RNA–Protein interactions for RNA: ENST00000552351.5

CHPT1-210, Transcript of choline phosphotransferase 1, human

TSL 2

Gene CHPT1, Length 1,524 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHPT1-210	ENST00000552351	TNNI3K	Q59H18	835 aa		33.23	■■■□□ 2.91
CHPT1-210	ENST00000552351	NEUROD6	Q96NK8	337 aa		33.23	■■■□□ 2.91
CHPT1-210	ENST00000552351	FPGT-TNNI3K	V9GXZ4	949 aa		33.23	■■■□□ 2.91
CHPT1-210	ENST00000552351	ADAMTSL1	Q8N6G6	1762 aa		33.22	■■■□□ 2.91
CHPT1-210	ENST00000552351	SEMA3E	O15041	775 aa		33.22	■■■□□ 2.91
CHPT1-210	ENST00000552351	USP17L8	P0C7I0	530 aa		33.22	■■■□□ 2.91
CHPT1-210	ENST00000552351	KIF1BP	Q96EK5	621 aa		33.22	■■■□□ 2.91
CHPT1-210	ENST00000552351	ADORA1	P30542	326 aa		33.21	■■■□□ 2.91
CHPT1-210	ENST00000552351	ZNF280A	P59817	542 aa	Predicted RBP	33.21	■■■□□ 2.91
CHPT1-210	ENST00000552351	CCDC102B	Q68D86	513 aa		33.2	■■■□□ 2.91
CHPT1-210	ENST00000552351	RHPN1	Q8TCX5	695 aa		33.2	■■■□□ 2.91
CHPT1-210	ENST00000552351	TBC1D22A	Q8WUA7	517 aa		33.2	■■■□□ 2.91
CHPT1-210	ENST00000552351	LDHD	Q86WU2	507 aa		33.19	■■■□□ 2.9
CHPT1-210	ENST00000552351	OGFOD1	Q8N543	542 aa		33.19	■■■□□ 2.9
CHPT1-210	ENST00000552351	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	33.18	■■■□□ 2.9
CHPT1-210	ENST00000552351	PHKA1	P46020	1223 aa		33.18	■■■□□ 2.9
CHPT1-210	ENST00000552351	GORAB	Q5T7V8	394 aa		33.18	■■■□□ 2.9
CHPT1-210	ENST00000552351	MXD3	Q9BW11	206 aa		33.18	■■■□□ 2.9
CHPT1-210	ENST00000552351	DCTPP1	Q9H773	170 aa		33.18	■■■□□ 2.9
CHPT1-210	ENST00000552351	EAPP	Q56P03	285 aa	Predicted RBP	33.17	■■■□□ 2.9
CHPT1-210	ENST00000552351	MFSD14B	Q5SR56	506 aa		33.17	■■■□□ 2.9
CHPT1-210	ENST00000552351	CERS5	Q8N5B7	392 aa		33.17	■■■□□ 2.9
CHPT1-210	ENST00000552351	SMC1B	Q8NDV3	1235 aa		33.17	■■■□□ 2.9
CHPT1-210	ENST00000552351	DENND2A	Q9ULE3	1009 aa		33.17	■■■□□ 2.9
CHPT1-210	ENST00000552351	PDS5A	Q29RF7	1337 aa	Known RBP	33.16	■■■□□ 2.9
CHPT1-210	ENST00000552351	FSTL1	Q12841	308 aa		33.16	■■■□□ 2.9
CHPT1-210	ENST00000552351	EXOC6	Q8TAG9	804 aa		33.16	■■■□□ 2.9
CHPT1-210	ENST00000552351	WDR66	Q8TBY9	1149 aa		33.16	■■■□□ 2.9
CHPT1-210	ENST00000552351	CLASRP	Q8N2M8	674 aa	Known RBP	33.15	■■■□□ 2.9
CHPT1-210	ENST00000552351	HDAC9	Q9UKV0	1011 aa		33.15	■■■□□ 2.9
CHPT1-210	ENST00000552351	SHTN1	A0MZ66	631 aa		33.14	■■■□□ 2.9
CHPT1-210	ENST00000552351	ZC3H15	Q8WU90	426 aa	Known RBP	33.14	■■■□□ 2.9
CHPT1-210	ENST00000552351	EAF2	Q96CJ1	260 aa	Predicted RBP	33.14	■■■□□ 2.9
CHPT1-210	ENST00000552351	CHADL	Q6NUI6	762 aa		33.13	■■■□□ 2.89
CHPT1-210	ENST00000552351	KIAA0825	Q8IV33	1275 aa		33.13	■■■□□ 2.89
CHPT1-210	ENST00000552351	JAG2	Q9Y219	1238 aa		33.13	■■■□□ 2.89
CHPT1-210	ENST00000552351	SUGT1	Q9Y2Z0	365 aa		33.13	■■■□□ 2.89
CHPT1-210	ENST00000552351	CHAF1A	Q13111	956 aa	Predicted RBP	33.12	■■■□□ 2.89
CHPT1-210	ENST00000552351	HDAC1	Q13547	482 aa	Predicted RBP	33.12	■■■□□ 2.89
CHPT1-210	ENST00000552351	CCDC158	Q5M9N0	1113 aa		33.12	■■■□□ 2.89
CHPT1-210	ENST00000552351	SAMD7	Q7Z3H4	446 aa		33.12	■■■□□ 2.89
CHPT1-210	ENST00000552351	COL1A1	P02452	1464 aa	Predicted RBP	33.12	■■■□□ 2.89
CHPT1-210	ENST00000552351	UQCRFS1P1	P0C7P4	283 aa		33.12	■■■□□ 2.89
CHPT1-210	ENST00000552351	POTEI	P0CG38	1075 aa		33.12	■■■□□ 2.89
CHPT1-210	ENST00000552351	POTEJ	P0CG39	1038 aa		33.12	■■■□□ 2.89
CHPT1-210	ENST00000552351	ARID4A	P29374	1257 aa	Predicted RBP	33.12	■■■□□ 2.89
CHPT1-210	ENST00000552351	TRPM4	Q8TD43	1214 aa		33.12	■■■□□ 2.89
CHPT1-210	ENST00000552351	DBNDD2	Q9BQY9	259 aa		33.12	■■■□□ 2.89
CHPT1-210	ENST00000552351	LRRCC1	Q9C099	1032 aa		33.12	■■■□□ 2.89
CHPT1-210	ENST00000552351	MYOZ2	Q9NPC6	264 aa		33.12	■■■□□ 2.89
CHPT1-210	ENST00000552351	KIF4B	Q2VIQ3	1234 aa		33.11	■■■□□ 2.89
CHPT1-210	ENST00000552351	AACS	Q86V21	672 aa		33.11	■■■□□ 2.89
CHPT1-210	ENST00000552351	ZNF512B	Q96KM6	892 aa	Predicted RBP	33.11	■■■□□ 2.89
CHPT1-210	ENST00000552351	PGAP2	Q9UHJ9	254 aa		33.11	■■■□□ 2.89
CHPT1-210	ENST00000552351	DBNL	Q9UJU6	430 aa	Known RBP	33.11	■■■□□ 2.89
CHPT1-210	ENST00000552351	CLEC11A	Q9Y240	323 aa		33.11	■■■□□ 2.89
CHPT1-210	ENST00000552351	SALL1	Q9NSC2	1324 aa		33.11	■■■□□ 2.89
CHPT1-210	ENST00000552351	C1QTNF8	P60827	252 aa		33.1	■■■□□ 2.89
CHPT1-210	ENST00000552351	RASGRF1	Q13972	1273 aa		33.1	■■■□□ 2.89
CHPT1-210	ENST00000552351	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	33.1	■■■□□ 2.89
CHPT1-210	ENST00000552351	IL1RAPL2	Q9NP60	686 aa		33.1	■■■□□ 2.89
CHPT1-210	ENST00000552351	APBB1	O00213	710 aa		33.09	■■■□□ 2.89
CHPT1-210	ENST00000552351	HIRA	P54198	1017 aa	Predicted RBP	33.09	■■■□□ 2.89
CHPT1-210	ENST00000552351	ZGPAT	Q8N5A5	531 aa	Known RBP	33.08	■■■□□ 2.89
CHPT1-210	ENST00000552351	CCDC8	Q9H0W5	538 aa	Predicted RBP	33.08	■■■□□ 2.89
CHPT1-210	ENST00000552351	EGFR	P00533	1210 aa		33.07	■■■□□ 2.88
CHPT1-210	ENST00000552351	TTC39A	Q5SRH9	613 aa		33.07	■■■□□ 2.88
CHPT1-210	ENST00000552351	RBM26	Q5T8P6	1007 aa	Known RBP	33.06	■■■□□ 2.88
CHPT1-210	ENST00000552351	MTMR14	Q8NCE2	650 aa		33.06	■■■□□ 2.88
CHPT1-210	ENST00000552351	TTF2	Q9UNY4	1162 aa	Known RBP	33.06	■■■□□ 2.88
CHPT1-210	ENST00000552351	MAST3	O60307	1309 aa		33.06	■■■□□ 2.88
CHPT1-210	ENST00000552351	IFIT2	P09913	472 aa	Known RBP	33.05	■■■□□ 2.88
CHPT1-210	ENST00000552351	HDLBP	Q00341	1268 aa	Known RBP	33.05	■■■□□ 2.88
CHPT1-210	ENST00000552351	SPATA5	Q8NB90	893 aa		33.05	■■■□□ 2.88
CHPT1-210	ENST00000552351	TLR7	Q9NYK1	1049 aa	Known RBP	33.05	■■■□□ 2.88
CHPT1-210	ENST00000552351	SERPINA10	Q9UK55	444 aa		33.05	■■■□□ 2.88
CHPT1-210	ENST00000552351	AKAP11	Q9UKA4	1901 aa		33.04	■■■□□ 2.88
CHPT1-210	ENST00000552351		F8W031	263 aa	Predicted RBP	33.04	■■■□□ 2.88
CHPT1-210	ENST00000552351	GCC1	Q96CN9	775 aa		33.04	■■■□□ 2.88
CHPT1-210	ENST00000552351	MRI	Q9BWK5	157 aa		33.04	■■■□□ 2.88
CHPT1-210	ENST00000552351	HMG20B	Q9P0W2	317 aa		33.04	■■■□□ 2.88
CHPT1-210	ENST00000552351	CENPB	P07199	599 aa	Predicted RBP	33.03	■■■□□ 2.88
CHPT1-210	ENST00000552351	RWDD1	Q9H446	243 aa	Predicted RBP	33.03	■■■□□ 2.88
CHPT1-210	ENST00000552351	MCAM	P43121	646 aa		33.02	■■■□□ 2.88
CHPT1-210	ENST00000552351	IRX6	P78412	446 aa	Predicted RBP	33.02	■■■□□ 2.88
CHPT1-210	ENST00000552351	ZBED3	Q96IU2	234 aa	Predicted RBP	33.02	■■■□□ 2.88
CHPT1-210	ENST00000552351	ECM29	Q5VYK3	1845 aa		33.02	■■■□□ 2.88
CHPT1-210	ENST00000552351	CNTROB	Q8N137	903 aa		33.02	■■■□□ 2.88
CHPT1-210	ENST00000552351	WNT10B	O00744	389 aa		33.01	■■■□□ 2.87
CHPT1-210	ENST00000552351	SCARF1	Q14162	830 aa		33.01	■■■□□ 2.87
CHPT1-210	ENST00000552351	DLGAP5	Q15398	846 aa		33.01	■■■□□ 2.87
CHPT1-210	ENST00000552351	MAP1S	Q66K74	1059 aa	Predicted RBP	33.01	■■■□□ 2.87
CHPT1-210	ENST00000552351	PITPNM2	Q9BZ72	1349 aa		33	■■■□□ 2.87
CHPT1-210	ENST00000552351	SPTY2D1	Q68D10	685 aa	Predicted RBP	33	■■■□□ 2.87
CHPT1-210	ENST00000552351	ITGBL1	O95965	494 aa	Predicted RBP	32.99	■■■□□ 2.87
CHPT1-210	ENST00000552351	LDHB	P07195	334 aa	Known RBP	32.99	■■■□□ 2.87
CHPT1-210	ENST00000552351	GRIK5	Q16478	980 aa		32.99	■■■□□ 2.87
CHPT1-210	ENST00000552351	IGSF3	O75054	1194 aa		32.98	■■■□□ 2.87
CHPT1-210	ENST00000552351	CFAP100	Q494V2	611 aa		32.98	■■■□□ 2.87
CHPT1-210	ENST00000552351	DCPS	Q96C86	337 aa	Known RBP	32.98	■■■□□ 2.87

Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms