RNA–Protein interactions for RNA: ENST00000550391.5

CACNB3-216, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-216ENST00000550391 MAP4K4O95819 1239 aaPredicted RBP17.16■□□□□ 0.34
CACNB3-216ENST00000550391 LBX1P52954 281 aa17.16■□□□□ 0.34
CACNB3-216ENST00000550391 SCARF1Q14162 830 aa17.16■□□□□ 0.34
CACNB3-216ENST00000550391 CNTROBQ8N137 903 aa17.16■□□□□ 0.34
CACNB3-216ENST00000550391 GPR101Q96P66 508 aaPredicted RBP17.16■□□□□ 0.34
CACNB3-216ENST00000550391 RTFDC1Q9BY42 306 aaPredicted RBP17.16■□□□□ 0.34
CACNB3-216ENST00000550391 GNL3LQ9NVN8 582 aaKnown RBP17.16■□□□□ 0.34
CACNB3-216ENST00000550391 AK9Q5TCS8 1911 aa17.15■□□□□ 0.34
CACNB3-216ENST00000550391 CCDC85CA6NKD9 419 aa17.15■□□□□ 0.34
CACNB3-216ENST00000550391 C6orf229H3BNL8 230 aa17.15■□□□□ 0.34
CACNB3-216ENST00000550391 HIBADHP31937 336 aaKnown RBP17.15■□□□□ 0.34
CACNB3-216ENST00000550391 MCAMP43121 646 aa17.15■□□□□ 0.34
CACNB3-216ENST00000550391 CCDC93Q567U6 631 aa17.15■□□□□ 0.34
CACNB3-216ENST00000550391 VPS37DQ86XT2 251 aa17.15■□□□□ 0.34
CACNB3-216ENST00000550391 RILPL2Q969X0 211 aa17.15■□□□□ 0.34
CACNB3-216ENST00000550391 EVI5LQ96CN4 794 aa17.15■□□□□ 0.34
CACNB3-216ENST00000550391 CNTNAP1P78357 1384 aa17.15■□□□□ 0.34
CACNB3-216ENST00000550391 SOGA3Q5TF21 947 aa17.14■□□□□ 0.33
CACNB3-216ENST00000550391 RTKN2Q8IZC4 609 aa17.14■□□□□ 0.33
CACNB3-216ENST00000550391 DNAJC2Q99543 621 aaKnown RBP17.14■□□□□ 0.33
CACNB3-216ENST00000550391 NDUFB9Q9Y6M9 179 aa17.14■□□□□ 0.33
CACNB3-216ENST00000550391 SBF1O95248 1867 aa17.14■□□□□ 0.33
CACNB3-216ENST00000550391 RASGRF1Q13972 1273 aa17.13■□□□□ 0.33
CACNB3-216ENST00000550391 C8orf34Q49A92 452 aa17.13■□□□□ 0.33
CACNB3-216ENST00000550391 ZNF804AQ7Z570 1209 aa17.13■□□□□ 0.33
CACNB3-216ENST00000550391 EDC3Q96F86 508 aaKnown RBP17.13■□□□□ 0.33
CACNB3-216ENST00000550391 EYA3Q99504 573 aa17.13■□□□□ 0.33
CACNB3-216ENST00000550391 PAG1Q9NWQ8 432 aa17.13■□□□□ 0.33
CACNB3-216ENST00000550391 WBP1LQ9NX94 342 aa17.13■□□□□ 0.33
CACNB3-216ENST00000550391 HMG20BQ9P0W2 317 aa17.13■□□□□ 0.33
CACNB3-216ENST00000550391 MYH13Q9UKX3 1938 aa17.13■□□□□ 0.33
CACNB3-216ENST00000550391 SEMA3EO15041 775 aa17.12■□□□□ 0.33
CACNB3-216ENST00000550391 CDC45O75419 566 aa17.12■□□□□ 0.33
CACNB3-216ENST00000550391 ZAP70P43403 619 aa17.12■□□□□ 0.33
CACNB3-216ENST00000550391 FKBP4Q02790 459 aaKnown RBP eCLIP17.12■□□□□ 0.33
CACNB3-216ENST00000550391 WASHC4Q2M389 1173 aa17.12■□□□□ 0.33
CACNB3-216ENST00000550391 PI16Q6UXB8 463 aa17.12■□□□□ 0.33
CACNB3-216ENST00000550391 SPATA5Q8NB90 893 aa17.12■□□□□ 0.33
CACNB3-216ENST00000550391 SUPT20HQ8NEM7 779 aa17.12■□□□□ 0.33
CACNB3-216ENST00000550391 PSMD1Q99460 953 aa17.12■□□□□ 0.33
CACNB3-216ENST00000550391 SNRKQ9NRH2 765 aa17.12■□□□□ 0.33
CACNB3-216ENST00000550391 FER1L6Q2WGJ9 1857 aa17.12■□□□□ 0.33
CACNB3-216ENST00000550391 COL1A1P02452 1464 aaPredicted RBP17.12■□□□□ 0.33
CACNB3-216ENST00000550391 GOLIM4O00461 696 aa17.11■□□□□ 0.33
CACNB3-216ENST00000550391 CASC1Q6TDU7 716 aa17.11■□□□□ 0.33
CACNB3-216ENST00000550391 TDRD7Q8NHU6 1098 aaKnown RBP17.11■□□□□ 0.33
CACNB3-216ENST00000550391 ZC3H12CQ9C0D7 883 aaKnown RBP17.11■□□□□ 0.33
CACNB3-216ENST00000550391 ANTXR1Q9H6X2 564 aa17.11■□□□□ 0.33
CACNB3-216ENST00000550391 CD209Q9NNX6 404 aa17.11■□□□□ 0.33
CACNB3-216ENST00000550391 DENND2AQ9ULE3 1009 aa17.11■□□□□ 0.33
CACNB3-216ENST00000550391 PDS5AQ29RF7 1337 aaKnown RBP17.11■□□□□ 0.33
CACNB3-216ENST00000550391 RIMBP2O15034 1052 aa17.1■□□□□ 0.33
CACNB3-216ENST00000550391 CYP2E1P05181 493 aaPredicted RBP17.1■□□□□ 0.33
CACNB3-216ENST00000550391 IL1R1P14778 569 aa17.1■□□□□ 0.33
CACNB3-216ENST00000550391 TICAM2Q86XR7 235 aa17.1■□□□□ 0.33
CACNB3-216ENST00000550391 KBTBD3Q8NAB2 608 aa17.1■□□□□ 0.33
CACNB3-216ENST00000550391 COA1Q9GZY4 146 aa17.1■□□□□ 0.33
CACNB3-216ENST00000550391 IQSEC3Q9UPP2 1182 aaPredicted RBP17.1■□□□□ 0.33
CACNB3-216ENST00000550391 DOCK2Q92608 1830 aa17.1■□□□□ 0.33
CACNB3-216ENST00000550391 LMNB1P20700 586 aa17.09■□□□□ 0.33
CACNB3-216ENST00000550391 TTF1Q15361 905 aaPredicted RBP17.09■□□□□ 0.33
CACNB3-216ENST00000550391 TBC1D9Q6ZT07 1266 aa17.09■□□□□ 0.33
CACNB3-216ENST00000550391 FSD1Q9BTV5 496 aa17.09■□□□□ 0.33
CACNB3-216ENST00000550391 BACH2Q9BYV9 841 aa17.09■□□□□ 0.33
CACNB3-216ENST00000550391 RFX7Q2KHR2 1363 aa17.09■□□□□ 0.33
CACNB3-216ENST00000550391 HIP1O00291 1037 aa17.08■□□□□ 0.32
CACNB3-216ENST00000550391 FRAT2O75474 233 aaPredicted RBP17.08■□□□□ 0.32
CACNB3-216ENST00000550391 HSPA8P11142 646 aaKnown RBP17.08■□□□□ 0.32
CACNB3-216ENST00000550391 CHMLP26374 656 aa17.08■□□□□ 0.32
CACNB3-216ENST00000550391 KIAA2012Q0VF49 1180 aa17.08■□□□□ 0.32
CACNB3-216ENST00000550391 CHADLQ6NUI6 762 aa17.08■□□□□ 0.32
CACNB3-216ENST00000550391 DPY19L2Q6NUT2 758 aa17.08■□□□□ 0.32
CACNB3-216ENST00000550391 VPS33BQ9H267 617 aa17.08■□□□□ 0.32
CACNB3-216ENST00000550391 MYO5AQ9Y4I1 1855 aaKnown RBP17.07■□□□□ 0.32
CACNB3-216ENST00000550391 AOC3Q16853 763 aa17.07■□□□□ 0.32
CACNB3-216ENST00000550391 LRRFIP1Q32MZ4 808 aaKnown RBP17.07■□□□□ 0.32
CACNB3-216ENST00000550391 PIH1D3Q9NQM4 214 aaKnown RBP17.07■□□□□ 0.32
CACNB3-216ENST00000550391 MYH7P12883 1935 aa17.06■□□□□ 0.32
CACNB3-216ENST00000550391 G3V3G9 751 aa17.06■□□□□ 0.32
CACNB3-216ENST00000550391 EIF5BO60841 1220 aaKnown RBP17.06■□□□□ 0.32
CACNB3-216ENST00000550391 VEGFBP49765 207 aa17.06■□□□□ 0.32
CACNB3-216ENST00000550391 MAP2K1Q02750 393 aaPredicted RBP17.06■□□□□ 0.32
CACNB3-216ENST00000550391 DOK7Q18PE1 504 aa17.06■□□□□ 0.32
CACNB3-216ENST00000550391 DCAF8Q5TAQ9 597 aa17.06■□□□□ 0.32
CACNB3-216ENST00000550391 LTBP3Q9NS15 1303 aa17.05■□□□□ 0.32
CACNB3-216ENST00000550391 SALL1Q9NSC2 1324 aa17.05■□□□□ 0.32
CACNB3-216ENST00000550391 NFKBIEO00221 500 aa17.05■□□□□ 0.32
CACNB3-216ENST00000550391 PPIP5K2O43314 1243 aa17.05■□□□□ 0.32
CACNB3-216ENST00000550391 PODNQ7Z5L7 613 aa17.05■□□□□ 0.32
CACNB3-216ENST00000550391 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.05■□□□□ 0.32
CACNB3-216ENST00000550391 TAOK3Q9H2K8 898 aa17.05■□□□□ 0.32
CACNB3-216ENST00000550391 DIAPH3Q9NSV4 1193 aa17.05■□□□□ 0.32
CACNB3-216ENST00000550391 FAM205AQ6ZU69 1335 aa17.04■□□□□ 0.32
CACNB3-216ENST00000550391 POTECB2RU33 542 aa17.04■□□□□ 0.32
CACNB3-216ENST00000550391 CHAF1AQ13111 956 aaPredicted RBP17.04■□□□□ 0.32
CACNB3-216ENST00000550391 ZSCAN25Q6NSZ9 544 aa17.04■□□□□ 0.32
CACNB3-216ENST00000550391 WDR66Q8TBY9 1149 aa17.04■□□□□ 0.32
CACNB3-216ENST00000550391 RUFY2Q8WXA3 655 aa17.04■□□□□ 0.32
CACNB3-216ENST00000550391 DBNDD1Q9H9R9 158 aa17.04■□□□□ 0.32
CACNB3-216ENST00000550391 ZNF277Q9NRM2 450 aaPredicted RBP17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms