RNA–Protein interactions for RNA: ENST00000550020.6

TMEM116-209, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-209ENST00000550020 TTC6Q86TZ1 520 aa10.49□□□□□ -0.73
TMEM116-209ENST00000550020 FERMT3Q86UX7 667 aa10.49□□□□□ -0.73
TMEM116-209ENST00000550020 NSUN7Q8NE18 718 aaKnown RBP10.49□□□□□ -0.73
TMEM116-209ENST00000550020 BICD2Q8TD16 824 aa10.49□□□□□ -0.73
TMEM116-209ENST00000550020 LEO1Q8WVC0 666 aaPredicted RBP10.49□□□□□ -0.73
TMEM116-209ENST00000550020 AIDAQ96BJ3 306 aa10.49□□□□□ -0.73
TMEM116-209ENST00000550020 TMEM87BQ96K49 555 aa10.49□□□□□ -0.73
TMEM116-209ENST00000550020 CCDC85AQ96PX6 553 aaPredicted RBP10.49□□□□□ -0.73
TMEM116-209ENST00000550020 SLC4A9Q96Q91 983 aa10.49□□□□□ -0.73
TMEM116-209ENST00000550020 TNMDQ9H2S6 317 aa10.49□□□□□ -0.73
TMEM116-209ENST00000550020 NAP1L2Q9ULW6 460 aaPredicted RBP10.49□□□□□ -0.73
TMEM116-209ENST00000550020 TAF6LQ9Y6J9 622 aa10.49□□□□□ -0.73
TMEM116-209ENST00000550020 JAK2O60674 1132 aa10.48□□□□□ -0.73
TMEM116-209ENST00000550020 IDH1O75874 414 aaKnown RBP10.48□□□□□ -0.73
TMEM116-209ENST00000550020 ADAMTS2O95450 1211 aa10.48□□□□□ -0.73
TMEM116-209ENST00000550020 APPP05067 770 aa10.48□□□□□ -0.73
TMEM116-209ENST00000550020 FGFR2P21802 821 aa10.48□□□□□ -0.73
TMEM116-209ENST00000550020 MCAMP43121 646 aa10.48□□□□□ -0.73
TMEM116-209ENST00000550020 SASS6Q6UVJ0 657 aa10.48□□□□□ -0.73
TMEM116-209ENST00000550020 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.48□□□□□ -0.73
TMEM116-209ENST00000550020 CCDC73Q6ZRK6 1079 aa10.48□□□□□ -0.73
TMEM116-209ENST00000550020 BRAPQ7Z569 592 aa10.48□□□□□ -0.73
TMEM116-209ENST00000550020 SPATA5Q8NB90 893 aa10.48□□□□□ -0.73
TMEM116-209ENST00000550020 RNF214Q8ND24 703 aa10.48□□□□□ -0.73
TMEM116-209ENST00000550020 DDX11Q96FC9 970 aa10.48□□□□□ -0.73
TMEM116-209ENST00000550020 MTA3Q9BTC8 594 aa10.48□□□□□ -0.73
TMEM116-209ENST00000550020 DOT1LQ8TEK3 1739 aa10.47□□□□□ -0.73
TMEM116-209ENST00000550020 A0A0G2JS52 829 aa10.47□□□□□ -0.73
TMEM116-209ENST00000550020 GOLGA8BA8MQT2 603 aa10.47□□□□□ -0.73
TMEM116-209ENST00000550020 ZNF500O60304 480 aaPredicted RBP10.47□□□□□ -0.73
TMEM116-209ENST00000550020 IGSF3O75054 1194 aa10.47□□□□□ -0.73
TMEM116-209ENST00000550020 CAMTA2O94983 1202 aa10.47□□□□□ -0.73
TMEM116-209ENST00000550020 PDE6AP16499 860 aa10.47□□□□□ -0.73
TMEM116-209ENST00000550020 SCARF1Q14162 830 aa10.47□□□□□ -0.73
TMEM116-209ENST00000550020 SART3Q15020 963 aaKnown RBP10.47□□□□□ -0.73
TMEM116-209ENST00000550020 SUSD4Q5VX71 490 aa10.47□□□□□ -0.73
TMEM116-209ENST00000550020 SYNE3Q6ZMZ3 975 aa10.47□□□□□ -0.73
TMEM116-209ENST00000550020 MB21D2Q8IYB1 491 aaPredicted RBP10.47□□□□□ -0.73
TMEM116-209ENST00000550020 KRT23Q9C075 422 aa10.47□□□□□ -0.73
TMEM116-209ENST00000550020 CLSTN2Q9H4D0 955 aa10.47□□□□□ -0.73
TMEM116-209ENST00000550020 RCOR1Q9UKL0 485 aa10.47□□□□□ -0.73
TMEM116-209ENST00000550020 NIP7Q9Y221 180 aaKnown RBP eCLIP10.47□□□□□ -0.73
TMEM116-209ENST00000550020 ZKSCAN5Q9Y2L8 839 aa10.47□□□□□ -0.73
TMEM116-209ENST00000550020 UBN2Q6ZU65 1347 aa10.47□□□□□ -0.73
TMEM116-209ENST00000550020 RREB1Q92766 1687 aa10.47□□□□□ -0.73
TMEM116-209ENST00000550020 PHLPP1O60346 1717 aa10.47□□□□□ -0.73
TMEM116-209ENST00000550020 NWD2Q9ULI1 1742 aa10.47□□□□□ -0.73
TMEM116-209ENST00000550020 KLF18A0A0U1RQI7 1052 aa10.46□□□□□ -0.73
TMEM116-209ENST00000550020 PATL2C9JE40 543 aaKnown RBP10.46□□□□□ -0.73
TMEM116-209ENST00000550020 KDM4AO75164 1064 aa10.46□□□□□ -0.73
TMEM116-209ENST00000550020 KIAA2012Q0VF49 1180 aa10.46□□□□□ -0.73
TMEM116-209ENST00000550020 TTLL5Q6EMB2 1281 aa10.46□□□□□ -0.73
TMEM116-209ENST00000550020 TMTC2Q8N394 836 aa10.46□□□□□ -0.73
TMEM116-209ENST00000550020 MARCH10Q8NA82 808 aaPredicted RBP10.46□□□□□ -0.73
TMEM116-209ENST00000550020 FAM200AQ8TCP9 573 aa10.46□□□□□ -0.73
TMEM116-209ENST00000550020 WASF1Q92558 559 aa10.46□□□□□ -0.73
TMEM116-209ENST00000550020 C8orf76Q96K31 380 aa10.46□□□□□ -0.73
TMEM116-209ENST00000550020 NYXQ9GZU5 481 aa10.46□□□□□ -0.73
TMEM116-209ENST00000550020 PUS7LQ9H0K6 701 aaKnown RBP10.46□□□□□ -0.73
TMEM116-209ENST00000550020 RNF41Q9H4P4 317 aaPredicted RBP10.46□□□□□ -0.73
TMEM116-209ENST00000550020 USP25Q9UHP3 1055 aa10.46□□□□□ -0.73
TMEM116-209ENST00000550020 ANGEL1Q9UNK9 670 aaKnown RBP10.46□□□□□ -0.73
TMEM116-209ENST00000550020 ZNF532Q9HCE3 1301 aa10.46□□□□□ -0.73
TMEM116-209ENST00000550020 SALL1Q9NSC2 1324 aa10.46□□□□□ -0.73
TMEM116-209ENST00000550020 NRAPQ86VF7 1730 aa10.46□□□□□ -0.74
TMEM116-209ENST00000550020 ZNF831Q5JPB2 1677 aa10.45□□□□□ -0.74
TMEM116-209ENST00000550020 SLIT2O94813 1529 aa10.45□□□□□ -0.74
TMEM116-209ENST00000550020 PNPLA7Q6ZV29 1317 aa10.45□□□□□ -0.74
TMEM116-209ENST00000550020 CNTNAP4Q9C0A0 1308 aa10.45□□□□□ -0.74
TMEM116-209ENST00000550020 SEMA3EO15041 775 aa10.45□□□□□ -0.74
TMEM116-209ENST00000550020 NTSR2O95665 410 aa10.45□□□□□ -0.74
TMEM116-209ENST00000550020 HCLS1P14317 486 aaPredicted RBP10.45□□□□□ -0.74
TMEM116-209ENST00000550020 PHKA1P46020 1223 aa10.45□□□□□ -0.74
TMEM116-209ENST00000550020 TERF1P54274 439 aa10.45□□□□□ -0.74
TMEM116-209ENST00000550020 CCT2P78371 535 aaKnown RBP10.45□□□□□ -0.74
TMEM116-209ENST00000550020 TRIM29Q14134 588 aa10.45□□□□□ -0.74
TMEM116-209ENST00000550020 CAVIN4Q5BKX8 364 aa10.45□□□□□ -0.74
TMEM116-209ENST00000550020 GIMAP6Q6P9H5 292 aa10.45□□□□□ -0.74
TMEM116-209ENST00000550020 RBM43Q6ZSC3 357 aaKnown RBP10.45□□□□□ -0.74
TMEM116-209ENST00000550020 ANKRD18AQ8IVF6 992 aa10.45□□□□□ -0.74
TMEM116-209ENST00000550020 SYNE4Q8N205 404 aa10.45□□□□□ -0.74
TMEM116-209ENST00000550020 KCNG4Q8TDN1 519 aa10.45□□□□□ -0.74
TMEM116-209ENST00000550020 FUCA2Q9BTY2 467 aa10.45□□□□□ -0.74
TMEM116-209ENST00000550020 LRRC2Q9BYS8 371 aa10.45□□□□□ -0.74
TMEM116-209ENST00000550020 NAPBQ9H115 298 aa10.45□□□□□ -0.74
TMEM116-209ENST00000550020 PIH1D3Q9NQM4 214 aaKnown RBP10.45□□□□□ -0.74
TMEM116-209ENST00000550020 DACT1Q9NYF0 836 aa10.45□□□□□ -0.74
TMEM116-209ENST00000550020 TFIP11Q9UBB9 837 aaKnown RBP10.45□□□□□ -0.74
TMEM116-209ENST00000550020 LTBP4Q8N2S1 1624 aa10.44□□□□□ -0.74
TMEM116-209ENST00000550020 ERICH2A1L162 156 aa10.44□□□□□ -0.74
TMEM116-209ENST00000550020 NUTM2BA6NNL0 878 aaPredicted RBP10.44□□□□□ -0.74
TMEM116-209ENST00000550020 NUTM2EB1AL46 878 aaPredicted RBP10.44□□□□□ -0.74
TMEM116-209ENST00000550020 KINO60870 393 aaKnown RBP10.44□□□□□ -0.74
TMEM116-209ENST00000550020 CTDNEP1O95476 244 aa10.44□□□□□ -0.74
TMEM116-209ENST00000550020 YEATS4O95619 227 aa10.44□□□□□ -0.74
TMEM116-209ENST00000550020 CHGBP05060 677 aa10.44□□□□□ -0.74
TMEM116-209ENST00000550020 PCP11498 1178 aaKnown RBP10.44□□□□□ -0.74
TMEM116-209ENST00000550020 HMGB2P26583 209 aaKnown RBP10.44□□□□□ -0.74
TMEM116-209ENST00000550020 RCAN1P53805 252 aa10.44□□□□□ -0.74
TMEM116-209ENST00000550020 HAND2P61296 217 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms