RNA–Protein interactions for RNA: ENST00000549007.1

APAF1-208, Transcript of apoptotic peptidase activating factor 1, humanhuman

TSL 1 (best) BASIC

Gene APAF1, Length 3,492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1-208ENST00000549007 CYP4X1Q8N118 509 aa5.29□□□□□ -1.56
APAF1-208ENST00000549007 SPON2Q9BUD6 331 aa5.29□□□□□ -1.56
APAF1-208ENST00000549007 SETD5Q9C0A6 1442 aa5.29□□□□□ -1.56
APAF1-208ENST00000549007 NUP155O75694 1391 aa5.28□□□□□ -1.56
APAF1-208ENST00000549007 A0A1W2PNR3 127 aa5.28□□□□□ -1.56
APAF1-208ENST00000549007 ETFBP38117 255 aa5.28□□□□□ -1.56
APAF1-208ENST00000549007 NASPP49321 788 aaPredicted RBP5.28□□□□□ -1.56
APAF1-208ENST00000549007 RNF217Q8TC41 542 aa5.28□□□□□ -1.56
APAF1-208ENST00000549007 BRD7Q9NPI1 651 aa5.28□□□□□ -1.56
APAF1-208ENST00000549007 ABI2Q9NYB9 513 aaPredicted RBP5.28□□□□□ -1.56
APAF1-208ENST00000549007 UBP1Q9NZI7 540 aa5.28□□□□□ -1.56
APAF1-208ENST00000549007 EFR3BQ9Y2G0 817 aa5.28□□□□□ -1.56
APAF1-208ENST00000549007 TMA7Q9Y2S6 64 aaKnown RBP5.28□□□□□ -1.56
APAF1-208ENST00000549007 MADDQ8WXG6 1647 aa5.28□□□□□ -1.56
APAF1-208ENST00000549007 ERBINQ96RT1 1412 aa5.28□□□□□ -1.56
APAF1-208ENST00000549007 WASHC2CQ9Y4E1 1318 aa5.28□□□□□ -1.56
APAF1-208ENST00000549007 GJA8P48165 433 aa5.28□□□□□ -1.56
APAF1-208ENST00000549007 ZNF157P51786 506 aaPredicted RBP5.28□□□□□ -1.56
APAF1-208ENST00000549007 ERMP1Q7Z2K6 904 aa5.28□□□□□ -1.56
APAF1-208ENST00000549007 C3orf58Q8NDZ4 430 aa5.28□□□□□ -1.56
APAF1-208ENST00000549007 MROH1Q8NDA8 1641 aa5.28□□□□□ -1.56
APAF1-208ENST00000549007 SBNO2Q9Y2G9 1366 aa5.28□□□□□ -1.56
APAF1-208ENST00000549007 DCDC2BA2VCK2 349 aa5.28□□□□□ -1.56
APAF1-208ENST00000549007 SPINT1O43278 529 aa5.28□□□□□ -1.56
APAF1-208ENST00000549007 CELA3AP09093 270 aa5.28□□□□□ -1.56
APAF1-208ENST00000549007 GBP2P32456 591 aaPredicted RBP5.28□□□□□ -1.56
APAF1-208ENST00000549007 TCEAL1Q15170 157 aa5.28□□□□□ -1.56
APAF1-208ENST00000549007 PDE12Q6L8Q7 609 aaKnown RBP5.28□□□□□ -1.56
APAF1-208ENST00000549007 ZNF598Q86UK7 904 aaKnown RBP5.28□□□□□ -1.56
APAF1-208ENST00000549007 GPATCH3Q96I76 525 aa5.28□□□□□ -1.56
APAF1-208ENST00000549007 GAS2L1Q99501 681 aaPredicted RBP5.28□□□□□ -1.56
APAF1-208ENST00000549007 OSBPL2Q9H1P3 480 aa5.28□□□□□ -1.56
APAF1-208ENST00000549007 EHD4Q9H223 541 aa5.28□□□□□ -1.56
APAF1-208ENST00000549007 GCC2Q8IWJ2 1684 aa5.28□□□□□ -1.56
APAF1-208ENST00000549007 AGLP35573 1532 aa5.27□□□□□ -1.57
APAF1-208ENST00000549007 MSX1P28360 303 aa5.27□□□□□ -1.57
APAF1-208ENST00000549007 PTPN12Q05209 780 aaKnown RBP5.27□□□□□ -1.57
APAF1-208ENST00000549007 GLIS3Q8NEA6 775 aa5.27□□□□□ -1.57
APAF1-208ENST00000549007 GJA3Q9Y6H8 435 aa5.27□□□□□ -1.57
APAF1-208ENST00000549007 BCORL1Q5H9F3 1711 aa5.27□□□□□ -1.57
APAF1-208ENST00000549007 RIMS1Q86UR5 1692 aaKnown RBP5.27□□□□□ -1.57
APAF1-208ENST00000549007 REREQ9P2R6 1566 aa5.27□□□□□ -1.57
APAF1-208ENST00000549007 TIMMDC1Q9NPL8 285 aa5.27□□□□□ -1.57
APAF1-208ENST00000549007 TBX22Q9Y458 520 aa5.27□□□□□ -1.57
APAF1-208ENST00000549007 SSBP05455 408 aaKnown RBP eCLIP5.27□□□□□ -1.57
APAF1-208ENST00000549007 CRKP46108 304 aa5.27□□□□□ -1.57
APAF1-208ENST00000549007 RNF144AP50876 292 aaPredicted RBP5.27□□□□□ -1.57
APAF1-208ENST00000549007 MAP3K10Q02779 954 aa5.27□□□□□ -1.57
APAF1-208ENST00000549007 TRIM67Q6ZTA4 783 aa5.27□□□□□ -1.57
APAF1-208ENST00000549007 ANAPC16Q96DE5 110 aa5.27□□□□□ -1.57
APAF1-208ENST00000549007 NSUN5Q96P11 429 aaKnown RBP5.27□□□□□ -1.57
APAF1-208ENST00000549007 TSEN34Q9BSV6 310 aaKnown RBP5.27□□□□□ -1.57
APAF1-208ENST00000549007 GINM1Q9NU53 330 aa5.27□□□□□ -1.57
APAF1-208ENST00000549007 FAM13BQ9NYF5 915 aa5.27□□□□□ -1.57
APAF1-208ENST00000549007 HCN2Q9UL51 889 aa5.27□□□□□ -1.57
APAF1-208ENST00000549007 CLTCQ00610 1675 aaKnown RBP5.26□□□□□ -1.57
APAF1-208ENST00000549007 SOBPA7XYQ1 873 aa5.26□□□□□ -1.57
APAF1-208ENST00000549007 CAPN5O15484 640 aaPredicted RBP5.26□□□□□ -1.57
APAF1-208ENST00000549007 GDF9O60383 454 aa5.26□□□□□ -1.57
APAF1-208ENST00000549007 CTC1Q2NKJ3 1217 aa5.26□□□□□ -1.57
APAF1-208ENST00000549007 COL13A1Q5TAT6 717 aaPredicted RBP5.26□□□□□ -1.57
APAF1-208ENST00000549007 KANSL2Q9H9L4 492 aa5.26□□□□□ -1.57
APAF1-208ENST00000549007 CUEDC1Q9NWM3 386 aaPredicted RBP5.26□□□□□ -1.57
APAF1-208ENST00000549007 FNDC3AQ9Y2H6 1198 aaKnown RBP5.26□□□□□ -1.57
APAF1-208ENST00000549007 CEP152O94986 1710 aa5.26□□□□□ -1.57
APAF1-208ENST00000549007 ABCC3O15438 1527 aa5.26□□□□□ -1.57
APAF1-208ENST00000549007 A0A1W2PP55 124 aa5.26□□□□□ -1.57
APAF1-208ENST00000549007 TLDC2A0PJX2 215 aa5.26□□□□□ -1.57
APAF1-208ENST00000549007 MMP20O60882 483 aa5.26□□□□□ -1.57
APAF1-208ENST00000549007 SFSWAPQ12872 951 aaKnown RBP5.26□□□□□ -1.57
APAF1-208ENST00000549007 SDE2Q6IQ49 451 aa5.26□□□□□ -1.57
APAF1-208ENST00000549007 FBXL19Q6PCT2 694 aa5.26□□□□□ -1.57
APAF1-208ENST00000549007 KIAA0825Q8IV33 1275 aa5.26□□□□□ -1.57
APAF1-208ENST00000549007 HNRNPLLQ8WVV9 542 aaKnown RBP5.26□□□□□ -1.57
APAF1-208ENST00000549007 EAF1Q96JC9 268 aaPredicted RBP5.26□□□□□ -1.57
APAF1-208ENST00000549007 OXCT2Q9BYC2 517 aaPredicted RBP5.26□□□□□ -1.57
APAF1-208ENST00000549007 ZDHHC3Q9NYG2 299 aa5.26□□□□□ -1.57
APAF1-208ENST00000549007 PPT2Q9UMR5 302 aa5.26□□□□□ -1.57
APAF1-208ENST00000549007 FER1L4A9Z1Z3 1794 aa5.26□□□□□ -1.57
APAF1-208ENST00000549007 RBL2Q08999 1139 aa5.25□□□□□ -1.57
APAF1-208ENST00000549007 IER5Q5VY09 327 aa5.25□□□□□ -1.57
APAF1-208ENST00000549007 ZFATQ9P243 1243 aa5.25□□□□□ -1.57
APAF1-208ENST00000549007 SALL4Q9UJQ4 1053 aa5.25□□□□□ -1.57
APAF1-208ENST00000549007 RNF17Q9BXT8 1623 aaKnown RBP5.25□□□□□ -1.57
APAF1-208ENST00000549007 EIF2AK4Q9P2K8 1649 aaKnown RBP5.25□□□□□ -1.57
APAF1-208ENST00000549007 ADAMTSL3P82987 1691 aa5.25□□□□□ -1.57
APAF1-208ENST00000549007 KANK1Q14678 1352 aa5.25□□□□□ -1.57
APAF1-208ENST00000549007 LYSMD3Q7Z3D4 306 aa5.25□□□□□ -1.57
APAF1-208ENST00000549007 VPS37DQ86XT2 251 aa5.25□□□□□ -1.57
APAF1-208ENST00000549007 GALNT12Q8IXK2 581 aa5.25□□□□□ -1.57
APAF1-208ENST00000549007 TOR4AQ9NXH8 423 aa5.25□□□□□ -1.57
APAF1-208ENST00000549007 CFAP65Q6ZU64 1925 aaKnown RBP5.25□□□□□ -1.57
APAF1-208ENST00000549007 PZPP20742 1482 aa5.25□□□□□ -1.57
APAF1-208ENST00000549007 PRDM15P57071 1507 aaPredicted RBP5.25□□□□□ -1.57
APAF1-208ENST00000549007 TLR3O15455 904 aaKnown RBP5.25□□□□□ -1.57
APAF1-208ENST00000549007 ZNF296Q8WUU4 475 aaPredicted RBP5.25□□□□□ -1.57
APAF1-208ENST00000549007 ABCB6Q9NP58 842 aa5.25□□□□□ -1.57
APAF1-208ENST00000549007 ZMYM3Q14202 1370 aa5.25□□□□□ -1.57
APAF1-208ENST00000549007 PTPRMP28827 1452 aa5.25□□□□□ -1.57
APAF1-208ENST00000549007 KDM5DQ9BY66 1539 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 119.9 ms