RNA–Protein interactions for RNA: ENST00000551845.5

PTCH1-225, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 809 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-225ENST00000551845 TTLL5Q6EMB2 1281 aa13.15□□□□□ -0.3
PTCH1-225ENST00000551845 CYP4F22Q6NT55 531 aa13.15□□□□□ -0.3
PTCH1-225ENST00000551845 CEP85Q6P2H3 762 aa13.15□□□□□ -0.3
PTCH1-225ENST00000551845 DPF2Q92785 391 aa13.15□□□□□ -0.3
PTCH1-225ENST00000551845 FAM84BQ96KN1 310 aaPredicted RBP13.15□□□□□ -0.3
PTCH1-225ENST00000551845 CNOT7Q9UIV1 285 aaKnown RBP13.15□□□□□ -0.3
PTCH1-225ENST00000551845 TSKSQ9UJT2 592 aa13.15□□□□□ -0.3
PTCH1-225ENST00000551845 AKAP2Q9Y2D5 859 aa13.15□□□□□ -0.3
PTCH1-225ENST00000551845 ZBTB12Q9Y330 459 aaPredicted RBP13.15□□□□□ -0.3
PTCH1-225ENST00000551845 TAF1P21675 1872 aa13.14□□□□□ -0.31
PTCH1-225ENST00000551845 HMMRO75330 724 aa13.14□□□□□ -0.31
PTCH1-225ENST00000551845 SASH1O94885 1247 aa13.14□□□□□ -0.31
PTCH1-225ENST00000551845 SLC5A1P13866 664 aa13.14□□□□□ -0.31
PTCH1-225ENST00000551845 FGFR2P21802 821 aa13.14□□□□□ -0.31
PTCH1-225ENST00000551845 EPS15P42566 896 aa13.14□□□□□ -0.31
PTCH1-225ENST00000551845 GYG1P46976 350 aa13.14□□□□□ -0.31
PTCH1-225ENST00000551845 GMPSP49915 693 aaPredicted RBP13.14□□□□□ -0.31
PTCH1-225ENST00000551845 SCNN1DP51172 638 aa13.14□□□□□ -0.31
PTCH1-225ENST00000551845 FBXO33Q7Z6M2 555 aa13.14□□□□□ -0.31
PTCH1-225ENST00000551845 AGBL3Q8NEM8 1001 aa13.14□□□□□ -0.31
PTCH1-225ENST00000551845 FBXW7Q969H0 707 aa13.14□□□□□ -0.31
PTCH1-225ENST00000551845 GPRC5DQ9NZD1 345 aa13.14□□□□□ -0.31
PTCH1-225ENST00000551845 SUPT16HQ9Y5B9 1047 aaKnown RBP13.14□□□□□ -0.31
PTCH1-225ENST00000551845 FRAT2O75474 233 aaPredicted RBP13.13□□□□□ -0.31
PTCH1-225ENST00000551845 IL1R1P14778 569 aa13.13□□□□□ -0.31
PTCH1-225ENST00000551845 GTF2IP78347 998 aa13.13□□□□□ -0.31
PTCH1-225ENST00000551845 TFCP2Q12800 502 aa13.13□□□□□ -0.31
PTCH1-225ENST00000551845 ATP2B3Q16720 1220 aa13.13□□□□□ -0.31
PTCH1-225ENST00000551845 RSBN1LQ6PCB5 846 aaPredicted RBP13.13□□□□□ -0.31
PTCH1-225ENST00000551845 NOP58Q9Y2X3 529 aaKnown RBP13.13□□□□□ -0.31
PTCH1-225ENST00000551845 IRS2Q9Y4H2 1338 aa13.13□□□□□ -0.31
PTCH1-225ENST00000551845 BCAMP50895 628 aa13.12□□□□□ -0.31
PTCH1-225ENST00000551845 TIMM10P62072 90 aa13.12□□□□□ -0.31
PTCH1-225ENST00000551845 FMR1Q06787 632 aaKnown RBP eCLIP13.12□□□□□ -0.312e-7■■■■■ 26.8
PTCH1-225ENST00000551845 HSP90AB4PQ58FF6 505 aa13.12□□□□□ -0.31
PTCH1-225ENST00000551845 USP50Q70EL3 339 aaPredicted RBP13.12□□□□□ -0.31
PTCH1-225ENST00000551845 TDRD7Q8NHU6 1098 aaKnown RBP13.12□□□□□ -0.31
PTCH1-225ENST00000551845 NEUROD6Q96NK8 337 aa13.12□□□□□ -0.31
PTCH1-225ENST00000551845 MCOLN1Q9GZU1 580 aa13.12□□□□□ -0.31
PTCH1-225ENST00000551845 ADARB2Q9NS39 739 aaKnown RBP13.12□□□□□ -0.31
PTCH1-225ENST00000551845 GNL3LQ9NVN8 582 aaKnown RBP13.12□□□□□ -0.31
PTCH1-225ENST00000551845 COL4A5P29400 1685 aa13.12□□□□□ -0.31
PTCH1-225ENST00000551845 DUOX1Q9NRD9 1551 aa13.11□□□□□ -0.31
PTCH1-225ENST00000551845 THSD7BQ9C0I4 1608 aa13.11□□□□□ -0.31
PTCH1-225ENST00000551845 AOC2O75106 756 aa13.11□□□□□ -0.31
PTCH1-225ENST00000551845 USP17L8P0C7I0 530 aa13.11□□□□□ -0.31
PTCH1-225ENST00000551845 MMP14P50281 582 aa13.11□□□□□ -0.31
PTCH1-225ENST00000551845 DACT2Q5SW24 774 aa13.11□□□□□ -0.31
PTCH1-225ENST00000551845 OGFOD1Q8N543 542 aa13.11□□□□□ -0.31
PTCH1-225ENST00000551845 MYO3BQ8WXR4 1341 aa13.11□□□□□ -0.31
PTCH1-225ENST00000551845 MYH3P11055 1940 aa13.1□□□□□ -0.31
PTCH1-225ENST00000551845 A0A1B0GUL7 405 aa13.1□□□□□ -0.31
PTCH1-225ENST00000551845 RBM26Q5T8P6 1007 aaKnown RBP13.1□□□□□ -0.31
PTCH1-225ENST00000551845 ERC1Q8IUD2 1116 aa13.1□□□□□ -0.31
PTCH1-225ENST00000551845 MICALL2Q8IY33 904 aa13.1□□□□□ -0.31
PTCH1-225ENST00000551845 LRRC37AA6NMS7 1700 aa13.1□□□□□ -0.31
PTCH1-225ENST00000551845 TRPM7Q96QT4 1865 aa13.1□□□□□ -0.31
PTCH1-225ENST00000551845 MAP2K2P36507 400 aa13.09□□□□□ -0.31
PTCH1-225ENST00000551845 FKBP1AP62942 108 aaKnown RBP13.09□□□□□ -0.31
PTCH1-225ENST00000551845 DGKZQ13574 1117 aa13.09□□□□□ -0.31
PTCH1-225ENST00000551845 AAMPQ13685 434 aa13.09□□□□□ -0.31
PTCH1-225ENST00000551845 GORABQ5T7V8 394 aa13.09□□□□□ -0.31
PTCH1-225ENST00000551845 SIRT2Q8IXJ6 389 aa13.09□□□□□ -0.31
PTCH1-225ENST00000551845 CRBNQ96SW2 442 aa13.09□□□□□ -0.31
PTCH1-225ENST00000551845 GMLQ99445 158 aa13.09□□□□□ -0.31
PTCH1-225ENST00000551845 MXD3Q9BW11 206 aa13.09□□□□□ -0.31
PTCH1-225ENST00000551845 GPR108Q9NPR9 543 aa13.09□□□□□ -0.31
PTCH1-225ENST00000551845 HDAC9Q9UKV0 1011 aa13.09□□□□□ -0.31
PTCH1-225ENST00000551845 IQSEC3Q9UPP2 1182 aaPredicted RBP13.09□□□□□ -0.31
PTCH1-225ENST00000551845 TLL2Q9Y6L7 1015 aa13.09□□□□□ -0.31
PTCH1-225ENST00000551845 TRAF5O00463 557 aa13.08□□□□□ -0.32
PTCH1-225ENST00000551845 CA12O43570 354 aa13.08□□□□□ -0.32
PTCH1-225ENST00000551845 RAB11FIP3O75154 756 aa13.08□□□□□ -0.32
PTCH1-225ENST00000551845 SAMD7Q7Z3H4 446 aa13.08□□□□□ -0.32
PTCH1-225ENST00000551845 ZC3H15Q8WU90 426 aaKnown RBP13.08□□□□□ -0.32
PTCH1-225ENST00000551845 TBC1D22AQ8WUA7 517 aa13.08□□□□□ -0.32
PTCH1-225ENST00000551845 XAGE2Q96GT9 111 aa13.08□□□□□ -0.32
PTCH1-225ENST00000551845 JAG2Q9Y219 1238 aa13.08□□□□□ -0.32
PTCH1-225ENST00000551845 EXOC6BQ9Y2D4 811 aa13.08□□□□□ -0.32
PTCH1-225ENST00000551845 FAM205AQ6ZU69 1335 aa13.08□□□□□ -0.32
PTCH1-225ENST00000551845 CASP8AP2Q9UKL3 1982 aa13.07□□□□□ -0.32
PTCH1-225ENST00000551845 ZNF280AP59817 542 aaPredicted RBP13.07□□□□□ -0.32
PTCH1-225ENST00000551845 CHAF1AQ13111 956 aaPredicted RBP13.07□□□□□ -0.32
PTCH1-225ENST00000551845 TNNI3KQ59H18 835 aa13.07□□□□□ -0.32
PTCH1-225ENST00000551845 MFSD14BQ5SR56 506 aa13.07□□□□□ -0.32
PTCH1-225ENST00000551845 CST9Q5W186 159 aa13.07□□□□□ -0.32
PTCH1-225ENST00000551845 CCDC102BQ68D86 513 aa13.07□□□□□ -0.32
PTCH1-225ENST00000551845 KIAA0825Q8IV33 1275 aa13.07□□□□□ -0.32
PTCH1-225ENST00000551845 WDR66Q8TBY9 1149 aa13.07□□□□□ -0.32
PTCH1-225ENST00000551845 DENND2AQ9ULE3 1009 aa13.07□□□□□ -0.32
PTCH1-225ENST00000551845 FPGT-TNNI3KV9GXZ4 949 aa13.07□□□□□ -0.32
PTCH1-225ENST00000551845 LTBP1Q14766 1721 aa13.07□□□□□ -0.32
PTCH1-225ENST00000551845 SHTN1A0MZ66 631 aa13.06□□□□□ -0.32
PTCH1-225ENST00000551845 SEMA3EO15041 775 aa13.06□□□□□ -0.32
PTCH1-225ENST00000551845 ADORA1P30542 326 aa13.06□□□□□ -0.32
PTCH1-225ENST00000551845 HIRAP54198 1017 aaPredicted RBP13.06□□□□□ -0.32
PTCH1-225ENST00000551845 TBC1D10BQ4KMP7 808 aaPredicted RBP13.06□□□□□ -0.32
PTCH1-225ENST00000551845 CCDC158Q5M9N0 1113 aa13.06□□□□□ -0.32
PTCH1-225ENST00000551845 RHPN1Q8TCX5 695 aa13.06□□□□□ -0.32
PTCH1-225ENST00000551845 KIF1BPQ96EK5 621 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms