RNA–Protein interactions for RNA: ENST00000549876.5

CCDC38-208, Transcript of coiled-coil domain containing 38, humanhuman

TSL 5

Gene CCDC38, Length 499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-208ENST00000549876 NOM1Q5C9Z4 860 aaKnown RBP8.89□□□□□ -0.99
CCDC38-208ENST00000549876 SLC7A3Q8WY07 619 aa8.89□□□□□ -0.99
CCDC38-208ENST00000549876 NXPE3Q969Y0 559 aa8.89□□□□□ -0.99
CCDC38-208ENST00000549876 SOX1O00570 391 aaPredicted RBP8.88□□□□□ -0.99
CCDC38-208ENST00000549876 PCSK2P16519 638 aa8.88□□□□□ -0.99
CCDC38-208ENST00000549876 FDX2Q6P4F2 183 aa8.88□□□□□ -0.99
CCDC38-208ENST00000549876 EIF1AXP47813 144 aaKnown RBP8.87□□□□□ -0.99
CCDC38-208ENST00000549876 ARL4DP49703 201 aa8.87□□□□□ -0.99
CCDC38-208ENST00000549876 C8orf34Q49A92 452 aa8.87□□□□□ -0.99
CCDC38-208ENST00000549876 VN1R5Q7Z5H4 357 aa8.87□□□□□ -0.99
CCDC38-208ENST00000549876 OSMRQ99650 979 aa8.87□□□□□ -0.99
CCDC38-208ENST00000549876 TMPRSS13Q9BYE2 586 aa8.87□□□□□ -0.99
CCDC38-208ENST00000549876 WDR64B1ANS9 1081 aa8.86□□□□□ -0.99
CCDC38-208ENST00000549876 WNT11O96014 354 aa8.86□□□□□ -0.99
CCDC38-208ENST00000549876 MPSTP25325 297 aa8.86□□□□□ -0.99
CCDC38-208ENST00000549876 MAP4P27816 1152 aaKnown RBP8.86□□□□□ -0.99
CCDC38-208ENST00000549876 BSNDQ8WZ55 320 aa8.86□□□□□ -0.99
CCDC38-208ENST00000549876 ZKSCAN3Q9BRR0 538 aa8.86□□□□□ -0.99
CCDC38-208ENST00000549876 EREGO14944 169 aa8.85□□□□□ -0.99
CCDC38-208ENST00000549876 TIAF1O95411 115 aa8.85□□□□□ -0.99
CCDC38-208ENST00000549876 HOXA10P31260 410 aaPredicted RBP8.85□□□□□ -0.99
CCDC38-208ENST00000549876 SGO2Q562F6 1265 aa8.85□□□□□ -0.99
CCDC38-208ENST00000549876 SMG8Q8ND04 991 aaKnown RBP8.85□□□□□ -0.99
CCDC38-208ENST00000549876 GAS2O43903 313 aaKnown RBP8.84□□□□□ -0.99
CCDC38-208ENST00000549876 GTF3C2Q8WUA4 911 aaPredicted RBP8.84□□□□□ -0.99
CCDC38-208ENST00000549876 MFSD14AQ96MC6 490 aa8.84□□□□□ -0.99
CCDC38-208ENST00000549876 SOX17Q9H6I2 414 aaPredicted RBP8.84□□□□□ -0.99
CCDC38-208ENST00000549876 SUGCTQ9HAC7 445 aa8.84□□□□□ -0.99
CCDC38-208ENST00000549876 LOC100289279A0A1B0GTE1 492 aa8.83□□□□□ -1
CCDC38-208ENST00000549876 TNFRSF21O75509 655 aa8.83□□□□□ -1
CCDC38-208ENST00000549876 DLGAP3O95886 979 aa8.83□□□□□ -1
CCDC38-208ENST00000549876 NPR3P17342 541 aa8.83□□□□□ -1
CCDC38-208ENST00000549876 IKBKEQ14164 716 aa8.83□□□□□ -1
CCDC38-208ENST00000549876 TTC16Q8NEE8 873 aa8.83□□□□□ -1
CCDC38-208ENST00000549876 CCDC97Q96F63 343 aaPredicted RBP8.83□□□□□ -1
CCDC38-208ENST00000549876 BHLHE41Q9C0J9 482 aaPredicted RBP8.83□□□□□ -1
CCDC38-208ENST00000549876 PIM2Q9P1W9 311 aa8.83□□□□□ -1
CCDC38-208ENST00000549876 ADGRE2Q9UHX3 823 aa8.83□□□□□ -1
CCDC38-208ENST00000549876 SERPINA10Q9UK55 444 aa8.83□□□□□ -1
CCDC38-208ENST00000549876 POLIQ9UNA4 740 aa8.83□□□□□ -1
CCDC38-208ENST00000549876 F13BP05160 661 aa8.82□□□□□ -1
CCDC38-208ENST00000549876 EDN3P14138 238 aa8.82□□□□□ -1
CCDC38-208ENST00000549876 NUTM2GQ5VZR2 741 aa8.82□□□□□ -1
CCDC38-208ENST00000549876 KRTAP4-8A0A0G2JLE6 195 aa8.81□□□□□ -1
CCDC38-208ENST00000549876 PHACTR2O75167 634 aa8.81□□□□□ -1
CCDC38-208ENST00000549876 ALKBH2Q6NS38 261 aa8.81□□□□□ -1
CCDC38-208ENST00000549876 C12orf50Q8NA57 414 aaPredicted RBP8.81□□□□□ -1
CCDC38-208ENST00000549876 RNF114Q9Y508 228 aa8.81□□□□□ -1
CCDC38-208ENST00000549876 ARID3CA6NKF2 412 aa8.8□□□□□ -1
CCDC38-208ENST00000549876 ESRRAP11474 423 aaPredicted RBP8.8□□□□□ -1
CCDC38-208ENST00000549876 SSFA2P28290 1259 aa8.8□□□□□ -1
CCDC38-208ENST00000549876 MTMR3Q13615 1198 aa8.8□□□□□ -1
CCDC38-208ENST00000549876 PEAR1Q5VY43 1037 aaPredicted RBP8.8□□□□□ -1
CCDC38-208ENST00000549876 SNX29Q8TEQ0 813 aa8.8□□□□□ -1
CCDC38-208ENST00000549876 USP26Q9BXU7 913 aa8.8□□□□□ -1
CCDC38-208ENST00000549876 CYP4F12Q9HCS2 524 aa8.8□□□□□ -1
CCDC38-208ENST00000549876 FOXD3Q9UJU5 478 aaPredicted RBP8.8□□□□□ -1
CCDC38-208ENST00000549876 TMEM88BA6NKF7 163 aa8.79□□□□□ -1
CCDC38-208ENST00000549876 CPSF6Q16630 551 aaKnown RBP eCLIP8.79□□□□□ -1
CCDC38-208ENST00000549876 MSMPQ1L6U9 139 aa8.79□□□□□ -1
CCDC38-208ENST00000549876 SHISA5Q8N114 240 aa8.79□□□□□ -1
CCDC38-208ENST00000549876 GIMAP7Q8NHV1 300 aa8.79□□□□□ -1
CCDC38-208ENST00000549876 ATG3Q9NT62 314 aa8.79□□□□□ -1
CCDC38-208ENST00000549876 FOSL1P15407 271 aa8.78□□□□□ -1
CCDC38-208ENST00000549876 YBX3P16989 372 aaKnown RBP eCLIP8.78□□□□□ -1
CCDC38-208ENST00000549876 RXRBP28702 533 aa8.78□□□□□ -1
CCDC38-208ENST00000549876 EHHADHQ08426 723 aa8.78□□□□□ -1
CCDC38-208ENST00000549876 EXOSC6Q5RKV6 272 aaKnown RBP8.78□□□□□ -1
CCDC38-208ENST00000549876 FBXL6Q8N531 539 aa8.78□□□□□ -1
CCDC38-208ENST00000549876 NRSN2Q9GZP1 204 aa8.78□□□□□ -1
CCDC38-208ENST00000549876 LATS2Q9NRM7 1088 aa8.78□□□□□ -1
CCDC38-208ENST00000549876 LEMD3Q9Y2U8 911 aa8.78□□□□□ -1
CCDC38-208ENST00000549876 FAM95CA0A1B0GW59 222 aa8.77□□□□□ -1.01
CCDC38-208ENST00000549876 DRD2P14416 443 aa8.77□□□□□ -1.01
CCDC38-208ENST00000549876 CDPF1Q6NVV7 123 aa8.77□□□□□ -1.01
CCDC38-208ENST00000549876 ABI1Q8IZP0 508 aa8.77□□□□□ -1.01
CCDC38-208ENST00000549876 C2CD4AQ8NCU7 369 aaPredicted RBP8.77□□□□□ -1.01
CCDC38-208ENST00000549876 ASAP3Q8TDY4 903 aa8.77□□□□□ -1.01
CCDC38-208ENST00000549876 FZD6O60353 706 aa8.76□□□□□ -1.01
CCDC38-208ENST00000549876 PRNPP04156 253 aa8.76□□□□□ -1.01
CCDC38-208ENST00000549876 NFXL1Q6ZNB6 911 aa8.76□□□□□ -1.01
CCDC38-208ENST00000549876 FBLIM1Q8WUP2 373 aa8.76□□□□□ -1.01
CCDC38-208ENST00000549876 EZH1Q92800 747 aaPredicted RBP8.76□□□□□ -1.01
CCDC38-208ENST00000549876 OSBPL1AQ9BXW6 950 aa8.76□□□□□ -1.01
CCDC38-208ENST00000549876 AMOTL2Q9Y2J4 779 aa8.76□□□□□ -1.01
CCDC38-208ENST00000549876 FAM13AO94988 1023 aa8.75□□□□□ -1.01
CCDC38-208ENST00000549876 USP5P45974 858 aa8.75□□□□□ -1.01
CCDC38-208ENST00000549876 SOX4Q06945 474 aaPredicted RBP8.75□□□□□ -1.01
CCDC38-208ENST00000549876 NFKBIBQ15653 356 aa8.75□□□□□ -1.01
CCDC38-208ENST00000549876 PAOXQ6QHF9 649 aa8.75□□□□□ -1.01
CCDC38-208ENST00000549876 GJD3Q8N144 294 aa8.75□□□□□ -1.01
CCDC38-208ENST00000549876 ZFYVE28Q9HCC9 887 aa8.75□□□□□ -1.01
CCDC38-208ENST00000549876 CCDC39Q9UFE4 941 aa8.75□□□□□ -1.01
CCDC38-208ENST00000549876 METTL12A8MUP2 240 aa8.74□□□□□ -1.01
CCDC38-208ENST00000549876 ADMP35318 185 aa8.74□□□□□ -1.01
CCDC38-208ENST00000549876 USP11P51784 963 aa8.74□□□□□ -1.01
CCDC38-208ENST00000549876 GSTM4Q03013 218 aa8.74□□□□□ -1.01
CCDC38-208ENST00000549876 PRKAG2Q9UGJ0 569 aa8.74□□□□□ -1.01
CCDC38-208ENST00000549876 AAMPQ13685 434 aa8.73□□□□□ -1.01
CCDC38-208ENST00000549876 ZAR1Q86SH2 424 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms