RNA–Protein interactions for RNA: ENST00000552020.1

PPFIA2-226, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 3

Gene PPFIA2, Length 491 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-226ENST00000552020 TOR4AQ9NXH8 423 aa8.1□□□□□ -1.11
PPFIA2-226ENST00000552020 COL4A3BPQ9Y5P4 624 aa8.1□□□□□ -1.11
PPFIA2-226ENST00000552020 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.1□□□□□ -1.11
PPFIA2-226ENST00000552020 SHROOM2Q13796 1616 aa8.1□□□□□ -1.11
PPFIA2-226ENST00000552020 KLF4O43474 513 aa8.09□□□□□ -1.11
PPFIA2-226ENST00000552020 EGFRP00533 1210 aa8.09□□□□□ -1.11
PPFIA2-226ENST00000552020 CELA3AP09093 270 aa8.09□□□□□ -1.11
PPFIA2-226ENST00000552020 BMP2P12643 396 aa8.09□□□□□ -1.11
PPFIA2-226ENST00000552020 C6orf118Q5T5N4 469 aa8.09□□□□□ -1.11
PPFIA2-226ENST00000552020 PEAR1Q5VY43 1037 aaPredicted RBP8.09□□□□□ -1.11
PPFIA2-226ENST00000552020 RHOVQ96L33 236 aa8.09□□□□□ -1.11
PPFIA2-226ENST00000552020 SLKQ9H2G2 1235 aaPredicted RBP8.09□□□□□ -1.11
PPFIA2-226ENST00000552020 RUBCNLQ9H714 662 aa8.09□□□□□ -1.11
PPFIA2-226ENST00000552020 ABCB6Q9NP58 842 aa8.09□□□□□ -1.11
PPFIA2-226ENST00000552020 PRKAG3Q9UGI9 489 aa8.09□□□□□ -1.11
PPFIA2-226ENST00000552020 DACH1Q9UI36 760 aa8.09□□□□□ -1.11
PPFIA2-226ENST00000552020 NOP58Q9Y2X3 529 aaKnown RBP8.09□□□□□ -1.11
PPFIA2-226ENST00000552020 FAM221BA6H8Z2 402 aa8.08□□□□□ -1.12
PPFIA2-226ENST00000552020 AVPP01185 164 aa8.08□□□□□ -1.12
PPFIA2-226ENST00000552020 PCNX4Q63HM2 1172 aa8.08□□□□□ -1.12
PPFIA2-226ENST00000552020 CRIPAKQ8N1N5 446 aa8.08□□□□□ -1.12
PPFIA2-226ENST00000552020 RNF217Q8TC41 542 aa8.08□□□□□ -1.12
PPFIA2-226ENST00000552020 PRG4Q92954 1404 aaPredicted RBP8.08□□□□□ -1.12
PPFIA2-226ENST00000552020 GRIN2AQ12879 1464 aa8.07□□□□□ -1.12
PPFIA2-226ENST00000552020 SMAD7O15105 426 aaKnown RBP8.07□□□□□ -1.12
PPFIA2-226ENST00000552020 TLR3O15455 904 aaKnown RBP8.07□□□□□ -1.12
PPFIA2-226ENST00000552020 DNAJC6O75061 913 aa8.07□□□□□ -1.12
PPFIA2-226ENST00000552020 LMNB1P20700 586 aa8.07□□□□□ -1.12
PPFIA2-226ENST00000552020 CAMK2GQ13555 558 aaPredicted RBP8.07□□□□□ -1.12
PPFIA2-226ENST00000552020 RASA3Q14644 834 aa8.07□□□□□ -1.12
PPFIA2-226ENST00000552020 FBXW10Q5XX13 1052 aa8.07□□□□□ -1.12
PPFIA2-226ENST00000552020 NCAPG2Q86XI2 1143 aa8.07□□□□□ -1.12
PPFIA2-226ENST00000552020 PGBD3Q8N328 593 aa8.07□□□□□ -1.12
PPFIA2-226ENST00000552020 CEP44Q9C0F1 390 aa8.07□□□□□ -1.12
PPFIA2-226ENST00000552020 IFT57Q9NWB7 429 aa8.07□□□□□ -1.12
PPFIA2-226ENST00000552020 GMPR2Q9P2T1 348 aaKnown RBP8.07□□□□□ -1.12
PPFIA2-226ENST00000552020 TTBK1Q5TCY1 1321 aaPredicted RBP8.06□□□□□ -1.12
PPFIA2-226ENST00000552020 PPP1R12AO14974 1030 aaPredicted RBP8.06□□□□□ -1.12
PPFIA2-226ENST00000552020 MMP20O60882 483 aa8.06□□□□□ -1.12
PPFIA2-226ENST00000552020 CDC45O75419 566 aa8.06□□□□□ -1.12
PPFIA2-226ENST00000552020 RARAP10276 462 aa8.06□□□□□ -1.12
PPFIA2-226ENST00000552020 TARSP26639 723 aaKnown RBP8.06□□□□□ -1.12
PPFIA2-226ENST00000552020 SEZ6Q53EL9 994 aa8.06□□□□□ -1.12
PPFIA2-226ENST00000552020 TNNI3KQ59H18 835 aa8.06□□□□□ -1.12
PPFIA2-226ENST00000552020 WDR44Q5JSH3 913 aa8.06□□□□□ -1.12
PPFIA2-226ENST00000552020 TTBK2Q6IQ55 1244 aa8.06□□□□□ -1.12
PPFIA2-226ENST00000552020 SH3TC2Q8TF17 1288 aa8.06□□□□□ -1.12
PPFIA2-226ENST00000552020 ZCCHC2Q9C0B9 1178 aaKnown RBP8.06□□□□□ -1.12
PPFIA2-226ENST00000552020 FANCLQ9NW38 375 aa8.06□□□□□ -1.12
PPFIA2-226ENST00000552020 SALL4Q9UJQ4 1053 aa8.06□□□□□ -1.12
PPFIA2-226ENST00000552020 PPT2Q9UMR5 302 aa8.06□□□□□ -1.12
PPFIA2-226ENST00000552020 KCNH4Q9UQ05 1017 aa8.06□□□□□ -1.12
PPFIA2-226ENST00000552020 TOP2BQ02880 1626 aa8.06□□□□□ -1.12
PPFIA2-226ENST00000552020 ADCY10Q96PN6 1610 aa8.06□□□□□ -1.12
PPFIA2-226ENST00000552020 SPATA31D1Q6ZQQ2 1576 aa8.05□□□□□ -1.12
PPFIA2-226ENST00000552020 ARID4BQ4LE39 1312 aaPredicted RBP8.05□□□□□ -1.12
PPFIA2-226ENST00000552020 GARTP22102 1010 aa8.05□□□□□ -1.12
PPFIA2-226ENST00000552020 IFRD2Q12894 506 aaPredicted RBP8.05□□□□□ -1.12
PPFIA2-226ENST00000552020 OR13H1Q8NG92 308 aa8.05□□□□□ -1.12
PPFIA2-226ENST00000552020 HPS1Q92902 700 aa8.05□□□□□ -1.12
PPFIA2-226ENST00000552020 PNMA5Q96PV4 448 aa8.05□□□□□ -1.12
PPFIA2-226ENST00000552020 FERD3LQ96RJ6 166 aa8.05□□□□□ -1.12
PPFIA2-226ENST00000552020 TCF12Q99081 682 aa8.05□□□□□ -1.12
PPFIA2-226ENST00000552020 OSMRQ99650 979 aa8.05□□□□□ -1.12
PPFIA2-226ENST00000552020 ZKSCAN3Q9BRR0 538 aa8.05□□□□□ -1.12
PPFIA2-226ENST00000552020 SPC25Q9HBM1 224 aa8.05□□□□□ -1.12
PPFIA2-226ENST00000552020 METTL14Q9HCE5 456 aaKnown RBP8.05□□□□□ -1.12
PPFIA2-226ENST00000552020 ST7Q9NRC1 585 aa8.05□□□□□ -1.12
PPFIA2-226ENST00000552020 KLHL42Q9P2K6 505 aa8.05□□□□□ -1.12
PPFIA2-226ENST00000552020 GPN3Q9UHW5 284 aaPredicted RBP8.05□□□□□ -1.12
PPFIA2-226ENST00000552020 NUP160Q12769 1436 aa8.04□□□□□ -1.12
PPFIA2-226ENST00000552020 CAPN5O15484 640 aaPredicted RBP8.04□□□□□ -1.12
PPFIA2-226ENST00000552020 GREM1O60565 184 aa8.04□□□□□ -1.12
PPFIA2-226ENST00000552020 WFS1O76024 890 aa8.04□□□□□ -1.12
PPFIA2-226ENST00000552020 ACPPP15309 386 aa8.04□□□□□ -1.12
PPFIA2-226ENST00000552020 SMPD1P17405 629 aa8.04□□□□□ -1.12
PPFIA2-226ENST00000552020 MCM4P33991 863 aa8.04□□□□□ -1.12
PPFIA2-226ENST00000552020 CRKP46108 304 aa8.04□□□□□ -1.12
PPFIA2-226ENST00000552020 EIF6P56537 245 aaKnown RBP8.04□□□□□ -1.12
PPFIA2-226ENST00000552020 LMNB2Q03252 620 aa8.04□□□□□ -1.12
PPFIA2-226ENST00000552020 CCINQ13939 588 aa8.04□□□□□ -1.12
PPFIA2-226ENST00000552020 ANKRD24Q8TF21 1146 aa8.04□□□□□ -1.12
PPFIA2-226ENST00000552020 CRBNQ96SW2 442 aa8.04□□□□□ -1.12
PPFIA2-226ENST00000552020 GAS2L1Q99501 681 aaPredicted RBP8.04□□□□□ -1.12
PPFIA2-226ENST00000552020 BRINP2Q9C0B6 783 aa8.04□□□□□ -1.12
PPFIA2-226ENST00000552020 KCNQ5Q9NR82 932 aa8.04□□□□□ -1.12
PPFIA2-226ENST00000552020 PPRC1Q5VV67 1664 aaKnown RBP8.04□□□□□ -1.12
PPFIA2-226ENST00000552020 COL17A1Q9UMD9 1497 aaPredicted RBP8.03□□□□□ -1.12
PPFIA2-226ENST00000552020 FIGNL2A6NMB9 653 aa8.03□□□□□ -1.12
PPFIA2-226ENST00000552020 TRPA1O75762 1119 aa8.03□□□□□ -1.12
PPFIA2-226ENST00000552020 TRIM37O94972 964 aa8.03□□□□□ -1.12
PPFIA2-226ENST00000552020 PSAPP07602 524 aa8.03□□□□□ -1.12
PPFIA2-226ENST00000552020 TFE3P19532 575 aaPredicted RBP8.03□□□□□ -1.12
PPFIA2-226ENST00000552020 SMCPP49901 116 aaPredicted RBP8.03□□□□□ -1.12
PPFIA2-226ENST00000552020 HYAL2Q12891 473 aa8.03□□□□□ -1.12
PPFIA2-226ENST00000552020 CCNJLQ8IV13 435 aa8.03□□□□□ -1.12
PPFIA2-226ENST00000552020 APPBP2Q92624 585 aa8.03□□□□□ -1.12
PPFIA2-226ENST00000552020 SHDQ96IW2 340 aa8.03□□□□□ -1.12
PPFIA2-226ENST00000552020 DNAJC7Q99615 494 aa8.03□□□□□ -1.12
PPFIA2-226ENST00000552020 ZFYVE1Q9HBF4 777 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms