RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 FGFR2P21802 821 aa21.44■■□□□ 1.02
CHMP1A-208ENST00000550102 SCARF1Q14162 830 aa21.44■■□□□ 1.02
CHMP1A-208ENST00000550102 USP48Q86UV5 1035 aa21.44■■□□□ 1.02
CHMP1A-208ENST00000550102 SULF1Q8IWU6 871 aa21.44■■□□□ 1.02
CHMP1A-208ENST00000550102 CERS5Q8N5B7 392 aa21.44■■□□□ 1.02
CHMP1A-208ENST00000550102 PA2G4Q9UQ80 394 aaKnown RBP21.44■■□□□ 1.02
CHMP1A-208ENST00000550102 ASTN2O75129 1339 aaPredicted RBP21.44■■□□□ 1.02
CHMP1A-208ENST00000550102 PITPNM2Q9BZ72 1349 aa21.44■■□□□ 1.02
CHMP1A-208ENST00000550102 SASH1O94885 1247 aa21.43■■□□□ 1.02
CHMP1A-208ENST00000550102 CELF2O95319 508 aaKnown RBP21.43■■□□□ 1.02
CHMP1A-208ENST00000550102 IL15P40933 162 aaPredicted RBP21.43■■□□□ 1.02
CHMP1A-208ENST00000550102 ANGEL2Q5VTE6 544 aaKnown RBP21.43■■□□□ 1.02
CHMP1A-208ENST00000550102 FBXO33Q7Z6M2 555 aa21.43■■□□□ 1.02
CHMP1A-208ENST00000550102 CEP126Q9P2H0 1117 aa21.43■■□□□ 1.02
CHMP1A-208ENST00000550102 JAG2Q9Y219 1238 aa21.43■■□□□ 1.02
CHMP1A-208ENST00000550102 RASSF10A6NK89 507 aa21.42■■□□□ 1.02
CHMP1A-208ENST00000550102 ADM5C9JUS6 153 aa21.42■■□□□ 1.02
CHMP1A-208ENST00000550102 CST9Q5W186 159 aa21.42■■□□□ 1.02
CHMP1A-208ENST00000550102 LPIN2Q92539 896 aa21.42■■□□□ 1.02
CHMP1A-208ENST00000550102 ZNF408Q9H9D4 720 aa21.42■■□□□ 1.02
CHMP1A-208ENST00000550102 RCAN3Q9UKA8 241 aa21.42■■□□□ 1.02
CHMP1A-208ENST00000550102 PCNTO95613 3336 aa21.41■■□□□ 1.02
CHMP1A-208ENST00000550102 MS4A1P11836 297 aa21.41■■□□□ 1.02
CHMP1A-208ENST00000550102 ATP2B3Q16720 1220 aa21.41■■□□□ 1.02
CHMP1A-208ENST00000550102 MFSD14BQ5SR56 506 aa21.41■■□□□ 1.02
CHMP1A-208ENST00000550102 WNT10BO00744 389 aa21.4■■□□□ 1.02
CHMP1A-208ENST00000550102 FRAT2O75474 233 aaPredicted RBP21.4■■□□□ 1.02
CHMP1A-208ENST00000550102 NBPF9Q3BBW0 867 aa21.4■■□□□ 1.02
CHMP1A-208ENST00000550102 IQSEC3Q9UPP2 1182 aaPredicted RBP21.4■■□□□ 1.02
CHMP1A-208ENST00000550102 PAPPA2Q9BXP8 1791 aa21.4■■□□□ 1.02
CHMP1A-208ENST00000550102 F8W031 263 aaPredicted RBP21.39■■□□□ 1.01
CHMP1A-208ENST00000550102 BCAMP50895 628 aa21.39■■□□□ 1.01
CHMP1A-208ENST00000550102 TLL2Q9Y6L7 1015 aa21.39■■□□□ 1.01
CHMP1A-208ENST00000550102 PNMA6EA0A0J9YXQ4 647 aa21.38■■□□□ 1.01
CHMP1A-208ENST00000550102 CHAF1AQ13111 956 aaPredicted RBP21.38■■□□□ 1.01
CHMP1A-208ENST00000550102 DLGAP5Q15398 846 aa21.38■■□□□ 1.01
CHMP1A-208ENST00000550102 DEFB115Q30KQ5 88 aa21.38■■□□□ 1.01
CHMP1A-208ENST00000550102 PANK1Q8TE04 598 aa21.38■■□□□ 1.01
CHMP1A-208ENST00000550102 TBC1D22AQ8WUA7 517 aa21.38■■□□□ 1.01
CHMP1A-208ENST00000550102 COL1A1P02452 1464 aaPredicted RBP21.38■■□□□ 1.01
CHMP1A-208ENST00000550102 VEGFBP49765 207 aa21.37■■□□□ 1.01
CHMP1A-208ENST00000550102 MTMR14Q8NCE2 650 aa21.37■■□□□ 1.01
CHMP1A-208ENST00000550102 CDCA5Q96FF9 252 aa21.37■■□□□ 1.01
CHMP1A-208ENST00000550102 ZBED3Q96IU2 234 aaPredicted RBP21.37■■□□□ 1.01
CHMP1A-208ENST00000550102 ZBTB7BO15156 539 aaPredicted RBP21.36■■□□□ 1.01
CHMP1A-208ENST00000550102 DLK2Q6UY11 383 aa21.36■■□□□ 1.01
CHMP1A-208ENST00000550102 PAXIP1Q6ZW49 1069 aaPredicted RBP21.36■■□□□ 1.01
CHMP1A-208ENST00000550102 SAPCD2Q86UD0 394 aa21.36■■□□□ 1.01
CHMP1A-208ENST00000550102 APOBEC3FQ8IUX4 373 aaKnown RBP21.36■■□□□ 1.01
CHMP1A-208ENST00000550102 C1orf115Q9H7X2 142 aa21.36■■□□□ 1.01
CHMP1A-208ENST00000550102 CFAP100Q494V2 611 aa21.35■■□□□ 1.01
CHMP1A-208ENST00000550102 TTF2Q9UNY4 1162 aaKnown RBP21.35■■□□□ 1.01
CHMP1A-208ENST00000550102 SPDYE2BA6NHP3 402 aa21.34■■□□□ 1.01
CHMP1A-208ENST00000550102 SPDYE6P0CI01 402 aa21.34■■□□□ 1.01
CHMP1A-208ENST00000550102 ECE1P42892 770 aa21.34■■□□□ 1.01
CHMP1A-208ENST00000550102 POLA2Q14181 598 aa21.34■■□□□ 1.01
CHMP1A-208ENST00000550102 HHIPL1Q96JK4 782 aa21.34■■□□□ 1.01
CHMP1A-208ENST00000550102 CAPNS2Q96L46 248 aa21.34■■□□□ 1.01
CHMP1A-208ENST00000550102 GBA2Q9HCG7 927 aaPredicted RBP21.34■■□□□ 1.01
CHMP1A-208ENST00000550102 GNL3LQ9NVN8 582 aaKnown RBP21.34■■□□□ 1.01
CHMP1A-208ENST00000550102 AKAP2Q9Y2D5 859 aa21.34■■□□□ 1.01
CHMP1A-208ENST00000550102 WDR33Q9C0J8 1336 aaKnown RBP21.33■■□□□ 1.01
CHMP1A-208ENST00000550102 MYO1BO43795 1136 aa21.33■■□□□ 1.01
CHMP1A-208ENST00000550102 RBM5P52756 815 aaKnown RBP eCLIP21.33■■□□□ 1.01
CHMP1A-208ENST00000550102 TFCP2Q12800 502 aa21.33■■□□□ 1.01
CHMP1A-208ENST00000550102 C2orf69Q8N8R5 385 aa21.33■■□□□ 1.01
CHMP1A-208ENST00000550102 SSH3Q8TE77 659 aa21.33■■□□□ 1.01
CHMP1A-208ENST00000550102 SERPINA10Q9UK55 444 aa21.33■■□□□ 1.01
CHMP1A-208ENST00000550102 MAST3O60307 1309 aa21.32■■□□□ 1
CHMP1A-208ENST00000550102 ATP8B2P98198 1209 aa21.32■■□□□ 1
CHMP1A-208ENST00000550102 G3BP1Q13283 466 aaKnown RBP eCLIP21.32■■□□□ 1
CHMP1A-208ENST00000550102 MVPQ14764 893 aaKnown RBP21.32■■□□□ 1
CHMP1A-208ENST00000550102 SCAF8Q9UPN6 1271 aaKnown RBP21.32■■□□□ 1
CHMP1A-208ENST00000550102 A0A1B0GUL7 405 aa21.31■■□□□ 1
CHMP1A-208ENST00000550102 SEMA3EO15041 775 aa21.31■■□□□ 1
CHMP1A-208ENST00000550102 ADORA1P30542 326 aa21.31■■□□□ 1
CHMP1A-208ENST00000550102 PHKA1P46020 1223 aa21.31■■□□□ 1
CHMP1A-208ENST00000550102 HUNKP57058 714 aa21.31■■□□□ 1
CHMP1A-208ENST00000550102 CYP4F22Q6NT55 531 aa21.31■■□□□ 1
CHMP1A-208ENST00000550102 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.31■■□□□ 1
CHMP1A-208ENST00000550102 WDR66Q8TBY9 1149 aa21.31■■□□□ 1
CHMP1A-208ENST00000550102 SUGT1Q9Y2Z0 365 aa21.31■■□□□ 1
CHMP1A-208ENST00000550102 PCDHAC2Q9Y5I4 1007 aa21.31■■□□□ 1
CHMP1A-208ENST00000550102 MYH2Q9UKX2 1941 aa21.3■■□□□ 1
CHMP1A-208ENST00000550102 HSPA1AP0DMV8 641 aaKnown RBP21.3■■□□□ 1
CHMP1A-208ENST00000550102 HSPA1BP0DMV9 641 aaKnown RBP21.3■■□□□ 1
CHMP1A-208ENST00000550102 GRM1Q13255 1194 aa21.3■■□□□ 1
CHMP1A-208ENST00000550102 OS9Q13438 667 aaPredicted RBP21.3■■□□□ 1
CHMP1A-208ENST00000550102 DDX19BQ9UMR2 479 aa21.3■■□□□ 1
CHMP1A-208ENST00000550102 NF2P35240 595 aa21.29■■□□□ 1
CHMP1A-208ENST00000550102 CRKP46108 304 aa21.29■■□□□ 1
CHMP1A-208ENST00000550102 FKBP1BP68106 108 aa21.29■■□□□ 1
CHMP1A-208ENST00000550102 HDLBPQ00341 1268 aaKnown RBP21.29■■□□□ 1
CHMP1A-208ENST00000550102 GRIK5Q16478 980 aa21.29■■□□□ 1
CHMP1A-208ENST00000550102 CCDC102BQ68D86 513 aa21.29■■□□□ 1
CHMP1A-208ENST00000550102 CEP85Q6P2H3 762 aa21.29■■□□□ 1
CHMP1A-208ENST00000550102 PRMT6Q96LA8 375 aaPredicted RBP21.29■■□□□ 1
CHMP1A-208ENST00000550102 COG6Q9Y2V7 657 aa21.29■■□□□ 1
CHMP1A-208ENST00000550102 CLRN2A0PK11 232 aa21.28■■□□□ 1
CHMP1A-208ENST00000550102 ZBTB22O15209 634 aa21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms