RNA–Protein interactions for RNA: ENST00000550280.1

SMARCD1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 2

Gene SMARCD1, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-208ENST00000550280 ZNF594Q96JF6 807 aaPredicted RBP14.78□□□□□ -0.04
SMARCD1-208ENST00000550280 DEFB129Q9H1M3 183 aa14.78□□□□□ -0.04
SMARCD1-208ENST00000550280 ANGEL1Q9UNK9 670 aaKnown RBP14.78□□□□□ -0.04
SMARCD1-208ENST00000550280 JAG2Q9Y219 1238 aa14.78□□□□□ -0.04
SMARCD1-208ENST00000550280 COL1A1P02452 1464 aaPredicted RBP14.77□□□□□ -0.04
SMARCD1-208ENST00000550280 CLRN2A0PK11 232 aa14.77□□□□□ -0.05
SMARCD1-208ENST00000550280 NF2P35240 595 aa14.77□□□□□ -0.05
SMARCD1-208ENST00000550280 GJA5P36382 358 aa14.77□□□□□ -0.05
SMARCD1-208ENST00000550280 ARMC9Q7Z3E5 817 aa14.77□□□□□ -0.05
SMARCD1-208ENST00000550280 PRMT6Q96LA8 375 aaPredicted RBP14.77□□□□□ -0.05
SMARCD1-208ENST00000550280 HDAC9Q9UKV0 1011 aa14.77□□□□□ -0.05
SMARCD1-208ENST00000550280 SALL2Q9Y467 1007 aaPredicted RBP14.77□□□□□ -0.05
SMARCD1-208ENST00000550280 PDE4DIPQ5VU43 2346 aa14.77□□□□□ -0.05
SMARCD1-208ENST00000550280 SPDYE2BA6NHP3 402 aa14.76□□□□□ -0.05
SMARCD1-208ENST00000550280 F8W031 263 aaPredicted RBP14.76□□□□□ -0.05
SMARCD1-208ENST00000550280 IGF2BP3O00425 579 aaKnown RBP eCLIP14.76□□□□□ -0.05
SMARCD1-208ENST00000550280 SPDYE6P0CI01 402 aa14.76□□□□□ -0.05
SMARCD1-208ENST00000550280 KCNJ4P48050 445 aa14.76□□□□□ -0.05
SMARCD1-208ENST00000550280 CAP1Q01518 475 aa14.76□□□□□ -0.05
SMARCD1-208ENST00000550280 DLGAP5Q15398 846 aa14.76□□□□□ -0.05
SMARCD1-208ENST00000550280 CFAP100Q494V2 611 aa14.76□□□□□ -0.05
SMARCD1-208ENST00000550280 LMBR1LQ6UX01 489 aa14.76□□□□□ -0.05
SMARCD1-208ENST00000550280 KAZALD1Q96I82 304 aa14.76□□□□□ -0.05
SMARCD1-208ENST00000550280 MKI67P46013 3256 aaKnown RBP14.76□□□□□ -0.05
SMARCD1-208ENST00000550280 SREBF2Q12772 1141 aa14.75□□□□□ -0.05
SMARCD1-208ENST00000550280 IFIT5Q13325 482 aaKnown RBP14.75□□□□□ -0.05
SMARCD1-208ENST00000550280 PKN2Q16513 984 aaKnown RBP14.75□□□□□ -0.05
SMARCD1-208ENST00000550280 NBPF12Q5TAG4 269 aaPredicted RBP14.75□□□□□ -0.05
SMARCD1-208ENST00000550280 CDAN1Q8IWY9 1227 aa14.75□□□□□ -0.05
SMARCD1-208ENST00000550280 WNK4Q96J92 1243 aa14.75□□□□□ -0.05
SMARCD1-208ENST00000550280 FKTNO75072 461 aa14.74□□□□□ -0.05
SMARCD1-208ENST00000550280 FKBP1AP62942 108 aaKnown RBP14.74□□□□□ -0.05
SMARCD1-208ENST00000550280 FBXO46Q6PJ61 603 aaPredicted RBP14.74□□□□□ -0.05
SMARCD1-208ENST00000550280 IFNL1Q8IU54 200 aa14.74□□□□□ -0.05
SMARCD1-208ENST00000550280 WDR63Q8IWG1 891 aa14.74□□□□□ -0.05
SMARCD1-208ENST00000550280 LAMB1P07942 1786 aa14.74□□□□□ -0.05
SMARCD1-208ENST00000550280 BRCA2P51587 3418 aa14.73□□□□□ -0.05
SMARCD1-208ENST00000550280 GRM8O00222 908 aa14.73□□□□□ -0.05
SMARCD1-208ENST00000550280 USP2O75604 605 aaPredicted RBP14.73□□□□□ -0.05
SMARCD1-208ENST00000550280 GRIK5Q16478 980 aa14.73□□□□□ -0.05
SMARCD1-208ENST00000550280 PUS3Q9BZE2 481 aaKnown RBP14.73□□□□□ -0.05
SMARCD1-208ENST00000550280 MRS2Q9HD23 443 aa14.73□□□□□ -0.05
SMARCD1-208ENST00000550280 CHMP3Q9Y3E7 222 aa14.73□□□□□ -0.05
SMARCD1-208ENST00000550280 ECM29Q5VYK3 1845 aa14.73□□□□□ -0.05
SMARCD1-208ENST00000550280 CENPFP49454 3210 aa14.72□□□□□ -0.05
SMARCD1-208ENST00000550280 FAM205AQ6ZU69 1335 aa14.72□□□□□ -0.05
SMARCD1-208ENST00000550280 PLIN1O60240 522 aa14.72□□□□□ -0.05
SMARCD1-208ENST00000550280 LDHAL6AQ6ZMR3 332 aa14.72□□□□□ -0.05
SMARCD1-208ENST00000550280 ZNF804AQ7Z570 1209 aa14.72□□□□□ -0.05
SMARCD1-208ENST00000550280 TDRD7Q8NHU6 1098 aaKnown RBP14.72□□□□□ -0.05
SMARCD1-208ENST00000550280 SLC10A4Q96EP9 437 aa14.72□□□□□ -0.05
SMARCD1-208ENST00000550280 SUCLG2Q96I99 432 aa14.72□□□□□ -0.05
SMARCD1-208ENST00000550280 PTPN18Q99952 460 aa14.72□□□□□ -0.05
SMARCD1-208ENST00000550280 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.72□□□□□ -0.05
SMARCD1-208ENST00000550280 PPP2R3BQ9Y5P8 575 aa14.72□□□□□ -0.05
SMARCD1-208ENST00000550280 MANSC4A6NHS7 340 aaPredicted RBP14.71□□□□□ -0.05
SMARCD1-208ENST00000550280 ZBTB48P10074 688 aaPredicted RBP14.71□□□□□ -0.05
SMARCD1-208ENST00000550280 GYG1P46976 350 aa14.71□□□□□ -0.05
SMARCD1-208ENST00000550280 RASA3Q14644 834 aa14.71□□□□□ -0.05
SMARCD1-208ENST00000550280 PRPF38BQ5VTL8 546 aaKnown RBP14.71□□□□□ -0.05
SMARCD1-208ENST00000550280 FAM84BQ96KN1 310 aaPredicted RBP14.71□□□□□ -0.05
SMARCD1-208ENST00000550280 TEPSINQ96N21 525 aa14.71□□□□□ -0.05
SMARCD1-208ENST00000550280 VEZTQ9HBM0 779 aa14.71□□□□□ -0.05
SMARCD1-208ENST00000550280 SPDYE2Q495Y8 402 aa14.7□□□□□ -0.06
SMARCD1-208ENST00000550280 OTOP1Q7RTM1 612 aa14.7□□□□□ -0.06
SMARCD1-208ENST00000550280 ZNF70Q9UC06 446 aaPredicted RBP14.7□□□□□ -0.06
SMARCD1-208ENST00000550280 CACNA1FO60840 1977 aa14.7□□□□□ -0.06
SMARCD1-208ENST00000550280 OTOFQ9HC10 1997 aa14.7□□□□□ -0.06
SMARCD1-208ENST00000550280 TESPA1A2RU30 521 aaPredicted RBP14.69□□□□□ -0.06
SMARCD1-208ENST00000550280 PPP1R12BO60237 982 aaPredicted RBP14.69□□□□□ -0.06
SMARCD1-208ENST00000550280 ALDH1A1P00352 501 aa14.69□□□□□ -0.06
SMARCD1-208ENST00000550280 NBPF7P0C2Y1 421 aaPredicted RBP14.69□□□□□ -0.06
SMARCD1-208ENST00000550280 CRHR2Q13324 411 aa14.69□□□□□ -0.06
SMARCD1-208ENST00000550280 CCDC57Q2TAC2 916 aa14.69□□□□□ -0.06
SMARCD1-208ENST00000550280 MFSD14BQ5SR56 506 aa14.69□□□□□ -0.06
SMARCD1-208ENST00000550280 CNKSR2Q8WXI2 1034 aa14.69□□□□□ -0.06
SMARCD1-208ENST00000550280 MS4A4AQ96JQ5 239 aa14.69□□□□□ -0.06
SMARCD1-208ENST00000550280 TDRD3Q9H7E2 651 aaKnown RBP14.69□□□□□ -0.06
SMARCD1-208ENST00000550280 CNNM1Q9NRU3 951 aa14.69□□□□□ -0.06
SMARCD1-208ENST00000550280 RIPOR2Q9Y4F9 1068 aa14.69□□□□□ -0.06
SMARCD1-208ENST00000550280 POTEFA5A3E0 1075 aa14.68□□□□□ -0.06
SMARCD1-208ENST00000550280 ALDH1L1O75891 902 aa14.68□□□□□ -0.06
SMARCD1-208ENST00000550280 INHBEP58166 350 aa14.68□□□□□ -0.06
SMARCD1-208ENST00000550280 UBE4AQ14139 1066 aa14.68□□□□□ -0.06
SMARCD1-208ENST00000550280 SUPT20HL1Q3ZLR7 823 aa14.68□□□□□ -0.06
SMARCD1-208ENST00000550280 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.68□□□□□ -0.06
SMARCD1-208ENST00000550280 TRIM17Q9Y577 477 aa14.68□□□□□ -0.06
SMARCD1-208ENST00000550280 UTYO14607 1347 aa14.67□□□□□ -0.06
SMARCD1-208ENST00000550280 ARAP2Q8WZ64 1704 aa14.67□□□□□ -0.06
SMARCD1-208ENST00000550280 UNCXA6NJT0 531 aa14.67□□□□□ -0.06
SMARCD1-208ENST00000550280 MYO1BO43795 1136 aa14.67□□□□□ -0.06
SMARCD1-208ENST00000550280 RBM5P52756 815 aaKnown RBP eCLIP14.67□□□□□ -0.06
SMARCD1-208ENST00000550280 DZIP1LQ8IYY4 767 aaKnown RBP14.67□□□□□ -0.06
SMARCD1-208ENST00000550280 ANKRD44Q8N8A2 993 aa14.67□□□□□ -0.06
SMARCD1-208ENST00000550280 CD99L2Q8TCZ2 262 aa14.67□□□□□ -0.06
SMARCD1-208ENST00000550280 SRCIN1Q9C0H9 1055 aa14.67□□□□□ -0.06
SMARCD1-208ENST00000550280 ELP3Q9H9T3 547 aa14.67□□□□□ -0.06
SMARCD1-208ENST00000550280 SERPINA10Q9UK55 444 aa14.67□□□□□ -0.06
SMARCD1-208ENST00000550280 TTF2Q9UNY4 1162 aaKnown RBP14.67□□□□□ -0.06
SMARCD1-208ENST00000550280 ZNF521Q96K83 1311 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms