWA3AA6NCI4 1184 aa12.44□□□□□ -0.42
TGFBR1-209ENST00000552516 CHRNDQ07001 517 aa12.44□□□□□ -0.42
TGFBR1-209ENST00000552516 SCRN1Q12765 414 aa12.44□□□□□ -0.42
TGFBR1-209ENST00000552516 ADAMTS13Q76LX8 1427 aa12.44□□□□□ -0.42
TGFBR1-209ENST00000552516 APPBP2Q92624 585 aa12.44□□□□□ -0.42
TGFBR1-209ENST00000552516 CRNKL1Q9BZJ0 848 aaKnown RBP12.44□□□□□ -0.42
TGFBR1-209ENST00000552516 FAM196AQ6ZSG2 479 aa12.44□□□□□ -0.42
TGFBR1-209ENST00000552516 TTC6Q86TZ1 520 aa12.44□□□□□ -0.42
TGFBR1-209ENST00000552516 ESR2Q92731 530 aa12.44□□□□□ -0.42
TGFBR1-209ENST00000552516 CCDC47Q96A33 483 aaKnown RBP12.44□□□□□ -0.42
TGFBR1-209ENST00000552516 ZC3H12CQ9C0D7 883 aaKnown RBP12.44□□□□□ -0.42
TGFBR1-209ENST00000552516 CPVLQ9H3G5 476 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms