RNA–Protein interactions for RNA: ENST00000551551.1

ATXN2-223, Transcript of ataxin 2, human

TSL 2

Gene ATXN2, Length 1,256 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATXN2-223	ENST00000551551	CTCF	P49711	727 aa	Predicted RBP	11.25	□□□□□ -0.61
ATXN2-223	ENST00000551551	HIRA	P54198	1017 aa	Predicted RBP	11.25	□□□□□ -0.61
ATXN2-223	ENST00000551551	PUM3	Q15397	648 aa	Known RBP	11.25	□□□□□ -0.61
ATXN2-223	ENST00000551551	DLGAP5	Q15398	846 aa		11.25	□□□□□ -0.61
ATXN2-223	ENST00000551551	SUPT20HL1	Q3ZLR7	823 aa		11.25	□□□□□ -0.61
ATXN2-223	ENST00000551551	RBM26	Q5T8P6	1007 aa	Known RBP	11.25	□□□□□ -0.61
ATXN2-223	ENST00000551551	CST9	Q5W186	159 aa		11.25	□□□□□ -0.61
ATXN2-223	ENST00000551551	ZKSCAN2	Q63HK3	967 aa		11.25	□□□□□ -0.61
ATXN2-223	ENST00000551551	USP48	Q86UV5	1035 aa		11.25	□□□□□ -0.61
ATXN2-223	ENST00000551551	ZGPAT	Q8N5A5	531 aa	Known RBP	11.25	□□□□□ -0.61
ATXN2-223	ENST00000551551	LPIN2	Q92539	896 aa		11.25	□□□□□ -0.61
ATXN2-223	ENST00000551551	SUCLG2	Q96I99	432 aa		11.25	□□□□□ -0.61
ATXN2-223	ENST00000551551	GPR101	Q96P66	508 aa	Predicted RBP	11.25	□□□□□ -0.61
ATXN2-223	ENST00000551551	PRDM10	Q9NQV6	1147 aa		11.25	□□□□□ -0.61
ATXN2-223	ENST00000551551	MAST3	O60307	1309 aa		11.25	□□□□□ -0.61
ATXN2-223	ENST00000551551	FAM205A	Q6ZU69	1335 aa		11.25	□□□□□ -0.61
ATXN2-223	ENST00000551551	WDR33	Q9C0J8	1336 aa	Known RBP	11.25	□□□□□ -0.61
ATXN2-223	ENST00000551551	EYA2	O00167	538 aa		11.24	□□□□□ -0.61
ATXN2-223	ENST00000551551	SEMA3E	O15041	775 aa		11.24	□□□□□ -0.61
ATXN2-223	ENST00000551551	PLIN1	O60240	522 aa		11.24	□□□□□ -0.61
ATXN2-223	ENST00000551551	TAF5L	O75529	589 aa		11.24	□□□□□ -0.61
ATXN2-223	ENST00000551551	SLC5A1	P13866	664 aa		11.24	□□□□□ -0.61
ATXN2-223	ENST00000551551	VEGFB	P49765	207 aa		11.24	□□□□□ -0.61
ATXN2-223	ENST00000551551	IFNLR1	Q8IU57	520 aa	Predicted RBP	11.24	□□□□□ -0.61
ATXN2-223	ENST00000551551	TDRD7	Q8NHU6	1098 aa	Known RBP	11.24	□□□□□ -0.61
ATXN2-223	ENST00000551551	FBXW7	Q969H0	707 aa		11.24	□□□□□ -0.61
ATXN2-223	ENST00000551551	GBA2	Q9HCG7	927 aa	Predicted RBP	11.24	□□□□□ -0.61
ATXN2-223	ENST00000551551	KCNQ5	Q9NR82	932 aa		11.24	□□□□□ -0.61
ATXN2-223	ENST00000551551	MKRN1	Q9UHC7	482 aa	Known RBP	11.24	□□□□□ -0.61
ATXN2-223	ENST00000551551	SERPINA10	Q9UK55	444 aa		11.24	□□□□□ -0.61
ATXN2-223	ENST00000551551	ZBED9	Q6R2W3	1325 aa		11.24	□□□□□ -0.61
ATXN2-223	ENST00000551551	DUOX1	Q9NRD9	1551 aa		11.24	□□□□□ -0.61
ATXN2-223	ENST00000551551	COL4A5	P29400	1685 aa		11.24	□□□□□ -0.61
ATXN2-223	ENST00000551551	PPP1R12B	O60237	982 aa	Predicted RBP	11.23	□□□□□ -0.61
ATXN2-223	ENST00000551551	GNAI2	P04899	355 aa		11.23	□□□□□ -0.61
ATXN2-223	ENST00000551551	EPHA10	Q5JZY3	1008 aa		11.23	□□□□□ -0.61
ATXN2-223	ENST00000551551	FBXO33	Q7Z6M2	555 aa		11.23	□□□□□ -0.61
ATXN2-223	ENST00000551551	SLF2	Q8IX21	1173 aa		11.23	□□□□□ -0.61
ATXN2-223	ENST00000551551	WDR66	Q8TBY9	1149 aa		11.23	□□□□□ -0.61
ATXN2-223	ENST00000551551	TRPM4	Q8TD43	1214 aa		11.23	□□□□□ -0.61
ATXN2-223	ENST00000551551	KAZALD1	Q96I82	304 aa		11.23	□□□□□ -0.61
ATXN2-223	ENST00000551551	CAPNS2	Q96L46	248 aa		11.23	□□□□□ -0.61
ATXN2-223	ENST00000551551	GLIS2	Q9BZE0	524 aa	Predicted RBP	11.23	□□□□□ -0.61
ATXN2-223	ENST00000551551	COPRS	Q9NQ92	184 aa		11.23	□□□□□ -0.61
ATXN2-223	ENST00000551551	ADAMTSL1	Q8N6G6	1762 aa		11.23	□□□□□ -0.61
ATXN2-223	ENST00000551551	WNT10B	O00744	389 aa		11.22	□□□□□ -0.61
ATXN2-223	ENST00000551551	TNNI2	P48788	182 aa		11.22	□□□□□ -0.61
ATXN2-223	ENST00000551551	HUNK	P57058	714 aa		11.22	□□□□□ -0.61
ATXN2-223	ENST00000551551	INHBE	P58166	350 aa		11.22	□□□□□ -0.61
ATXN2-223	ENST00000551551	MTX1	Q13505	466 aa		11.22	□□□□□ -0.61
ATXN2-223	ENST00000551551	LTBP1	Q14766	1721 aa		11.22	□□□□□ -0.61
ATXN2-223	ENST00000551551	ANGEL2	Q5VTE6	544 aa	Known RBP	11.22	□□□□□ -0.61
ATXN2-223	ENST00000551551	RGMB	Q6NW40	437 aa		11.22	□□□□□ -0.61
ATXN2-223	ENST00000551551	ARMC9	Q7Z3E5	817 aa		11.22	□□□□□ -0.61
ATXN2-223	ENST00000551551	FTSJ3	Q8IY81	847 aa	Known RBP	11.22	□□□□□ -0.61
ATXN2-223	ENST00000551551	HELB	Q8NG08	1087 aa	Predicted RBP	11.22	□□□□□ -0.61
ATXN2-223	ENST00000551551	FAM84B	Q96KN1	310 aa	Predicted RBP	11.22	□□□□□ -0.61
ATXN2-223	ENST00000551551	WBP1L	Q9NX94	342 aa		11.22	□□□□□ -0.61
ATXN2-223	ENST00000551551	GGA3	Q9NZ52	723 aa		11.22	□□□□□ -0.61
ATXN2-223	ENST00000551551	TAF1	P21675	1872 aa		11.21	□□□□□ -0.61
ATXN2-223	ENST00000551551	HSPA1A	P0DMV8	641 aa	Known RBP	11.21	□□□□□ -0.61
ATXN2-223	ENST00000551551	HSPA1B	P0DMV9	641 aa	Known RBP	11.21	□□□□□ -0.61
ATXN2-223	ENST00000551551	HTRA3	P83110	453 aa		11.21	□□□□□ -0.61
ATXN2-223	ENST00000551551	MFSD14B	Q5SR56	506 aa		11.21	□□□□□ -0.61
ATXN2-223	ENST00000551551	TXNRD3	Q86VQ6	643 aa		11.21	□□□□□ -0.61
ATXN2-223	ENST00000551551	KIAA0825	Q8IV33	1275 aa		11.21	□□□□□ -0.61
ATXN2-223	ENST00000551551	ANKRD44	Q8N8A2	993 aa		11.21	□□□□□ -0.61
ATXN2-223	ENST00000551551	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	11.21	□□□□□ -0.61
ATXN2-223	ENST00000551551	FRAT1	Q92837	279 aa	Predicted RBP	11.21	□□□□□ -0.61
ATXN2-223	ENST00000551551	ZNF594	Q96JF6	807 aa	Predicted RBP	11.21	□□□□□ -0.61
ATXN2-223	ENST00000551551	COL1A1	P02452	1464 aa	Predicted RBP	11.2	□□□□□ -0.62
ATXN2-223	ENST00000551551	TRAF5	O00463	557 aa		11.2	□□□□□ -0.62
ATXN2-223	ENST00000551551	ZNF157	P51786	506 aa	Predicted RBP	11.2	□□□□□ -0.62
ATXN2-223	ENST00000551551	RBM5	P52756	815 aa	Known RBP eCLIP	11.2	□□□□□ -0.62
ATXN2-223	ENST00000551551	PTPN12	Q05209	780 aa	Known RBP	11.2	□□□□□ -0.62
ATXN2-223	ENST00000551551	TMEM132A	Q24JP5	1023 aa		11.2	□□□□□ -0.62
ATXN2-223	ENST00000551551	FKBP1C	Q5VVH2	108 aa		11.2	□□□□□ -0.62
ATXN2-223	ENST00000551551	SPTY2D1	Q68D10	685 aa	Predicted RBP	11.2	□□□□□ -0.62
ATXN2-223	ENST00000551551	TMED8	Q6PL24	325 aa	Predicted RBP	11.2	□□□□□ -0.62
ATXN2-223	ENST00000551551	PIP4P2	Q8N4L2	257 aa		11.2	□□□□□ -0.62
ATXN2-223	ENST00000551551	SP7	Q8TDD2	431 aa	Predicted RBP	11.2	□□□□□ -0.62
ATXN2-223	ENST00000551551	ZNF408	Q9H9D4	720 aa		11.2	□□□□□ -0.62
ATXN2-223	ENST00000551551	TMOD2	Q9NZR1	351 aa		11.2	□□□□□ -0.62
ATXN2-223	ENST00000551551	DENND2A	Q9ULE3	1009 aa		11.2	□□□□□ -0.62
ATXN2-223	ENST00000551551	SRGAP3	O43295	1099 aa		11.19	□□□□□ -0.62
ATXN2-223	ENST00000551551	MAP4K4	O95819	1239 aa	Predicted RBP	11.19	□□□□□ -0.62
ATXN2-223	ENST00000551551	TRIM27	P14373	513 aa		11.19	□□□□□ -0.62
ATXN2-223	ENST00000551551	G3BP1	Q13283	466 aa	Known RBP eCLIP	11.19	□□□□□ -0.62
ATXN2-223	ENST00000551551	MVP	Q14764	893 aa	Known RBP	11.19	□□□□□ -0.62
ATXN2-223	ENST00000551551	HSP90AB4P	Q58FF6	505 aa		11.19	□□□□□ -0.62
ATXN2-223	ENST00000551551	HHIPL2	Q6UWX4	724 aa		11.19	□□□□□ -0.62
ATXN2-223	ENST00000551551	DZIP1L	Q8IYY4	767 aa	Known RBP	11.19	□□□□□ -0.62
ATXN2-223	ENST00000551551	VGLL2	Q8N8G2	317 aa		11.19	□□□□□ -0.62
ATXN2-223	ENST00000551551	TEKT1	Q969V4	418 aa		11.19	□□□□□ -0.62
ATXN2-223	ENST00000551551	TSHZ2	Q9NRE2	1034 aa		11.19	□□□□□ -0.62
ATXN2-223	ENST00000551551	SAGE1	Q9NXZ1	904 aa		11.19	□□□□□ -0.62
ATXN2-223	ENST00000551551	IRS2	Q9Y4H2	1338 aa		11.18	□□□□□ -0.62
ATXN2-223	ENST00000551551	SPDYE2B	A6NHP3	402 aa		11.18	□□□□□ -0.62
ATXN2-223	ENST00000551551	SPDYE6	P0CI01	402 aa		11.18	□□□□□ -0.62
ATXN2-223	ENST00000551551	FGFR2	P21802	821 aa		11.18	□□□□□ -0.62

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