RNA–Protein interactions for RNA: ENST00000548874.5

CACNB3-210, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-210ENST00000548874 CIAPIN1Q6FI81 312 aa25.81■■□□□ 1.72
CACNB3-210ENST00000548874 USP17L1Q7RTZ2 530 aa25.81■■□□□ 1.72
CACNB3-210ENST00000548874 DENND2AQ9ULE3 1009 aa25.81■■□□□ 1.72
CACNB3-210ENST00000548874 MCAMP43121 646 aa25.8■■□□□ 1.72
CACNB3-210ENST00000548874 GTF2IP78347 998 aa25.8■■□□□ 1.72
CACNB3-210ENST00000548874 SCARF1Q14162 830 aa25.8■■□□□ 1.72
CACNB3-210ENST00000548874 PPIL4Q8WUA2 492 aaKnown RBP eCLIP25.8■■□□□ 1.72
CACNB3-210ENST00000548874 ECHDC1Q9NTX5 307 aa25.8■■□□□ 1.72
CACNB3-210ENST00000548874 MYH13Q9UKX3 1938 aa25.79■■□□□ 1.72
CACNB3-210ENST00000548874 PSMD14O00487 310 aa25.79■■□□□ 1.72
CACNB3-210ENST00000548874 FRAT2O75474 233 aaPredicted RBP25.79■■□□□ 1.72
CACNB3-210ENST00000548874 VIL1P09327 827 aaKnown RBP25.79■■□□□ 1.72
CACNB3-210ENST00000548874 ATP5JP18859 108 aa25.79■■□□□ 1.72
CACNB3-210ENST00000548874 MX1P20591 662 aa25.79■■□□□ 1.72
CACNB3-210ENST00000548874 TNIP1Q15025 636 aa25.79■■□□□ 1.72
CACNB3-210ENST00000548874 DACT2Q5SW24 774 aa25.79■■□□□ 1.72
CACNB3-210ENST00000548874 TTLL5Q6EMB2 1281 aa25.79■■□□□ 1.72
CACNB3-210ENST00000548874 HMG20BQ9P0W2 317 aa25.79■■□□□ 1.72
CACNB3-210ENST00000548874 TTC41PQ6P2S7 1318 aa25.79■■□□□ 1.72
CACNB3-210ENST00000548874 AKAP11Q9UKA4 1901 aa25.78■■□□□ 1.72
CACNB3-210ENST00000548874 PDE4AP27815 886 aa25.78■■□□□ 1.72
CACNB3-210ENST00000548874 GPATCH3Q96I76 525 aa25.78■■□□□ 1.72
CACNB3-210ENST00000548874 STAP2Q9UGK3 403 aa25.78■■□□□ 1.72
CACNB3-210ENST00000548874 FKBP1AP62942 108 aaKnown RBP25.77■■□□□ 1.72
CACNB3-210ENST00000548874 PI16Q6UXB8 463 aa25.77■■□□□ 1.72
CACNB3-210ENST00000548874 GPC2Q8N158 579 aa25.77■■□□□ 1.72
CACNB3-210ENST00000548874 SPATA5Q8NB90 893 aa25.77■■□□□ 1.72
CACNB3-210ENST00000548874 PDE1AP54750 535 aa25.76■■□□□ 1.71
CACNB3-210ENST00000548874 CHAF1AQ13111 956 aaPredicted RBP25.76■■□□□ 1.71
CACNB3-210ENST00000548874 JAG2Q9Y219 1238 aa25.76■■□□□ 1.71
CACNB3-210ENST00000548874 SALL1Q9NSC2 1324 aa25.75■■□□□ 1.71
CACNB3-210ENST00000548874 TSHZ3Q63HK5 1081 aa25.75■■□□□ 1.71
CACNB3-210ENST00000548874 RSBN1LQ6PCB5 846 aaPredicted RBP25.75■■□□□ 1.71
CACNB3-210ENST00000548874 PLEKHM2Q8IWE5 1019 aa25.75■■□□□ 1.71
CACNB3-210ENST00000548874 CERS5Q8N5B7 392 aa25.75■■□□□ 1.71
CACNB3-210ENST00000548874 WDR66Q8TBY9 1149 aa25.75■■□□□ 1.71
CACNB3-210ENST00000548874 PI4K2BQ8TCG2 481 aa25.75■■□□□ 1.71
CACNB3-210ENST00000548874 TBC1D22AQ8WUA7 517 aa25.75■■□□□ 1.71
CACNB3-210ENST00000548874 FBXW7Q969H0 707 aa25.75■■□□□ 1.71
CACNB3-210ENST00000548874 GLTPD2A6NH11 291 aa25.74■■□□□ 1.71
CACNB3-210ENST00000548874 DPY19L2Q6NUT2 758 aa25.74■■□□□ 1.71
CACNB3-210ENST00000548874 GMLQ99445 158 aa25.74■■□□□ 1.71
CACNB3-210ENST00000548874 MXD3Q9BW11 206 aa25.74■■□□□ 1.71
CACNB3-210ENST00000548874 OSBPL3Q9H4L5 887 aa25.74■■□□□ 1.71
CACNB3-210ENST00000548874 SNRKQ9NRH2 765 aa25.74■■□□□ 1.71
CACNB3-210ENST00000548874 GTF3C3Q9Y5Q9 886 aa25.74■■□□□ 1.71
CACNB3-210ENST00000548874 AOX1Q06278 1338 aa25.73■■□□□ 1.71
CACNB3-210ENST00000548874 MYO3BQ8WXR4 1341 aa25.73■■□□□ 1.71
CACNB3-210ENST00000548874 DDNO94850 711 aaPredicted RBP25.73■■□□□ 1.71
CACNB3-210ENST00000548874 ZAP70P43403 619 aa25.73■■□□□ 1.71
CACNB3-210ENST00000548874 MFSD14BQ5SR56 506 aa25.73■■□□□ 1.71
CACNB3-210ENST00000548874 AGBL3Q8NEM8 1001 aa25.73■■□□□ 1.71
CACNB3-210ENST00000548874 GJA3Q9Y6H8 435 aa25.73■■□□□ 1.71
CACNB3-210ENST00000548874 ERC2O15083 957 aa25.72■■□□□ 1.71
CACNB3-210ENST00000548874 GLRX3O76003 335 aaKnown RBP25.72■■□□□ 1.71
CACNB3-210ENST00000548874 RPS12P25398 132 aaKnown RBP25.72■■□□□ 1.71
CACNB3-210ENST00000548874 HAUS7Q99871 368 aa25.72■■□□□ 1.71
CACNB3-210ENST00000548874 BOLA2Q9H3K6 86 aa25.72■■□□□ 1.71
CACNB3-210ENST00000548874 ZBTB12Q9Y330 459 aaPredicted RBP25.72■■□□□ 1.71
CACNB3-210ENST00000548874 CYP2E1P05181 493 aaPredicted RBP25.71■■□□□ 1.71
CACNB3-210ENST00000548874 L3MBTL3Q96JM7 780 aaPredicted RBP25.71■■□□□ 1.71
CACNB3-210ENST00000548874 GMPSP49915 693 aaPredicted RBP25.7■■□□□ 1.7
CACNB3-210ENST00000548874 DPF2Q92785 391 aa25.7■■□□□ 1.7
CACNB3-210ENST00000548874 SUGT1Q9Y2Z0 365 aa25.7■■□□□ 1.7
CACNB3-210ENST00000548874 NDUFB9Q9Y6M9 179 aa25.7■■□□□ 1.7
CACNB3-210ENST00000548874 GRIK5Q16478 980 aa25.69■■□□□ 1.7
CACNB3-210ENST00000548874 ZGPATQ8N5A5 531 aaKnown RBP25.69■■□□□ 1.7
CACNB3-210ENST00000548874 WDR90Q96KV7 1748 aa25.68■■□□□ 1.7
CACNB3-210ENST00000548874 SCNN1DP51172 638 aa25.68■■□□□ 1.7
CACNB3-210ENST00000548874 TBC1D9Q6ZT07 1266 aa25.68■■□□□ 1.7
CACNB3-210ENST00000548874 DNAJC2Q99543 621 aaKnown RBP25.68■■□□□ 1.7
CACNB3-210ENST00000548874 PRDX5P30044 214 aa25.67■■□□□ 1.7
CACNB3-210ENST00000548874 ANTXR1Q9H6X2 564 aa25.67■■□□□ 1.7
CACNB3-210ENST00000548874 PIH1D3Q9NQM4 214 aaKnown RBP25.67■■□□□ 1.7
CACNB3-210ENST00000548874 PAG1Q9NWQ8 432 aa25.67■■□□□ 1.7
CACNB3-210ENST00000548874 SKAP1Q86WV1 359 aa25.66■■□□□ 1.7
CACNB3-210ENST00000548874 EDC3Q96F86 508 aaKnown RBP25.66■■□□□ 1.7
CACNB3-210ENST00000548874 GPRC5DQ9NZD1 345 aa25.66■■□□□ 1.7
CACNB3-210ENST00000548874 ABCF2Q9UG63 623 aa25.66■■□□□ 1.7
CACNB3-210ENST00000548874 DOCK2Q92608 1830 aa25.65■■□□□ 1.7
CACNB3-210ENST00000548874 GOLIM4O00461 696 aa25.65■■□□□ 1.7
CACNB3-210ENST00000548874 TTF1Q15361 905 aaPredicted RBP25.65■■□□□ 1.7
CACNB3-210ENST00000548874 SPTY2D1Q68D10 685 aaPredicted RBP25.65■■□□□ 1.7
CACNB3-210ENST00000548874 KIAA0825Q8IV33 1275 aa25.65■■□□□ 1.7
CACNB3-210ENST00000548874 IGSF3O75054 1194 aa25.64■■□□□ 1.7
CACNB3-210ENST00000548874 LDHBP07195 334 aaKnown RBP25.64■■□□□ 1.7
CACNB3-210ENST00000548874 USP17L8P0C7I0 530 aa25.64■■□□□ 1.7
CACNB3-210ENST00000548874 MMP14P50281 582 aa25.64■■□□□ 1.7
CACNB3-210ENST00000548874 ZNF280AP59817 542 aaPredicted RBP25.64■■□□□ 1.7
CACNB3-210ENST00000548874 POTECB2RU33 542 aa25.63■■□□□ 1.69
CACNB3-210ENST00000548874 ERICH6Q7L0X2 663 aa25.63■■□□□ 1.69
CACNB3-210ENST00000548874 MICALL2Q8IY33 904 aa25.63■■□□□ 1.69
CACNB3-210ENST00000548874 CNOT7Q9UIV1 285 aaKnown RBP25.63■■□□□ 1.69
CACNB3-210ENST00000548874 TTF2Q9UNY4 1162 aaKnown RBP25.63■■□□□ 1.69
CACNB3-210ENST00000548874 SHTN1A0MZ66 631 aa25.62■■□□□ 1.69
CACNB3-210ENST00000548874 F8W031 263 aaPredicted RBP25.62■■□□□ 1.69
CACNB3-210ENST00000548874 LRP2BPQ9P2M1 347 aa25.62■■□□□ 1.69
CACNB3-210ENST00000548874 SCN4AP35499 1836 aa25.62■■□□□ 1.69
CACNB3-210ENST00000548874 MYO5AQ9Y4I1 1855 aaKnown RBP25.62■■□□□ 1.69
CACNB3-210ENST00000548874 MAST3O60307 1309 aa25.62■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms