RNA–Protein interactions for RNA: ENST00000550457.1

CCNT1-203, Transcript of cyclin T1, humanhuman

TSL 3

Gene CCNT1, Length 351 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-203ENST00000550457 PAX4O43316 350 aa5.67□□□□□ -1.5
CCNT1-203ENST00000550457 DLGAP3O95886 979 aa5.67□□□□□ -1.5
CCNT1-203ENST00000550457 RPLP1P05386 114 aaKnown RBP5.67□□□□□ -1.5
CCNT1-203ENST00000550457 MZF1P28698 734 aaPredicted RBP5.67□□□□□ -1.5
CCNT1-203ENST00000550457 HOXA10P31260 410 aaPredicted RBP5.67□□□□□ -1.5
CCNT1-203ENST00000550457 GRIK1P39086 918 aa5.67□□□□□ -1.5
CCNT1-203ENST00000550457 C19orf57Q0VDD7 668 aa5.67□□□□□ -1.5
CCNT1-203ENST00000550457 MTMR3Q13615 1198 aa5.67□□□□□ -1.5
CCNT1-203ENST00000550457 TMEM102Q8N9M5 508 aaPredicted RBP5.67□□□□□ -1.5
CCNT1-203ENST00000550457 GTF3C2Q8WUA4 911 aaPredicted RBP5.67□□□□□ -1.5
CCNT1-203ENST00000550457 MEGF11A6BM72 1044 aa5.66□□□□□ -1.5
CCNT1-203ENST00000550457 WDR64B1ANS9 1081 aa5.66□□□□□ -1.5
CCNT1-203ENST00000550457 EREGO14944 169 aa5.66□□□□□ -1.5
CCNT1-203ENST00000550457 SGO2Q562F6 1265 aa5.66□□□□□ -1.5
CCNT1-203ENST00000550457 FDX2Q6P4F2 183 aa5.66□□□□□ -1.5
CCNT1-203ENST00000550457 SHISA5Q8N114 240 aa5.66□□□□□ -1.5
CCNT1-203ENST00000550457 MFSD14AQ96MC6 490 aa5.66□□□□□ -1.5
CCNT1-203ENST00000550457 OSMRQ99650 979 aa5.66□□□□□ -1.5
CCNT1-203ENST00000550457 POLIQ9UNA4 740 aa5.66□□□□□ -1.5
CCNT1-203ENST00000550457 HIF3AQ9Y2N7 669 aa5.66□□□□□ -1.5
CCNT1-203ENST00000550457 LOC100289279A0A1B0GTE1 492 aa5.65□□□□□ -1.5
CCNT1-203ENST00000550457 PCSK2P16519 638 aa5.65□□□□□ -1.5
CCNT1-203ENST00000550457 MAP4P27816 1152 aaKnown RBP5.65□□□□□ -1.5
CCNT1-203ENST00000550457 BSNDQ8WZ55 320 aa5.65□□□□□ -1.5
CCNT1-203ENST00000550457 PMEPA1Q969W9 287 aa5.65□□□□□ -1.5
CCNT1-203ENST00000550457 TMPRSS13Q9BYE2 586 aa5.65□□□□□ -1.5
CCNT1-203ENST00000550457 LATS2Q9NRM7 1088 aa5.65□□□□□ -1.5
CCNT1-203ENST00000550457 FOXD3Q9UJU5 478 aaPredicted RBP5.65□□□□□ -1.5
CCNT1-203ENST00000550457 GAS2O43903 313 aaKnown RBP5.64□□□□□ -1.51
CCNT1-203ENST00000550457 TNFRSF21O75509 655 aa5.64□□□□□ -1.51
CCNT1-203ENST00000550457 TIAF1O95411 115 aa5.64□□□□□ -1.51
CCNT1-203ENST00000550457 SSFA2P28290 1259 aa5.64□□□□□ -1.51
CCNT1-203ENST00000550457 IKBKEQ14164 716 aa5.64□□□□□ -1.51
CCNT1-203ENST00000550457 CCDC97Q96F63 343 aaPredicted RBP5.64□□□□□ -1.51
CCNT1-203ENST00000550457 USP26Q9BXU7 913 aa5.64□□□□□ -1.51
CCNT1-203ENST00000550457 TMEM88BA6NKF7 163 aa5.63□□□□□ -1.51
CCNT1-203ENST00000550457 PHACTR2O75167 634 aa5.63□□□□□ -1.51
CCNT1-203ENST00000550457 WNT11O96014 354 aa5.63□□□□□ -1.51
CCNT1-203ENST00000550457 F13BP05160 661 aa5.63□□□□□ -1.51
CCNT1-203ENST00000550457 ESRRAP11474 423 aaPredicted RBP5.63□□□□□ -1.51
CCNT1-203ENST00000550457 DRD2P14416 443 aa5.63□□□□□ -1.51
CCNT1-203ENST00000550457 ARL4DP49703 201 aa5.63□□□□□ -1.51
CCNT1-203ENST00000550457 PEAR1Q5VY43 1037 aaPredicted RBP5.63□□□□□ -1.51
CCNT1-203ENST00000550457 NUTM2GQ5VZR2 741 aa5.63□□□□□ -1.51
CCNT1-203ENST00000550457 C12orf50Q8NA57 414 aaPredicted RBP5.63□□□□□ -1.51
CCNT1-203ENST00000550457 SMG8Q8ND04 991 aaKnown RBP5.63□□□□□ -1.51
CCNT1-203ENST00000550457 KRTAP4-7Q9BYR0 210 aa5.63□□□□□ -1.51
CCNT1-203ENST00000550457 BHLHE41Q9C0J9 482 aaPredicted RBP5.63□□□□□ -1.51
CCNT1-203ENST00000550457 SUGCTQ9HAC7 445 aa5.63□□□□□ -1.51
CCNT1-203ENST00000550457 PIM2Q9P1W9 311 aa5.63□□□□□ -1.51
CCNT1-203ENST00000550457 ADGRE2Q9UHX3 823 aa5.63□□□□□ -1.51
CCNT1-203ENST00000550457 SERPINA10Q9UK55 444 aa5.63□□□□□ -1.51
CCNT1-203ENST00000550457 ARID3CA6NKF2 412 aa5.62□□□□□ -1.51
CCNT1-203ENST00000550457 METTL12A8MUP2 240 aa5.62□□□□□ -1.51
CCNT1-203ENST00000550457 FZD6O60353 706 aa5.62□□□□□ -1.51
CCNT1-203ENST00000550457 EDN3P14138 238 aa5.62□□□□□ -1.51
CCNT1-203ENST00000550457 NPR3P17342 541 aa5.62□□□□□ -1.51
CCNT1-203ENST00000550457 TXKP42681 527 aa5.62□□□□□ -1.51
CCNT1-203ENST00000550457 NFXL1Q6ZNB6 911 aa5.62□□□□□ -1.51
CCNT1-203ENST00000550457 FBXL6Q8N531 539 aa5.62□□□□□ -1.51
CCNT1-203ENST00000550457 TTC16Q8NEE8 873 aa5.62□□□□□ -1.51
CCNT1-203ENST00000550457 SNX29Q8TEQ0 813 aa5.62□□□□□ -1.51
CCNT1-203ENST00000550457 SOX17Q9H6I2 414 aaPredicted RBP5.62□□□□□ -1.51
CCNT1-203ENST00000550457 RXRBP28702 533 aa5.61□□□□□ -1.51
CCNT1-203ENST00000550457 MSMPQ1L6U9 139 aa5.61□□□□□ -1.51
CCNT1-203ENST00000550457 ALKBH2Q6NS38 261 aa5.61□□□□□ -1.51
CCNT1-203ENST00000550457 PHLDB3Q6NSJ2 640 aa5.61□□□□□ -1.51
CCNT1-203ENST00000550457 CDPF1Q6NVV7 123 aa5.61□□□□□ -1.51
CCNT1-203ENST00000550457 C2CD4AQ8NCU7 369 aaPredicted RBP5.61□□□□□ -1.51
CCNT1-203ENST00000550457 ASAP3Q8TDY4 903 aa5.61□□□□□ -1.51
CCNT1-203ENST00000550457 NRSN2Q9GZP1 204 aa5.61□□□□□ -1.51
CCNT1-203ENST00000550457 RNF114Q9Y508 228 aa5.61□□□□□ -1.51
CCNT1-203ENST00000550457 POLR3DP05423 398 aaPredicted RBP5.6□□□□□ -1.51
CCNT1-203ENST00000550457 ADMP35318 185 aa5.6□□□□□ -1.51
CCNT1-203ENST00000550457 GSTM4Q03013 218 aa5.6□□□□□ -1.51
CCNT1-203ENST00000550457 ABI1Q8IZP0 508 aa5.6□□□□□ -1.51
CCNT1-203ENST00000550457 FBLIM1Q8WUP2 373 aa5.6□□□□□ -1.51
CCNT1-203ENST00000550457 CYP4F12Q9HCS2 524 aa5.6□□□□□ -1.51
CCNT1-203ENST00000550457 ATG3Q9NT62 314 aa5.6□□□□□ -1.51
CCNT1-203ENST00000550457 CCDC87Q9NVE4 849 aa5.6□□□□□ -1.51
CCNT1-203ENST00000550457 LEMD3Q9Y2U8 911 aa5.6□□□□□ -1.51
CCNT1-203ENST00000550457 FAM95CA0A1B0GW59 222 aa5.59□□□□□ -1.51
CCNT1-203ENST00000550457 FOSL1P15407 271 aa5.59□□□□□ -1.51
CCNT1-203ENST00000550457 AAMPQ13685 434 aa5.59□□□□□ -1.51
CCNT1-203ENST00000550457 EXOSC6Q5RKV6 272 aaKnown RBP5.59□□□□□ -1.51
CCNT1-203ENST00000550457 LCE1DQ5T752 114 aa5.59□□□□□ -1.51
CCNT1-203ENST00000550457 GJD3Q8N144 294 aa5.59□□□□□ -1.51
CCNT1-203ENST00000550457 ZFYVE28Q9HCC9 887 aa5.59□□□□□ -1.51
CCNT1-203ENST00000550457 CARNS1A5YM72 827 aa5.58□□□□□ -1.52
CCNT1-203ENST00000550457 FAM13AO94988 1023 aa5.58□□□□□ -1.52
CCNT1-203ENST00000550457 CTSBP07858 339 aa5.58□□□□□ -1.52
CCNT1-203ENST00000550457 SOX4Q06945 474 aaPredicted RBP5.58□□□□□ -1.52
CCNT1-203ENST00000550457 NFKBIBQ15653 356 aa5.58□□□□□ -1.52
CCNT1-203ENST00000550457 ZNF423Q2M1K9 1284 aa5.58□□□□□ -1.52
CCNT1-203ENST00000550457 PAOXQ6QHF9 649 aa5.58□□□□□ -1.52
CCNT1-203ENST00000550457 GATA6Q92908 595 aa5.58□□□□□ -1.52
CCNT1-203ENST00000550457 OSBPL1AQ9BXW6 950 aa5.58□□□□□ -1.52
CCNT1-203ENST00000550457 ANO2Q9NQ90 1003 aa5.58□□□□□ -1.52
CCNT1-203ENST00000550457 AMOTL2Q9Y2J4 779 aa5.58□□□□□ -1.52
CCNT1-203ENST00000550457 A0A1W2PP55 124 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms