RNA–Protein interactions for RNA: ENST00000552448.1

TUBA1C-209, Transcript of tubulin alpha 1c, humanhuman

TSL 3

Gene TUBA1C, Length 1,800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1C-209ENST00000552448 SLU7O95391 586 aaKnown RBP12.88□□□□□ -0.35
TUBA1C-209ENST00000552448 TYRO3Q06418 890 aa12.88□□□□□ -0.35
TUBA1C-209ENST00000552448 PTPN14Q15678 1187 aa12.88□□□□□ -0.35
TUBA1C-209ENST00000552448 KMT5BQ4FZB7 885 aa12.88□□□□□ -0.35
TUBA1C-209ENST00000552448 USPL1Q5W0Q7 1092 aa12.88□□□□□ -0.35
TUBA1C-209ENST00000552448 ZBTB38Q8NAP3 1195 aaPredicted RBP12.88□□□□□ -0.35
TUBA1C-209ENST00000552448 FAM89AQ96GI7 184 aa12.88□□□□□ -0.35
TUBA1C-209ENST00000552448 NEUROD6Q96NK8 337 aa12.88□□□□□ -0.35
TUBA1C-209ENST00000552448 LARP6Q9BRS8 491 aaKnown RBP12.88□□□□□ -0.35
TUBA1C-209ENST00000552448 PUS3Q9BZE2 481 aaKnown RBP12.88□□□□□ -0.35
TUBA1C-209ENST00000552448 ZBTB1Q9Y2K1 713 aa12.88□□□□□ -0.35
TUBA1C-209ENST00000552448 FIBPO43427 364 aa12.88□□□□□ -0.35
TUBA1C-209ENST00000552448 ATP8B1O43520 1251 aa12.88□□□□□ -0.35
TUBA1C-209ENST00000552448 LARGE1O95461 756 aa12.88□□□□□ -0.35
TUBA1C-209ENST00000552448 CSF1RP07333 972 aa12.88□□□□□ -0.35
TUBA1C-209ENST00000552448 KRT85P78386 507 aa12.88□□□□□ -0.35
TUBA1C-209ENST00000552448 HLFQ16534 295 aa12.88□□□□□ -0.35
TUBA1C-209ENST00000552448 TSGA10IPQ3SY00 556 aa12.88□□□□□ -0.35
TUBA1C-209ENST00000552448 CTR9Q6PD62 1173 aa12.88□□□□□ -0.35
TUBA1C-209ENST00000552448 SARM1Q6SZW1 724 aa12.88□□□□□ -0.35
TUBA1C-209ENST00000552448 RBM43Q6ZSC3 357 aaKnown RBP12.88□□□□□ -0.35
TUBA1C-209ENST00000552448 DDX46Q7L014 1031 aaKnown RBP12.88□□□□□ -0.35
TUBA1C-209ENST00000552448 TXLNBQ8N3L3 684 aa12.88□□□□□ -0.35
TUBA1C-209ENST00000552448 KBTBD3Q8NAB2 608 aa12.88□□□□□ -0.35
TUBA1C-209ENST00000552448 TRIM5Q9C035 493 aa12.88□□□□□ -0.35
TUBA1C-209ENST00000552448 MRVI1Q9Y6F6 885 aa12.88□□□□□ -0.35
TUBA1C-209ENST00000552448 CHGBP05060 677 aa12.87□□□□□ -0.35
TUBA1C-209ENST00000552448 EIF5P55010 431 aaKnown RBP12.87□□□□□ -0.35
TUBA1C-209ENST00000552448 TPM4P67936 248 aa12.87□□□□□ -0.35
TUBA1C-209ENST00000552448 CCDC57Q2TAC2 916 aa12.87□□□□□ -0.35
TUBA1C-209ENST00000552448 NYAP1Q6ZVC0 841 aa12.87□□□□□ -0.35
TUBA1C-209ENST00000552448 TICAM2Q86XR7 235 aa12.87□□□□□ -0.35
TUBA1C-209ENST00000552448 FBXO3Q9UK99 471 aa12.87□□□□□ -0.35
TUBA1C-209ENST00000552448 TAF6LQ9Y6J9 622 aa12.87□□□□□ -0.35
TUBA1C-209ENST00000552448 A0A1B0GUL7 405 aa12.86□□□□□ -0.35
TUBA1C-209ENST00000552448 RGL2O15211 777 aa12.86□□□□□ -0.35
TUBA1C-209ENST00000552448 PDCP20941 246 aa12.86□□□□□ -0.35
TUBA1C-209ENST00000552448 PSMA5P28066 241 aa12.86□□□□□ -0.35
TUBA1C-209ENST00000552448 COL9A3Q14050 684 aaPredicted RBP12.86□□□□□ -0.35
TUBA1C-209ENST00000552448 MUM1L1Q5H9M0 696 aa12.86□□□□□ -0.35
TUBA1C-209ENST00000552448 NLRP10Q86W26 655 aa12.86□□□□□ -0.35
TUBA1C-209ENST00000552448 MRFAP1L1Q96HT8 127 aa12.86□□□□□ -0.35
TUBA1C-209ENST00000552448 SCAND2PQ9GZW5 306 aaPredicted RBP12.86□□□□□ -0.35
TUBA1C-209ENST00000552448 PAG1Q9NWQ8 432 aa12.86□□□□□ -0.35
TUBA1C-209ENST00000552448 HMG20BQ9P0W2 317 aa12.86□□□□□ -0.35
TUBA1C-209ENST00000552448 CLIP2Q9UDT6 1046 aa12.86□□□□□ -0.35
TUBA1C-209ENST00000552448 CDHR2Q9BYE9 1310 aa12.86□□□□□ -0.35
TUBA1C-209ENST00000552448 CRKLP46109 303 aaKnown RBP12.85□□□□□ -0.35
TUBA1C-209ENST00000552448 FOXD4L6Q3SYB3 417 aaPredicted RBP12.85□□□□□ -0.35
TUBA1C-209ENST00000552448 MCMDC2Q4G0Z9 681 aa12.85□□□□□ -0.35
TUBA1C-209ENST00000552448 INTS5Q6P9B9 1019 aaKnown RBP12.85□□□□□ -0.35
TUBA1C-209ENST00000552448 FOXD4L3Q6VB84 417 aaPredicted RBP12.85□□□□□ -0.35
TUBA1C-209ENST00000552448 DZIP3Q86Y13 1208 aaKnown RBP12.85□□□□□ -0.35
TUBA1C-209ENST00000552448 SEC62Q99442 399 aaKnown RBP12.85□□□□□ -0.35
TUBA1C-209ENST00000552448 ALDH8A1Q9H2A2 487 aaPredicted RBP12.85□□□□□ -0.35
TUBA1C-209ENST00000552448 TNMDQ9H2S6 317 aa12.85□□□□□ -0.35
TUBA1C-209ENST00000552448 YY1AP1Q9H869 796 aa12.85□□□□□ -0.35
TUBA1C-209ENST00000552448 ARGLU1Q9NWB6 273 aaPredicted RBP12.85□□□□□ -0.35
TUBA1C-209ENST00000552448 CEP126Q9P2H0 1117 aa12.85□□□□□ -0.35
TUBA1C-209ENST00000552448 V9GYY5 206 aaPredicted RBP12.85□□□□□ -0.35
TUBA1C-209ENST00000552448 MYH3P11055 1940 aa12.85□□□□□ -0.35
TUBA1C-209ENST00000552448 MYH14Q7Z406 1995 aaKnown RBP12.85□□□□□ -0.35
TUBA1C-209ENST00000552448 VGLL3A8MV65 326 aa12.85□□□□□ -0.35
TUBA1C-209ENST00000552448 GOLIM4O00461 696 aa12.85□□□□□ -0.35
TUBA1C-209ENST00000552448 KCNQ2O43526 872 aa12.85□□□□□ -0.35
TUBA1C-209ENST00000552448 TPM1P09493 284 aa12.85□□□□□ -0.35
TUBA1C-209ENST00000552448 GPS2Q13227 327 aa12.85□□□□□ -0.35
TUBA1C-209ENST00000552448 CCDC129Q6ZRS4 1044 aa12.85□□□□□ -0.35
TUBA1C-209ENST00000552448 SYNE4Q8N205 404 aa12.85□□□□□ -0.35
TUBA1C-209ENST00000552448 CBX8Q9HC52 389 aa12.85□□□□□ -0.35
TUBA1C-209ENST00000552448 ZNF215Q9UL58 517 aaPredicted RBP12.85□□□□□ -0.35
TUBA1C-209ENST00000552448 LY75O60449 1722 aa12.85□□□□□ -0.35
TUBA1C-209ENST00000552448 SH3TC1Q8TE82 1336 aa12.85□□□□□ -0.35
TUBA1C-209ENST00000552448 BCORQ6W2J9 1755 aa12.85□□□□□ -0.35
TUBA1C-209ENST00000552448 H2AFXP16104 143 aaPredicted RBP12.84□□□□□ -0.35
TUBA1C-209ENST00000552448 RPS6KB1P23443 525 aa12.84□□□□□ -0.35
TUBA1C-209ENST00000552448 GPTP24298 496 aa12.84□□□□□ -0.35
TUBA1C-209ENST00000552448 IRX3P78415 501 aaPredicted RBP12.84□□□□□ -0.35
TUBA1C-209ENST00000552448 ST3GAL1Q11201 340 aa12.84□□□□□ -0.35
TUBA1C-209ENST00000552448 ME3Q16798 604 aa12.84□□□□□ -0.35
TUBA1C-209ENST00000552448 FBXO38Q6PIJ6 1188 aa12.84□□□□□ -0.35
TUBA1C-209ENST00000552448 BLOC1S2Q6QNY1 142 aa12.84□□□□□ -0.35
TUBA1C-209ENST00000552448 CCDC83Q8IWF9 413 aa12.84□□□□□ -0.35
TUBA1C-209ENST00000552448 LRRC8AQ8IWT6 810 aa12.84□□□□□ -0.35
TUBA1C-209ENST00000552448 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.84□□□□□ -0.35
TUBA1C-209ENST00000552448 TPCN1Q9ULQ1 816 aa12.84□□□□□ -0.35
TUBA1C-209ENST00000552448 MTMR6Q9Y217 621 aa12.84□□□□□ -0.35
TUBA1C-209ENST00000552448 CNTNAP4Q9C0A0 1308 aa12.84□□□□□ -0.35
TUBA1C-209ENST00000552448 SPEF2Q9C093 1822 aa12.84□□□□□ -0.35
TUBA1C-209ENST00000552448 IFIT1P09914 478 aaKnown RBP12.83□□□□□ -0.35
TUBA1C-209ENST00000552448 GSDMDP57764 484 aa12.83□□□□□ -0.35
TUBA1C-209ENST00000552448 IFIT5Q13325 482 aaKnown RBP12.83□□□□□ -0.35
TUBA1C-209ENST00000552448 ITPK1Q13572 414 aa12.83□□□□□ -0.35
TUBA1C-209ENST00000552448 FILIP1Q7Z7B0 1213 aa12.83□□□□□ -0.35
TUBA1C-209ENST00000552448 CCDC85AQ96PX6 553 aaPredicted RBP12.83□□□□□ -0.35
TUBA1C-209ENST00000552448 QTRT2Q9H974 415 aaKnown RBP12.83□□□□□ -0.35
TUBA1C-209ENST00000552448 HELLSQ9NRZ9 838 aa12.83□□□□□ -0.35
TUBA1C-209ENST00000552448 CWC15Q9P013 229 aaKnown RBP12.83□□□□□ -0.35
TUBA1C-209ENST00000552448 AKAP2Q9Y2D5 859 aa12.83□□□□□ -0.35
TUBA1C-209ENST00000552448 U3KPZ7 1027 aaPredicted RBP12.83□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms