RNA–Protein interactions for RNA: ENST00000550411.5

CBX5-204, Transcript of chromobox 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX5, Length 894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-204ENST00000550411 CHMP4AQ9BY43 222 aa8.77□□□□□ -1.01
CBX5-204ENST00000550411 SLC24A3Q9HC58 644 aa8.77□□□□□ -1.01
CBX5-204ENST00000550411 SAGE1Q9NXZ1 904 aa8.77□□□□□ -1.01
CBX5-204ENST00000550411 GGA3Q9NZ52 723 aa8.77□□□□□ -1.01
CBX5-204ENST00000550411 ANKIB1Q9P2G1 1089 aa8.77□□□□□ -1.01
CBX5-204ENST00000550411 MYH2Q9UKX2 1941 aa8.77□□□□□ -1.01
CBX5-204ENST00000550411 E9PSI1 815 aa8.76□□□□□ -1.01
CBX5-204ENST00000550411 H7C1W4 665 aa8.76□□□□□ -1.01
CBX5-204ENST00000550411 PDE8AO60658 829 aa8.76□□□□□ -1.01
CBX5-204ENST00000550411 SLC10A3P09131 477 aa8.76□□□□□ -1.01
CBX5-204ENST00000550411 GCKRQ14397 625 aa8.76□□□□□ -1.01
CBX5-204ENST00000550411 CCDC152Q4G0S7 254 aa8.76□□□□□ -1.01
CBX5-204ENST00000550411 BEND3Q5T5X7 828 aa8.76□□□□□ -1.01
CBX5-204ENST00000550411 UBE3BQ7Z3V4 1068 aa8.76□□□□□ -1.01
CBX5-204ENST00000550411 EFCAB3Q8N7B9 438 aa8.76□□□□□ -1.01
CBX5-204ENST00000550411 AGBL3Q8NEM8 1001 aa8.76□□□□□ -1.01
CBX5-204ENST00000550411 CDCA5Q96FF9 252 aa8.76□□□□□ -1.01
CBX5-204ENST00000550411 GGA1Q9UJY5 639 aa8.76□□□□□ -1.01
CBX5-204ENST00000550411 XDHP47989 1333 aa8.76□□□□□ -1.01
CBX5-204ENST00000550411 PTPRFP10586 1907 aa8.76□□□□□ -1.01
CBX5-204ENST00000550411 ZSWIM8A7E2V4 1837 aa8.75□□□□□ -1.01
CBX5-204ENST00000550411 TRPA1O75762 1119 aa8.75□□□□□ -1.01
CBX5-204ENST00000550411 ANGEL2Q5VTE6 544 aaKnown RBP8.75□□□□□ -1.01
CBX5-204ENST00000550411 DIEXFQ68CQ4 756 aaKnown RBP8.75□□□□□ -1.01
CBX5-204ENST00000550411 RSBN1LQ6PCB5 846 aaPredicted RBP8.75□□□□□ -1.01
CBX5-204ENST00000550411 MRPL50Q8N5N7 158 aaKnown RBP8.75□□□□□ -1.01
CBX5-204ENST00000550411 LINS1Q8NG48 757 aa8.75□□□□□ -1.01
CBX5-204ENST00000550411 TTLL11Q8NHH1 800 aa8.75□□□□□ -1.01
CBX5-204ENST00000550411 SSH1Q8WYL5 1049 aa8.75□□□□□ -1.01
CBX5-204ENST00000550411 CCDC85AQ96PX6 553 aaPredicted RBP8.75□□□□□ -1.01
CBX5-204ENST00000550411 PLA2G12BQ9BX93 195 aa8.75□□□□□ -1.01
CBX5-204ENST00000550411 GREM2Q9H772 168 aa8.75□□□□□ -1.01
CBX5-204ENST00000550411 RNF186Q9NXI6 227 aa8.75□□□□□ -1.01
CBX5-204ENST00000550411 ASTN2O75129 1339 aaPredicted RBP8.75□□□□□ -1.01
CBX5-204ENST00000550411 PITPNM2Q9BZ72 1349 aa8.75□□□□□ -1.01
CBX5-204ENST00000550411 ATP2B4P23634 1241 aa8.74□□□□□ -1.01
CBX5-204ENST00000550411 ZNF280AP59817 542 aaPredicted RBP8.74□□□□□ -1.01
CBX5-204ENST00000550411 NEXNQ0ZGT2 675 aa8.74□□□□□ -1.01
CBX5-204ENST00000550411 SCARF1Q14162 830 aa8.74□□□□□ -1.01
CBX5-204ENST00000550411 EPHA10Q5JZY3 1008 aa8.74□□□□□ -1.01
CBX5-204ENST00000550411 IFNL1Q8IU54 200 aa8.74□□□□□ -1.01
CBX5-204ENST00000550411 ANKRD18AQ8IVF6 992 aa8.74□□□□□ -1.01
CBX5-204ENST00000550411 CSRNP1Q96S65 589 aa8.74□□□□□ -1.01
CBX5-204ENST00000550411 MYOZ2Q9NPC6 264 aa8.74□□□□□ -1.01
CBX5-204ENST00000550411 ATAD5Q96QE3 1844 aa8.74□□□□□ -1.01
CBX5-204ENST00000550411 CDK5RAP2Q96SN8 1893 aa8.74□□□□□ -1.01
CBX5-204ENST00000550411 MED23Q9ULK4 1368 aa8.73□□□□□ -1.01
CBX5-204ENST00000550411 DOCK2Q92608 1830 aa8.73□□□□□ -1.01
CBX5-204ENST00000550411 WTIPA6NIX2 430 aaPredicted RBP8.73□□□□□ -1.01
CBX5-204ENST00000550411 USP17L8P0C7I0 530 aa8.73□□□□□ -1.01
CBX5-204ENST00000550411 FKBP1BP68106 108 aa8.73□□□□□ -1.01
CBX5-204ENST00000550411 PODNQ7Z5L7 613 aa8.73□□□□□ -1.01
CBX5-204ENST00000550411 RASAL3Q86YV0 1011 aa8.73□□□□□ -1.01
CBX5-204ENST00000550411 HOMEZQ8IX15 550 aa8.73□□□□□ -1.01
CBX5-204ENST00000550411 SP7Q8TDD2 431 aaPredicted RBP8.73□□□□□ -1.01
CBX5-204ENST00000550411 CDC5LQ99459 802 aaKnown RBP8.73□□□□□ -1.01
CBX5-204ENST00000550411 DAXXQ9UER7 740 aaPredicted RBP8.73□□□□□ -1.01
CBX5-204ENST00000550411 USP17L3A6NCW0 530 aa8.72□□□□□ -1.01
CBX5-204ENST00000550411 USP17L4A6NCW7 530 aa8.72□□□□□ -1.01
CBX5-204ENST00000550411 CSF1RP07333 972 aa8.72□□□□□ -1.01
CBX5-204ENST00000550411 FOXO4P98177 505 aa8.72□□□□□ -1.01
CBX5-204ENST00000550411 USP17L1Q7RTZ2 530 aa8.72□□□□□ -1.01
CBX5-204ENST00000550411 KAZALD1Q96I82 304 aa8.72□□□□□ -1.01
CBX5-204ENST00000550411 GMLQ99445 158 aa8.72□□□□□ -1.01
CBX5-204ENST00000550411 CEP290O15078 2479 aa8.72□□□□□ -1.01
CBX5-204ENST00000550411 MYO5AQ9Y4I1 1855 aaKnown RBP8.71□□□□□ -1.01
CBX5-204ENST00000550411 GRM8O00222 908 aa8.71□□□□□ -1.02
CBX5-204ENST00000550411 ZMYND10O75800 440 aa8.71□□□□□ -1.02
CBX5-204ENST00000550411 CCT4P50991 539 aaKnown RBP8.71□□□□□ -1.02
CBX5-204ENST00000550411 SOX10P56693 466 aa8.71□□□□□ -1.02
CBX5-204ENST00000550411 MFSD10Q14728 455 aa8.71□□□□□ -1.02
CBX5-204ENST00000550411 MOB2Q70IA6 237 aa8.71□□□□□ -1.02
CBX5-204ENST00000550411 CTU1Q7Z7A3 348 aaKnown RBP8.71□□□□□ -1.02
CBX5-204ENST00000550411 PIP4P2Q8N4L2 257 aa8.71□□□□□ -1.02
CBX5-204ENST00000550411 BSDC1Q9NW68 430 aaPredicted RBP8.71□□□□□ -1.02
CBX5-204ENST00000550411 SCAF8Q9UPN6 1271 aaKnown RBP8.71□□□□□ -1.02
CBX5-204ENST00000550411 UTYO14607 1347 aa8.71□□□□□ -1.02
CBX5-204ENST00000550411 MYO3BQ8WXR4 1341 aa8.71□□□□□ -1.02
CBX5-204ENST00000550411 IRS2Q9Y4H2 1338 aa8.71□□□□□ -1.02
CBX5-204ENST00000550411 UBE2Q2LH0YL09 131 aa8.7□□□□□ -1.02
CBX5-204ENST00000550411 ALDH1L1O75891 902 aa8.7□□□□□ -1.02
CBX5-204ENST00000550411 KLRK1P26718 216 aa8.7□□□□□ -1.02
CBX5-204ENST00000550411 NF2P35240 595 aa8.7□□□□□ -1.02
CBX5-204ENST00000550411 TTLL12Q14166 644 aaPredicted RBP8.7□□□□□ -1.02
CBX5-204ENST00000550411 NBPF9Q3BBW0 867 aa8.7□□□□□ -1.02
CBX5-204ENST00000550411 ALDH1L2Q3SY69 923 aa8.7□□□□□ -1.02
CBX5-204ENST00000550411 OGFOD1Q8N543 542 aa8.7□□□□□ -1.02
CBX5-204ENST00000550411 FBXW7Q969H0 707 aa8.7□□□□□ -1.02
CBX5-204ENST00000550411 SUCLG2Q96I99 432 aa8.7□□□□□ -1.02
CBX5-204ENST00000550411 MINPP1Q9UNW1 487 aa8.7□□□□□ -1.02
CBX5-204ENST00000550411 PTPRCP08575 1304 aa8.7□□□□□ -1.02
CBX5-204ENST00000550411 PHIPQ8WWQ0 1821 aa8.7□□□□□ -1.02
CBX5-204ENST00000550411 COL1A1P02452 1464 aaPredicted RBP8.7□□□□□ -1.02
CBX5-204ENST00000550411 WNT10BO00744 389 aa8.69□□□□□ -1.02
CBX5-204ENST00000550411 CT47B1P0C2W7 299 aaPredicted RBP8.69□□□□□ -1.02
CBX5-204ENST00000550411 NBPF7P0C2Y1 421 aaPredicted RBP8.69□□□□□ -1.02
CBX5-204ENST00000550411 ITGA6P23229 1130 aa8.69□□□□□ -1.02
CBX5-204ENST00000550411 IGHMBP2P38935 993 aaKnown RBP8.69□□□□□ -1.02
CBX5-204ENST00000550411 MMP14P50281 582 aa8.69□□□□□ -1.02
CBX5-204ENST00000550411 RARSP54136 660 aaKnown RBP8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 509.7 ms