RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 KIAA1468Q9P260 1216 aa15.97■□□□□ 0.15
HDAC7-228ENST00000548938 SH3TC1Q8TE82 1336 aa15.97■□□□□ 0.15
HDAC7-228ENST00000548938 ZBTB22O15209 634 aa15.96■□□□□ 0.15
HDAC7-228ENST00000548938 CLCN6P51797 869 aa15.96■□□□□ 0.15
HDAC7-228ENST00000548938 CCDC93Q567U6 631 aa15.96■□□□□ 0.15
HDAC7-228ENST00000548938 OTUD7BQ6GQQ9 843 aa15.96■□□□□ 0.15
HDAC7-228ENST00000548938 AGXT2Q9BYV1 514 aa15.96■□□□□ 0.15
HDAC7-228ENST00000548938 OVOS2A0A0G2JMS6 1433 aa15.96■□□□□ 0.15
HDAC7-228ENST00000548938 PDIA3P30101 505 aaKnown RBP15.96■□□□□ 0.15
HDAC7-228ENST00000548938 SLC39A6Q13433 755 aa15.96■□□□□ 0.15
HDAC7-228ENST00000548938 ZRSR1Q15695 479 aaKnown RBP15.96■□□□□ 0.15
HDAC7-228ENST00000548938 ADALQ6DHV7 355 aa15.96■□□□□ 0.15
HDAC7-228ENST00000548938 KBTBD3Q8NAB2 608 aa15.96■□□□□ 0.15
HDAC7-228ENST00000548938 CCDC66A2RUB6 948 aa15.96■□□□□ 0.14
HDAC7-228ENST00000548938 PSDA5PKW4 1024 aaPredicted RBP15.96■□□□□ 0.14
HDAC7-228ENST00000548938 FDPSP14324 419 aaKnown RBP15.96■□□□□ 0.14
HDAC7-228ENST00000548938 COPS6Q7L5N1 327 aa15.96■□□□□ 0.14
HDAC7-228ENST00000548938 RTEL1Q9NZ71 1219 aa15.96■□□□□ 0.14
HDAC7-228ENST00000548938 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.96■□□□□ 0.144e-7■■■□□ 19.1
HDAC7-228ENST00000548938 FHOD1Q9Y613 1164 aa15.96■□□□□ 0.14
HDAC7-228ENST00000548938 CLIC4Q9Y696 253 aa15.96■□□□□ 0.14
HDAC7-228ENST00000548938 E7EWF7 191 aa15.95■□□□□ 0.14
HDAC7-228ENST00000548938 LINC00301Q8NCQ3 95 aa15.95■□□□□ 0.14
HDAC7-228ENST00000548938 A0A1W2PQ27 194 aa15.95■□□□□ 0.14
HDAC7-228ENST00000548938 A0A1W2PQ64 194 aa15.95■□□□□ 0.14
HDAC7-228ENST00000548938 A0A1W2PQD8 194 aa15.95■□□□□ 0.14
HDAC7-228ENST00000548938 BMS1Q14692 1282 aaKnown RBP15.95■□□□□ 0.14
HDAC7-228ENST00000548938 STK38Q15208 465 aa15.95■□□□□ 0.14
HDAC7-228ENST00000548938 ARHGAP29Q52LW3 1261 aa15.95■□□□□ 0.14
HDAC7-228ENST00000548938 GORABQ5T7V8 394 aa15.95■□□□□ 0.14
HDAC7-228ENST00000548938 UBE3BQ7Z3V4 1068 aa15.95■□□□□ 0.14
HDAC7-228ENST00000548938 BPIFA3Q9BQP9 254 aa15.95■□□□□ 0.14
HDAC7-228ENST00000548938 METTL22Q9BUU2 404 aaPredicted RBP15.95■□□□□ 0.14
HDAC7-228ENST00000548938 GOLIM4O00461 696 aa15.94■□□□□ 0.14
HDAC7-228ENST00000548938 TATP17735 454 aaPredicted RBP15.94■□□□□ 0.14
HDAC7-228ENST00000548938 PIP4K2AP48426 406 aaPredicted RBP15.94■□□□□ 0.14
HDAC7-228ENST00000548938 SF3A1Q15459 793 aaKnown RBP15.94■□□□□ 0.14
HDAC7-228ENST00000548938 MEGF6O75095 1541 aa15.94■□□□□ 0.14
HDAC7-228ENST00000548938 POLR3DP05423 398 aaPredicted RBP15.94■□□□□ 0.14
HDAC7-228ENST00000548938 NCAPHQ15003 741 aa15.94■□□□□ 0.14
HDAC7-228ENST00000548938 PRDM11Q9NQV5 511 aa15.94■□□□□ 0.14
HDAC7-228ENST00000548938 GPHNQ9NQX3 736 aaPredicted RBP15.94■□□□□ 0.14
HDAC7-228ENST00000548938 HOMER1Q86YM7 354 aa15.93■□□□□ 0.14
HDAC7-228ENST00000548938 NOL10Q9BSC4 688 aaKnown RBP15.93■□□□□ 0.14
HDAC7-228ENST00000548938 SIPA1L3O60292 1781 aaPredicted RBP15.93■□□□□ 0.14
HDAC7-228ENST00000548938 C5P01031 1676 aa15.93■□□□□ 0.14
HDAC7-228ENST00000548938 PNMA6AP0CW24 399 aaPredicted RBP15.93■□□□□ 0.14
HDAC7-228ENST00000548938 LMOD1P29536 600 aaPredicted RBP15.93■□□□□ 0.14
HDAC7-228ENST00000548938 KCNJ6P48051 423 aa15.93■□□□□ 0.14
HDAC7-228ENST00000548938 DSCC1Q9BVC3 393 aa15.93■□□□□ 0.14
HDAC7-228ENST00000548938 DNAI1Q9UI46 699 aa15.93■□□□□ 0.14
HDAC7-228ENST00000548938 PALLDQ8WX93 1383 aa15.92■□□□□ 0.14
HDAC7-228ENST00000548938 SLC3A2P08195 630 aaKnown RBP15.92■□□□□ 0.14
HDAC7-228ENST00000548938 ZNF274Q96GC6 653 aaPredicted RBP15.92■□□□□ 0.14
HDAC7-228ENST00000548938 HSPD1P10809 573 aaKnown RBP15.92■□□□□ 0.14
HDAC7-228ENST00000548938 ATP1A3P13637 1013 aa15.92■□□□□ 0.14
HDAC7-228ENST00000548938 NLRP12P59046 1061 aa15.92■□□□□ 0.14
HDAC7-228ENST00000548938 RABL6Q3YEC7 729 aaPredicted RBP15.92■□□□□ 0.14
HDAC7-228ENST00000548938 TTLL5Q6EMB2 1281 aa15.92■□□□□ 0.14
HDAC7-228ENST00000548938 ISM2Q6H9L7 571 aa15.92■□□□□ 0.14
HDAC7-228ENST00000548938 GJB4Q9NTQ9 266 aa15.92■□□□□ 0.14
HDAC7-228ENST00000548938 TMEM51Q9NW97 253 aa15.92■□□□□ 0.14
HDAC7-228ENST00000548938 PAG1Q9NWQ8 432 aa15.92■□□□□ 0.14
HDAC7-228ENST00000548938 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.92■□□□□ 0.14
HDAC7-228ENST00000548938 FANCGO15287 622 aa15.91■□□□□ 0.14
HDAC7-228ENST00000548938 ETF1P62495 437 aaKnown RBP15.91■□□□□ 0.14
HDAC7-228ENST00000548938 ZNF790Q6PG37 636 aa15.91■□□□□ 0.14
HDAC7-228ENST00000548938 KCNG4Q8TDN1 519 aa15.91■□□□□ 0.14
HDAC7-228ENST00000548938 HELLSQ9NRZ9 838 aa15.91■□□□□ 0.14
HDAC7-228ENST00000548938 SPTLC2O15270 562 aa15.91■□□□□ 0.14
HDAC7-228ENST00000548938 NRDCO43847 1150 aa15.91■□□□□ 0.14
HDAC7-228ENST00000548938 PHKG2P15735 406 aa15.91■□□□□ 0.14
HDAC7-228ENST00000548938 PLA2G4AP47712 749 aa15.91■□□□□ 0.14
HDAC7-228ENST00000548938 FANCCQ00597 558 aa15.91■□□□□ 0.14
HDAC7-228ENST00000548938 MAST3O60307 1309 aa15.91■□□□□ 0.14
HDAC7-228ENST00000548938 ATP5J2-PTCD1G3V325 749 aa15.9■□□□□ 0.14
HDAC7-228ENST00000548938 PTCD1O75127 700 aaKnown RBP15.9■□□□□ 0.14
HDAC7-228ENST00000548938 ZNF202O95125 648 aa15.9■□□□□ 0.14
HDAC7-228ENST00000548938 TPM4P67936 248 aa15.9■□□□□ 0.14
HDAC7-228ENST00000548938 ZMYM1Q5SVZ6 1142 aa15.9■□□□□ 0.14
HDAC7-228ENST00000548938 ANKRD13DQ6ZTN6 518 aa15.9■□□□□ 0.14
HDAC7-228ENST00000548938 TIGD1Q96MW7 591 aa15.9■□□□□ 0.14
HDAC7-228ENST00000548938 NEUROD6Q96NK8 337 aa15.9■□□□□ 0.14
HDAC7-228ENST00000548938 HSD3B7Q9H2F3 369 aa15.9■□□□□ 0.14
HDAC7-228ENST00000548938 MROH7-TTC4A0A0A0MT08 1334 aa15.9■□□□□ 0.14
HDAC7-228ENST00000548938 YEATS4O95619 227 aa15.9■□□□□ 0.14
HDAC7-228ENST00000548938 GTF2E1P29083 439 aaPredicted RBP15.9■□□□□ 0.14
HDAC7-228ENST00000548938 BBXQ8WY36 941 aaPredicted RBP15.9■□□□□ 0.14
HDAC7-228ENST00000548938 C8orf76Q96K31 380 aa15.9■□□□□ 0.14
HDAC7-228ENST00000548938 POLR3EQ9NVU0 708 aa15.9■□□□□ 0.14
HDAC7-228ENST00000548938 ORC3Q9UBD5 711 aaPredicted RBP15.9■□□□□ 0.14
HDAC7-228ENST00000548938 PFKFB1P16118 471 aa15.89■□□□□ 0.13
HDAC7-228ENST00000548938 MYSM1Q5VVJ2 828 aa15.89■□□□□ 0.13
HDAC7-228ENST00000548938 RAB11FIP4Q86YS3 637 aa15.89■□□□□ 0.13
HDAC7-228ENST00000548938 DPF2Q92785 391 aa15.89■□□□□ 0.13
HDAC7-228ENST00000548938 PHLPP2Q6ZVD8 1323 aa15.89■□□□□ 0.13
HDAC7-228ENST00000548938 KDM6AO15550 1401 aaPredicted RBP15.89■□□□□ 0.13
HDAC7-228ENST00000548938 CYP27B1O15528 508 aa15.89■□□□□ 0.13
HDAC7-228ENST00000548938 ZRANB2O95218 330 aaKnown RBP eCLIP15.89■□□□□ 0.131e-6■■■■■ 26.9
HDAC7-228ENST00000548938 CYP2C19P33261 490 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms