RNA–Protein interactions for RNA: ENST00000550436.4

SVOP-203, Transcript of SV2 related protein, humanhuman

TSL 4

Gene SVOP, Length 695 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVOP-203ENST00000550436 IFNL1Q8IU54 200 aa19.25■□□□□ 0.67
SVOP-203ENST00000550436 ECM29Q5VYK3 1845 aa19.24■□□□□ 0.67
SVOP-203ENST00000550436 POTEFA5A3E0 1075 aa19.24■□□□□ 0.67
SVOP-203ENST00000550436 GJA5P36382 358 aa19.24■□□□□ 0.67
SVOP-203ENST00000550436 CAP1Q01518 475 aa19.24■□□□□ 0.67
SVOP-203ENST00000550436 NBPF12Q5TAG4 269 aaPredicted RBP19.24■□□□□ 0.67
SVOP-203ENST00000550436 WNK4Q96J92 1243 aa19.24■□□□□ 0.67
SVOP-203ENST00000550436 PRMT6Q96LA8 375 aaPredicted RBP19.24■□□□□ 0.67
SVOP-203ENST00000550436 TRIM17Q9Y577 477 aa19.24■□□□□ 0.67
SVOP-203ENST00000550436 FLIIQ13045 1269 aa19.23■□□□□ 0.67
SVOP-203ENST00000550436 CFAP100Q494V2 611 aa19.23■□□□□ 0.67
SVOP-203ENST00000550436 OTOP1Q7RTM1 612 aa19.23■□□□□ 0.67
SVOP-203ENST00000550436 MANSC4A6NHS7 340 aaPredicted RBP19.22■□□□□ 0.67
SVOP-203ENST00000550436 MAP3K11Q16584 847 aa19.22■□□□□ 0.67
SVOP-203ENST00000550436 DNAAF4Q8WXU2 420 aa19.22■□□□□ 0.67
SVOP-203ENST00000550436 FOXO4P98177 505 aa19.21■□□□□ 0.67
SVOP-203ENST00000550436 WWC1Q8IX03 1113 aa19.21■□□□□ 0.67
SVOP-203ENST00000550436 ZNF594Q96JF6 807 aaPredicted RBP19.21■□□□□ 0.67
SVOP-203ENST00000550436 CHMP4AQ9BY43 222 aa19.21■□□□□ 0.67
SVOP-203ENST00000550436 VEZTQ9HBM0 779 aa19.21■□□□□ 0.67
SVOP-203ENST00000550436 ANKRD18BA2A2Z9 1011 aa19.2■□□□□ 0.66
SVOP-203ENST00000550436 USP2O75604 605 aaPredicted RBP19.2■□□□□ 0.66
SVOP-203ENST00000550436 MMP14P50281 582 aa19.2■□□□□ 0.66
SVOP-203ENST00000550436 FKBP5Q13451 457 aaPredicted RBP19.2■□□□□ 0.66
SVOP-203ENST00000550436 EPHA10Q5JZY3 1008 aa19.2■□□□□ 0.66
SVOP-203ENST00000550436 CDAN1Q8IWY9 1227 aa19.2■□□□□ 0.66
SVOP-203ENST00000550436 MTMR14Q8NCE2 650 aa19.2■□□□□ 0.66
SVOP-203ENST00000550436 CD99L2Q8TCZ2 262 aa19.2■□□□□ 0.66
SVOP-203ENST00000550436 PTPN18Q99952 460 aa19.2■□□□□ 0.66
SVOP-203ENST00000550436 HTTP42858 3142 aa19.2■□□□□ 0.66
SVOP-203ENST00000550436 LAMB1P07942 1786 aa19.19■□□□□ 0.66
SVOP-203ENST00000550436 SPDYE2BA6NHP3 402 aa19.19■□□□□ 0.66
SVOP-203ENST00000550436 F6X3S4 739 aa19.19■□□□□ 0.66
SVOP-203ENST00000550436 PLIN1O60240 522 aa19.19■□□□□ 0.66
SVOP-203ENST00000550436 ALDH1A1P00352 501 aa19.19■□□□□ 0.66
SVOP-203ENST00000550436 SPDYE6P0CI01 402 aa19.19■□□□□ 0.66
SVOP-203ENST00000550436 CRHR2Q13324 411 aa19.19■□□□□ 0.66
SVOP-203ENST00000550436 LINS1Q8NG48 757 aa19.19■□□□□ 0.66
SVOP-203ENST00000550436 CHMP3Q9Y3E7 222 aa19.19■□□□□ 0.66
SVOP-203ENST00000550436 COL1A1P02452 1464 aaPredicted RBP19.19■□□□□ 0.66
SVOP-203ENST00000550436 OTOFQ9HC10 1997 aa19.19■□□□□ 0.66
SVOP-203ENST00000550436 PPP1R12BO60237 982 aaPredicted RBP19.18■□□□□ 0.66
SVOP-203ENST00000550436 ZBTB48P10074 688 aaPredicted RBP19.18■□□□□ 0.66
SVOP-203ENST00000550436 IL1R1P14778 569 aa19.18■□□□□ 0.66
SVOP-203ENST00000550436 C15orf52Q6ZUT6 534 aaKnown RBP19.18■□□□□ 0.66
SVOP-203ENST00000550436 MYH16Q9H6N6 1097 aa19.18■□□□□ 0.66
SVOP-203ENST00000550436 RBM5P52756 815 aaKnown RBP eCLIP19.17■□□□□ 0.66
SVOP-203ENST00000550436 INHBEP58166 350 aa19.17■□□□□ 0.66
SVOP-203ENST00000550436 RASA3Q14644 834 aa19.17■□□□□ 0.66
SVOP-203ENST00000550436 FAM9BQ8IZU0 186 aa19.17■□□□□ 0.66
SVOP-203ENST00000550436 CNKSR2Q8WXI2 1034 aa19.17■□□□□ 0.66
SVOP-203ENST00000550436 CACNA1FO60840 1977 aa19.16■□□□□ 0.66
SVOP-203ENST00000550436 IFIT5Q13325 482 aaKnown RBP19.16■□□□□ 0.66
SVOP-203ENST00000550436 LMBR1LQ6UX01 489 aa19.16■□□□□ 0.66
SVOP-203ENST00000550436 ZNF804AQ7Z570 1209 aa19.16■□□□□ 0.66
SVOP-203ENST00000550436 ELP3Q9H9T3 547 aa19.16■□□□□ 0.66
SVOP-203ENST00000550436 PTPN22Q9Y2R2 807 aa19.16■□□□□ 0.66
SVOP-203ENST00000550436 PPP2R3BQ9Y5P8 575 aa19.16■□□□□ 0.66
SVOP-203ENST00000550436 VAMP4O75379 141 aa19.15■□□□□ 0.66
SVOP-203ENST00000550436 EN2P19622 333 aaPredicted RBP19.15■□□□□ 0.66
SVOP-203ENST00000550436 CCDC27Q2M243 656 aa19.15■□□□□ 0.66
SVOP-203ENST00000550436 SUPT20HL1Q3ZLR7 823 aa19.15■□□□□ 0.66
SVOP-203ENST00000550436 SALL2Q9Y467 1007 aaPredicted RBP19.15■□□□□ 0.66
SVOP-203ENST00000550436 FANCIQ9NVI1 1328 aa19.15■□□□□ 0.66
SVOP-203ENST00000550436 MYO1BO43795 1136 aa19.14■□□□□ 0.65
SVOP-203ENST00000550436 GRIK5Q16478 980 aa19.14■□□□□ 0.65
SVOP-203ENST00000550436 BEND3Q5T5X7 828 aa19.14■□□□□ 0.65
SVOP-203ENST00000550436 TDRD3Q9H7E2 651 aaKnown RBP19.14■□□□□ 0.65
SVOP-203ENST00000550436 ZNF70Q9UC06 446 aaPredicted RBP19.14■□□□□ 0.65
SVOP-203ENST00000550436 MKI67P46013 3256 aaKnown RBP19.13■□□□□ 0.65
SVOP-203ENST00000550436 GYG1P46976 350 aa19.13■□□□□ 0.65
SVOP-203ENST00000550436 IREB2P48200 963 aaKnown RBP19.13■□□□□ 0.65
SVOP-203ENST00000550436 FKBP1AP62942 108 aaKnown RBP19.13■□□□□ 0.65
SVOP-203ENST00000550436 EXOSC9Q06265 439 aaKnown RBP19.13■□□□□ 0.65
SVOP-203ENST00000550436 HABP4Q5JVS0 413 aaKnown RBP19.13■□□□□ 0.65
SVOP-203ENST00000550436 ERO1AQ96HE7 468 aa19.13■□□□□ 0.65
SVOP-203ENST00000550436 EFCC1Q9HA90 598 aa19.13■□□□□ 0.65
SVOP-203ENST00000550436 RBBP6Q7Z6E9 1792 aaKnown RBP19.13■□□□□ 0.65
SVOP-203ENST00000550436 CEP290O15078 2479 aa19.12■□□□□ 0.65
SVOP-203ENST00000550436 ZSWIM8A7E2V4 1837 aa19.12■□□□□ 0.65
SVOP-203ENST00000550436 TESPA1A2RU30 521 aaPredicted RBP19.12■□□□□ 0.65
SVOP-203ENST00000550436 SPDYE2Q495Y8 402 aa19.12■□□□□ 0.65
SVOP-203ENST00000550436 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.12■□□□□ 0.65
SVOP-203ENST00000550436 ANKRD13AQ8IZ07 590 aa19.12■□□□□ 0.65
SVOP-203ENST00000550436 OPTNQ96CV9 577 aa19.12■□□□□ 0.65
SVOP-203ENST00000550436 MS4A4AQ96JQ5 239 aa19.12■□□□□ 0.65
SVOP-203ENST00000550436 TEPSINQ96N21 525 aa19.12■□□□□ 0.65
SVOP-203ENST00000550436 PUS3Q9BZE2 481 aaKnown RBP19.12■□□□□ 0.65
SVOP-203ENST00000550436 CENPFP49454 3210 aa19.11■□□□□ 0.65
SVOP-203ENST00000550436 FAM205AQ6ZU69 1335 aa19.11■□□□□ 0.65
SVOP-203ENST00000550436 SP3Q02447 781 aa19.11■□□□□ 0.65
SVOP-203ENST00000550436 INTS3Q68E01 1043 aaKnown RBP19.11■□□□□ 0.65
SVOP-203ENST00000550436 LDHAL6AQ6ZMR3 332 aa19.11■□□□□ 0.65
SVOP-203ENST00000550436 TDRD7Q8NHU6 1098 aaKnown RBP19.11■□□□□ 0.65
SVOP-203ENST00000550436 BRI3BPQ8WY22 251 aa19.11■□□□□ 0.65
SVOP-203ENST00000550436 ARMC5Q96C12 935 aa19.11■□□□□ 0.65
SVOP-203ENST00000550436 CNNM1Q9NRU3 951 aa19.11■□□□□ 0.65
SVOP-203ENST00000550436 TTF2Q9UNY4 1162 aaKnown RBP19.11■□□□□ 0.65
SVOP-203ENST00000550436 IL16Q14005 1332 aa19.1■□□□□ 0.65
SVOP-203ENST00000550436 TCP10L2B9ZVM9 353 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms