RNA–Protein interactions for RNA: ENST00000550589.1

CCDC59-204, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-204ENST00000550589 DDX21Q9NR30 783 aaKnown RBP eCLIP5.26□□□□□ -1.57
CCDC59-204ENST00000550589 DCCP43146 1447 aa5.26□□□□□ -1.57
CCDC59-204ENST00000550589 ZNF142P52746 1687 aaPredicted RBP5.26□□□□□ -1.57
CCDC59-204ENST00000550589 CHD2O14647 1828 aaKnown RBP5.26□□□□□ -1.57
CCDC59-204ENST00000550589 IFIT2P09913 472 aaKnown RBP5.26□□□□□ -1.57
CCDC59-204ENST00000550589 NCLP19338 710 aaKnown RBP5.26□□□□□ -1.57
CCDC59-204ENST00000550589 G3BP1Q13283 466 aaKnown RBP eCLIP5.26□□□□□ -1.57
CCDC59-204ENST00000550589 HPS1Q92902 700 aa5.26□□□□□ -1.57
CCDC59-204ENST00000550589 LGR6Q9HBX8 967 aa5.26□□□□□ -1.57
CCDC59-204ENST00000550589 NLRP2Q9NX02 1062 aa5.26□□□□□ -1.57
CCDC59-204ENST00000550589 DACH1Q9UI36 760 aa5.26□□□□□ -1.57
CCDC59-204ENST00000550589 FKBPLQ9UIM3 349 aa5.26□□□□□ -1.57
CCDC59-204ENST00000550589 TLL2Q9Y6L7 1015 aa5.26□□□□□ -1.57
CCDC59-204ENST00000550589 MST1RQ04912 1400 aa5.25□□□□□ -1.57
CCDC59-204ENST00000550589 TTC24A2A3L6 582 aaPredicted RBP5.25□□□□□ -1.57
CCDC59-204ENST00000550589 CHMLP26374 656 aa5.25□□□□□ -1.57
CCDC59-204ENST00000550589 VARSP26640 1264 aaKnown RBP5.25□□□□□ -1.57
CCDC59-204ENST00000550589 NEK4P51957 841 aa5.25□□□□□ -1.57
CCDC59-204ENST00000550589 ZNF790Q6PG37 636 aa5.25□□□□□ -1.57
CCDC59-204ENST00000550589 MTMR14Q8NCE2 650 aa5.25□□□□□ -1.57
CCDC59-204ENST00000550589 DCAF5Q96JK2 942 aa5.25□□□□□ -1.57
CCDC59-204ENST00000550589 C1QTNF2Q9BXJ5 285 aa5.25□□□□□ -1.57
CCDC59-204ENST00000550589 MAP3K2Q9Y2U5 619 aa5.25□□□□□ -1.57
CCDC59-204ENST00000550589 ATP6V1DQ9Y5K8 247 aa5.25□□□□□ -1.57
CCDC59-204ENST00000550589 DDX49Q9Y6V7 483 aaKnown RBP5.25□□□□□ -1.57
CCDC59-204ENST00000550589 LMTK3Q96Q04 1460 aa5.25□□□□□ -1.57
CCDC59-204ENST00000550589 NFAT5O94916 1531 aa5.25□□□□□ -1.57
CCDC59-204ENST00000550589 ALDH1A1P00352 501 aa5.24□□□□□ -1.57
CCDC59-204ENST00000550589 SNRPA1P09661 255 aaKnown RBP5.24□□□□□ -1.57
CCDC59-204ENST00000550589 ZKSCAN1P17029 563 aaPredicted RBP5.24□□□□□ -1.57
CCDC59-204ENST00000550589 KLHL40Q2TBA0 621 aa5.24□□□□□ -1.57
CCDC59-204ENST00000550589 OTUD7AQ8TE49 926 aaPredicted RBP5.24□□□□□ -1.57
CCDC59-204ENST00000550589 LRRC59Q96AG4 307 aaKnown RBP5.24□□□□□ -1.57
CCDC59-204ENST00000550589 TRIM44Q96DX7 344 aaPredicted RBP5.24□□□□□ -1.57
CCDC59-204ENST00000550589 KRTAP9-8Q9BYQ0 159 aa5.24□□□□□ -1.57
CCDC59-204ENST00000550589 SLC52A2Q9HAB3 445 aa5.24□□□□□ -1.57
CCDC59-204ENST00000550589 DIAPH3Q9NSV4 1193 aa5.24□□□□□ -1.57
CCDC59-204ENST00000550589 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.24□□□□□ -1.57
CCDC59-204ENST00000550589 C1orf167Q5SNV9 1468 aa5.24□□□□□ -1.57
CCDC59-204ENST00000550589 NWD1Q149M9 1564 aa5.24□□□□□ -1.57
CCDC59-204ENST00000550589 CACNA1FO60840 1977 aa5.24□□□□□ -1.57
CCDC59-204ENST00000550589 LRRC37A3O60309 1634 aa5.24□□□□□ -1.57
CCDC59-204ENST00000550589 PHRF1Q9P1Y6 1649 aaKnown RBP5.24□□□□□ -1.57
CCDC59-204ENST00000550589 GRM8O00222 908 aa5.24□□□□□ -1.57
CCDC59-204ENST00000550589 NBPF7P0C2Y1 421 aaPredicted RBP5.24□□□□□ -1.57
CCDC59-204ENST00000550589 GRM5P41594 1212 aa5.24□□□□□ -1.57
CCDC59-204ENST00000550589 RNF20Q5VTR2 975 aa5.24□□□□□ -1.57
CCDC59-204ENST00000550589 MPNDQ8N594 471 aa5.24□□□□□ -1.57
CCDC59-204ENST00000550589 BANK1Q8NDB2 785 aa5.24□□□□□ -1.57
CCDC59-204ENST00000550589 SYAP1Q96A49 352 aaPredicted RBP5.24□□□□□ -1.57
CCDC59-204ENST00000550589 EVI5LQ96CN4 794 aa5.24□□□□□ -1.57
CCDC59-204ENST00000550589 FMNL2Q96PY5 1086 aa5.24□□□□□ -1.57
CCDC59-204ENST00000550589 CDK15Q96Q40 435 aa5.24□□□□□ -1.57
CCDC59-204ENST00000550589 IL1RAPL2Q9NP60 686 aa5.24□□□□□ -1.57
CCDC59-204ENST00000550589 ECHDC1Q9NTX5 307 aa5.24□□□□□ -1.57
CCDC59-204ENST00000550589 SLIT3O75094 1523 aa5.24□□□□□ -1.57
CCDC59-204ENST00000550589 SALL3Q9BXA9 1300 aa5.24□□□□□ -1.57
CCDC59-204ENST00000550589 KIF1AQ12756 1690 aa5.23□□□□□ -1.57
CCDC59-204ENST00000550589 MBD3O95983 291 aa5.23□□□□□ -1.57
CCDC59-204ENST00000550589 PSMA5P28066 241 aa5.23□□□□□ -1.57
CCDC59-204ENST00000550589 ZC3H6P61129 1189 aaKnown RBP5.23□□□□□ -1.57
CCDC59-204ENST00000550589 XPCQ01831 940 aaPredicted RBP5.23□□□□□ -1.57
CCDC59-204ENST00000550589 PDXDC2PQ6P474 469 aa5.23□□□□□ -1.57
CCDC59-204ENST00000550589 TICAM2Q86XR7 235 aa5.23□□□□□ -1.57
CCDC59-204ENST00000550589 FAM43AQ8N2R8 423 aa5.23□□□□□ -1.57
CCDC59-204ENST00000550589 ARMC2Q8NEN0 867 aa5.23□□□□□ -1.57
CCDC59-204ENST00000550589 KIFC2Q96AC6 838 aa5.23□□□□□ -1.57
CCDC59-204ENST00000550589 IL17RAQ96F46 866 aa5.23□□□□□ -1.57
CCDC59-204ENST00000550589 GZF1Q9H116 711 aaPredicted RBP5.23□□□□□ -1.57
CCDC59-204ENST00000550589 ERBB4Q15303 1308 aa5.23□□□□□ -1.57
CCDC59-204ENST00000550589 USP42Q9H9J4 1324 aaKnown RBP5.23□□□□□ -1.57
CCDC59-204ENST00000550589 HEG1Q9ULI3 1381 aa5.23□□□□□ -1.57
CCDC59-204ENST00000550589 RGPD8O14715 1765 aaPredicted RBP5.23□□□□□ -1.57
CCDC59-204ENST00000550589 FSD2A1L4K1 749 aa5.23□□□□□ -1.57
CCDC59-204ENST00000550589 BAG4O95429 457 aaKnown RBP5.23□□□□□ -1.57
CCDC59-204ENST00000550589 PHKG2P15735 406 aa5.23□□□□□ -1.57
CCDC59-204ENST00000550589 HSPA4P34932 840 aa5.23□□□□□ -1.57
CCDC59-204ENST00000550589 CABP4P57796 275 aa5.23□□□□□ -1.57
CCDC59-204ENST00000550589 BPHLQ86WA6 291 aaPredicted RBP5.23□□□□□ -1.57
CCDC59-204ENST00000550589 CHMP4CQ96CF2 233 aa5.23□□□□□ -1.57
CCDC59-204ENST00000550589 TMX3Q96JJ7 454 aa5.23□□□□□ -1.57
CCDC59-204ENST00000550589 ZSCAN31Q96LW9 406 aaPredicted RBP5.23□□□□□ -1.57
CCDC59-204ENST00000550589 GRPEL1Q9HAV7 217 aa5.23□□□□□ -1.57
CCDC59-204ENST00000550589 UTYO14607 1347 aa5.23□□□□□ -1.57
CCDC59-204ENST00000550589 ADAMTSL3P82987 1691 aa5.22□□□□□ -1.57
CCDC59-204ENST00000550589 SGSM2O43147 1006 aa5.22□□□□□ -1.57
CCDC59-204ENST00000550589 KCNJ4P48050 445 aa5.22□□□□□ -1.57
CCDC59-204ENST00000550589 SMCPP49901 116 aaPredicted RBP5.22□□□□□ -1.57
CCDC59-204ENST00000550589 AIMP1Q12904 312 aaKnown RBP5.22□□□□□ -1.57
CCDC59-204ENST00000550589 ANKRD1Q15327 319 aa5.22□□□□□ -1.57
CCDC59-204ENST00000550589 LRRFIP1Q32MZ4 808 aaKnown RBP5.22□□□□□ -1.57
CCDC59-204ENST00000550589 NBPF14Q5TI25 921 aa5.22□□□□□ -1.57
CCDC59-204ENST00000550589 MCTP1Q6DN14 999 aa5.22□□□□□ -1.57
CCDC59-204ENST00000550589 NFATC2IPQ8NCF5 419 aa5.22□□□□□ -1.57
CCDC59-204ENST00000550589 GPKOWQ92917 476 aaPredicted RBP eCLIP5.22□□□□□ -1.57
CCDC59-204ENST00000550589 METTL22Q9BUU2 404 aaPredicted RBP5.22□□□□□ -1.57
CCDC59-204ENST00000550589 KLF16Q9BXK1 252 aaPredicted RBP5.22□□□□□ -1.57
CCDC59-204ENST00000550589 RAD50Q92878 1312 aa5.22□□□□□ -1.57
CCDC59-204ENST00000550589 WDR33Q9C0J8 1336 aaKnown RBP5.22□□□□□ -1.57
CCDC59-204ENST00000550589 TMEM94Q12767 1356 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms