RNA–Protein interactions for RNA: ENST00000552000.2

HOXB3-213, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-213ENST00000552000 GPTP24298 496 aa7.2□□□□□ -1.26
HOXB3-213ENST00000552000 KIF23Q02241 960 aaPredicted RBP7.2□□□□□ -1.26
HOXB3-213ENST00000552000 CTC1Q2NKJ3 1217 aa7.2□□□□□ -1.26
HOXB3-213ENST00000552000 GRIPAP1Q4V328 841 aa7.2□□□□□ -1.26
HOXB3-213ENST00000552000 RGMBQ6NW40 437 aa7.2□□□□□ -1.26
HOXB3-213ENST00000552000 CTU1Q7Z7A3 348 aaKnown RBP7.2□□□□□ -1.26
HOXB3-213ENST00000552000 NGEFQ8N5V2 710 aa7.2□□□□□ -1.26
HOXB3-213ENST00000552000 ZC3H15Q8WU90 426 aaKnown RBP7.2□□□□□ -1.26
HOXB3-213ENST00000552000 BBXQ8WY36 941 aaPredicted RBP7.2□□□□□ -1.26
HOXB3-213ENST00000552000 RBM17Q96I25 401 aaKnown RBP7.2□□□□□ -1.26
HOXB3-213ENST00000552000 RNF186Q9NXI6 227 aa7.2□□□□□ -1.26
HOXB3-213ENST00000552000 DACH1Q9UI36 760 aa7.2□□□□□ -1.26
HOXB3-213ENST00000552000 ZNRF3Q9ULT6 936 aa7.2□□□□□ -1.26
HOXB3-213ENST00000552000 LOC100996750A0A140TA64 210 aa7.19□□□□□ -1.26
HOXB3-213ENST00000552000 FAM155AB1AL88 458 aaPredicted RBP7.19□□□□□ -1.26
HOXB3-213ENST00000552000 WIPF1O43516 503 aa7.19□□□□□ -1.26
HOXB3-213ENST00000552000 AVPP01185 164 aa7.19□□□□□ -1.26
HOXB3-213ENST00000552000 EIF4G2P78344 907 aaKnown RBP eCLIP7.19□□□□□ -1.26
HOXB3-213ENST00000552000 PHACTR3Q96KR7 559 aa7.19□□□□□ -1.26
HOXB3-213ENST00000552000 CRAMP1Q96RY5 1269 aa7.19□□□□□ -1.26
HOXB3-213ENST00000552000 KRTAP4-6Q9BYQ5 205 aa7.19□□□□□ -1.26
HOXB3-213ENST00000552000 GBA2Q9HCG7 927 aaPredicted RBP7.19□□□□□ -1.26
HOXB3-213ENST00000552000 SAGE1Q9NXZ1 904 aa7.19□□□□□ -1.26
HOXB3-213ENST00000552000 KIF7Q2M1P5 1343 aa7.19□□□□□ -1.26
HOXB3-213ENST00000552000 RIC1Q4ADV7 1423 aa7.18□□□□□ -1.26
HOXB3-213ENST00000552000 H7C1D1 291 aa7.18□□□□□ -1.26
HOXB3-213ENST00000552000 CD2BP2O95400 341 aaKnown RBP7.18□□□□□ -1.26
HOXB3-213ENST00000552000 ZNF157P51786 506 aaPredicted RBP7.18□□□□□ -1.26
HOXB3-213ENST00000552000 TTLL7Q6ZT98 887 aa7.18□□□□□ -1.26
HOXB3-213ENST00000552000 MCM10Q7L590 875 aa7.18□□□□□ -1.26
HOXB3-213ENST00000552000 KRT26Q7Z3Y9 468 aa7.18□□□□□ -1.26
HOXB3-213ENST00000552000 SPSB2Q99619 263 aa7.18□□□□□ -1.26
HOXB3-213ENST00000552000 TMX4Q9H1E5 349 aaPredicted RBP7.18□□□□□ -1.26
HOXB3-213ENST00000552000 CNOT7Q9UIV1 285 aaKnown RBP7.18□□□□□ -1.26
HOXB3-213ENST00000552000 RANBP2P49792 3224 aaKnown RBP7.18□□□□□ -1.26
HOXB3-213ENST00000552000 UBN2Q6ZU65 1347 aa7.18□□□□□ -1.26
HOXB3-213ENST00000552000 CDHR2Q9BYE9 1310 aa7.18□□□□□ -1.26
HOXB3-213ENST00000552000 SZT2Q5T011 3432 aa7.18□□□□□ -1.26
HOXB3-213ENST00000552000 TAF1P21675 1872 aa7.17□□□□□ -1.26
HOXB3-213ENST00000552000 RCCD1A6NED2 376 aa7.17□□□□□ -1.26
HOXB3-213ENST00000552000 PRKAR2BP31323 418 aa7.17□□□□□ -1.26
HOXB3-213ENST00000552000 RPIAP49247 311 aa7.17□□□□□ -1.26
HOXB3-213ENST00000552000 KIAA2012Q0VF49 1180 aa7.17□□□□□ -1.26
HOXB3-213ENST00000552000 NFX1Q12986 1120 aaKnown RBP7.17□□□□□ -1.26
HOXB3-213ENST00000552000 CNGB1Q14028 1251 aaPredicted RBP7.17□□□□□ -1.26
HOXB3-213ENST00000552000 TNIP1Q15025 636 aa7.17□□□□□ -1.26
HOXB3-213ENST00000552000 CC2D1BQ5T0F9 858 aaKnown RBP7.17□□□□□ -1.26
HOXB3-213ENST00000552000 SUSD4Q5VX71 490 aa7.17□□□□□ -1.26
HOXB3-213ENST00000552000 DPP8Q6V1X1 898 aaPredicted RBP7.17□□□□□ -1.26
HOXB3-213ENST00000552000 C2orf69Q8N8R5 385 aa7.17□□□□□ -1.26
HOXB3-213ENST00000552000 SPRYD3Q8NCJ5 442 aa7.17□□□□□ -1.26
HOXB3-213ENST00000552000 SUPT20HQ8NEM7 779 aa7.17□□□□□ -1.26
HOXB3-213ENST00000552000 CCDC102AQ96A19 550 aa7.17□□□□□ -1.26
HOXB3-213ENST00000552000 CSRNP1Q96S65 589 aa7.17□□□□□ -1.26
HOXB3-213ENST00000552000 RTFDC1Q9BY42 306 aaPredicted RBP7.17□□□□□ -1.26
HOXB3-213ENST00000552000 VPS33BQ9H267 617 aa7.17□□□□□ -1.26
HOXB3-213ENST00000552000 TOR4AQ9NXH8 423 aa7.17□□□□□ -1.26
HOXB3-213ENST00000552000 ATP6V0A2Q9Y487 856 aa7.17□□□□□ -1.26
HOXB3-213ENST00000552000 MAP3K15Q6ZN16 1313 aa7.17□□□□□ -1.26
HOXB3-213ENST00000552000 COL3A1P02461 1466 aaPredicted RBP7.17□□□□□ -1.26
HOXB3-213ENST00000552000 YDJCA8MPS7 323 aa7.16□□□□□ -1.26
HOXB3-213ENST00000552000 ERVV-1B6SEH8 477 aa7.16□□□□□ -1.26
HOXB3-213ENST00000552000 ADM5C9JUS6 153 aa7.16□□□□□ -1.26
HOXB3-213ENST00000552000 NTSR2O95665 410 aa7.16□□□□□ -1.26
HOXB3-213ENST00000552000 SLC10A3P09131 477 aa7.16□□□□□ -1.26
HOXB3-213ENST00000552000 DCTN1Q14203 1278 aa7.16□□□□□ -1.26
HOXB3-213ENST00000552000 TBC1D10BQ4KMP7 808 aaPredicted RBP7.16□□□□□ -1.26
HOXB3-213ENST00000552000 HABP4Q5JVS0 413 aaKnown RBP7.16□□□□□ -1.26
HOXB3-213ENST00000552000 RBM26Q5T8P6 1007 aaKnown RBP7.16□□□□□ -1.26
HOXB3-213ENST00000552000 KIF6Q6ZMV9 814 aa7.16□□□□□ -1.26
HOXB3-213ENST00000552000 SCUBE3Q8IX30 993 aa7.16□□□□□ -1.26
HOXB3-213ENST00000552000 MPNDQ8N594 471 aa7.16□□□□□ -1.26
HOXB3-213ENST00000552000 RTF1Q92541 710 aaKnown RBP7.16□□□□□ -1.26
HOXB3-213ENST00000552000 GCC1Q96CN9 775 aa7.16□□□□□ -1.26
HOXB3-213ENST00000552000 ZBTB3Q9H5J0 574 aa7.16□□□□□ -1.26
HOXB3-213ENST00000552000 MIS18AQ9NYP9 233 aa7.16□□□□□ -1.26
HOXB3-213ENST00000552000 RRP7AQ9Y3A4 280 aaKnown RBP7.16□□□□□ -1.26
HOXB3-213ENST00000552000 ADGRG1Q9Y653 693 aa7.16□□□□□ -1.26
HOXB3-213ENST00000552000 ABCC4O15439 1325 aa7.16□□□□□ -1.26
HOXB3-213ENST00000552000 IBTKQ9P2D0 1353 aaPredicted RBP7.16□□□□□ -1.26
HOXB3-213ENST00000552000 TTC24A2A3L6 582 aaPredicted RBP7.15□□□□□ -1.26
HOXB3-213ENST00000552000 PSMD14O00487 310 aa7.15□□□□□ -1.26
HOXB3-213ENST00000552000 EGFRP00533 1210 aa7.15□□□□□ -1.26
HOXB3-213ENST00000552000 MYL6BP14649 208 aa7.15□□□□□ -1.26
HOXB3-213ENST00000552000 DCPSQ96C86 337 aaKnown RBP7.15□□□□□ -1.26
HOXB3-213ENST00000552000 NLRP3Q96P20 1036 aa7.15□□□□□ -1.26
HOXB3-213ENST00000552000 HDAC9Q9UKV0 1011 aa7.15□□□□□ -1.26
HOXB3-213ENST00000552000 LAMB4A4D0S4 1761 aa7.15□□□□□ -1.27
HOXB3-213ENST00000552000 FAM181BA6NEQ2 426 aa7.14□□□□□ -1.27
HOXB3-213ENST00000552000 SMCPP49901 116 aaPredicted RBP7.14□□□□□ -1.27
HOXB3-213ENST00000552000 BRCA2P51587 3418 aa7.14□□□□□ -1.27
HOXB3-213ENST00000552000 LAMB2P55268 1798 aa7.14□□□□□ -1.27
HOXB3-213ENST00000552000 TAF7Q15545 349 aaPredicted RBP7.14□□□□□ -1.27
HOXB3-213ENST00000552000 SCN9AQ15858 1988 aa7.14□□□□□ -1.27
HOXB3-213ENST00000552000 PKN2Q16513 984 aaKnown RBP7.14□□□□□ -1.27
HOXB3-213ENST00000552000 PUS10Q3MIT2 529 aaKnown RBP7.14□□□□□ -1.27
HOXB3-213ENST00000552000 PPP1R42Q7Z4L9 355 aa7.14□□□□□ -1.27
HOXB3-213ENST00000552000 SP8Q8IXZ3 490 aa7.14□□□□□ -1.27
HOXB3-213ENST00000552000 ZNF34Q8IZ26 560 aa7.14□□□□□ -1.27
HOXB3-213ENST00000552000 ZNF296Q8WUU4 475 aaPredicted RBP7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms