RNA–Protein interactions for RNA: ENST00000548434.1

RAPGEF3-217, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 5

Gene RAPGEF3, Length 695 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-217ENST00000548434 TDRD7Q8NHU6 1098 aaKnown RBP20.29■□□□□ 0.84
RAPGEF3-217ENST00000548434 BICC1Q9H694 974 aaKnown RBP20.29■□□□□ 0.84
RAPGEF3-217ENST00000548434 CHMP3Q9Y3E7 222 aa20.29■□□□□ 0.84
RAPGEF3-217ENST00000548434 FAM205AQ6ZU69 1335 aa20.28■□□□□ 0.84
RAPGEF3-217ENST00000548434 UBE4AQ14139 1066 aa20.28■□□□□ 0.84
RAPGEF3-217ENST00000548434 VGLL2Q8N8G2 317 aa20.28■□□□□ 0.84
RAPGEF3-217ENST00000548434 FAM84BQ96KN1 310 aaPredicted RBP20.28■□□□□ 0.84
RAPGEF3-217ENST00000548434 BEGAINQ9BUH8 593 aa20.28■□□□□ 0.84
RAPGEF3-217ENST00000548434 KCNJ4P48050 445 aa20.27■□□□□ 0.84
RAPGEF3-217ENST00000548434 ALDH1L2Q3SY69 923 aa20.27■□□□□ 0.84
RAPGEF3-217ENST00000548434 FBXW7Q969H0 707 aa20.26■□□□□ 0.83
RAPGEF3-217ENST00000548434 ABHD8Q96I13 439 aa20.26■□□□□ 0.83
RAPGEF3-217ENST00000548434 SAGE1Q9NXZ1 904 aa20.26■□□□□ 0.83
RAPGEF3-217ENST00000548434 LAMB1P07942 1786 aa20.26■□□□□ 0.83
RAPGEF3-217ENST00000548434 ARAP2Q8WZ64 1704 aa20.25■□□□□ 0.83
RAPGEF3-217ENST00000548434 UBE2Q2LH0YL09 131 aa20.25■□□□□ 0.83
RAPGEF3-217ENST00000548434 RFX5P48382 616 aaPredicted RBP20.25■□□□□ 0.83
RAPGEF3-217ENST00000548434 LRRC24Q50LG9 513 aa20.25■□□□□ 0.83
RAPGEF3-217ENST00000548434 ZNF804AQ7Z570 1209 aa20.25■□□□□ 0.83
RAPGEF3-217ENST00000548434 FBXO33Q7Z6M2 555 aa20.25■□□□□ 0.83
RAPGEF3-217ENST00000548434 CNNM1Q9NRU3 951 aa20.25■□□□□ 0.83
RAPGEF3-217ENST00000548434 RNF186Q9NXI6 227 aa20.25■□□□□ 0.83
RAPGEF3-217ENST00000548434 SSC5DA1L4H1 1573 aa20.25■□□□□ 0.83
RAPGEF3-217ENST00000548434 CCER2I3L3R5 266 aa20.24■□□□□ 0.83
RAPGEF3-217ENST00000548434 PLIN1O60240 522 aa20.24■□□□□ 0.83
RAPGEF3-217ENST00000548434 LDLRAD1Q5T700 205 aa20.24■□□□□ 0.83
RAPGEF3-217ENST00000548434 PRMT6Q96LA8 375 aaPredicted RBP20.24■□□□□ 0.83
RAPGEF3-217ENST00000548434 GYG1P46976 350 aa20.23■□□□□ 0.83
RAPGEF3-217ENST00000548434 APOBEC3FQ8IUX4 373 aaKnown RBP20.23■□□□□ 0.83
RAPGEF3-217ENST00000548434 HDAC9Q9UKV0 1011 aa20.23■□□□□ 0.83
RAPGEF3-217ENST00000548434 SPDYE2BA6NHP3 402 aa20.22■□□□□ 0.83
RAPGEF3-217ENST00000548434 SPDYE6P0CI01 402 aa20.22■□□□□ 0.83
RAPGEF3-217ENST00000548434 COL1A1P02452 1464 aaPredicted RBP20.22■□□□□ 0.83
RAPGEF3-217ENST00000548434 MROH5Q6ZUA9 1318 aa20.22■□□□□ 0.83
RAPGEF3-217ENST00000548434 FGFR2P21802 821 aa20.21■□□□□ 0.83
RAPGEF3-217ENST00000548434 HIBADHP31937 336 aaKnown RBP20.21■□□□□ 0.83
RAPGEF3-217ENST00000548434 PTPN12Q05209 780 aaKnown RBP20.21■□□□□ 0.83
RAPGEF3-217ENST00000548434 GRIK5Q16478 980 aa20.21■□□□□ 0.83
RAPGEF3-217ENST00000548434 MAP3K11Q16584 847 aa20.21■□□□□ 0.83
RAPGEF3-217ENST00000548434 CFAP100Q494V2 611 aa20.21■□□□□ 0.83
RAPGEF3-217ENST00000548434 TAF7LQ5H9L4 462 aa20.21■□□□□ 0.83
RAPGEF3-217ENST00000548434 KLHDC4Q8TBB5 520 aa20.21■□□□□ 0.83
RAPGEF3-217ENST00000548434 DEFB129Q9H1M3 183 aa20.21■□□□□ 0.83
RAPGEF3-217ENST00000548434 JAG2Q9Y219 1238 aa20.21■□□□□ 0.83
RAPGEF3-217ENST00000548434 PDE8BO95263 885 aa20.2■□□□□ 0.82
RAPGEF3-217ENST00000548434 TM4SF4P48230 202 aa20.2■□□□□ 0.82
RAPGEF3-217ENST00000548434 DLGAP5Q15398 846 aa20.2■□□□□ 0.82
RAPGEF3-217ENST00000548434 REM2Q8IYK8 340 aaPredicted RBP20.2■□□□□ 0.82
RAPGEF3-217ENST00000548434 MCOLN1Q9GZU1 580 aa20.2■□□□□ 0.82
RAPGEF3-217ENST00000548434 TNRC18O15417 2968 aaPredicted RBP20.19■□□□□ 0.82
RAPGEF3-217ENST00000548434 TRPA1O75762 1119 aa20.19■□□□□ 0.82
RAPGEF3-217ENST00000548434 CT47B1P0C2W7 299 aaPredicted RBP20.19■□□□□ 0.82
RAPGEF3-217ENST00000548434 FZD1Q9UP38 647 aa20.19■□□□□ 0.82
RAPGEF3-217ENST00000548434 ATG9AQ7Z3C6 839 aa20.18■□□□□ 0.82
RAPGEF3-217ENST00000548434 F8W031 263 aaPredicted RBP20.17■□□□□ 0.82
RAPGEF3-217ENST00000548434 RGS19P49795 217 aa20.17■□□□□ 0.82
RAPGEF3-217ENST00000548434 MFSD14BQ5SR56 506 aa20.17■□□□□ 0.82
RAPGEF3-217ENST00000548434 SERPINA10Q9UK55 444 aa20.17■□□□□ 0.82
RAPGEF3-217ENST00000548434 NOB1Q9ULX3 412 aaKnown RBP20.17■□□□□ 0.82
RAPGEF3-217ENST00000548434 PPP2R3BQ9Y5P8 575 aa20.17■□□□□ 0.82
RAPGEF3-217ENST00000548434 HTTP42858 3142 aa20.17■□□□□ 0.82
RAPGEF3-217ENST00000548434 TEPSINQ96N21 525 aa20.16■□□□□ 0.82
RAPGEF3-217ENST00000548434 SMC4Q9NTJ3 1288 aa20.16■□□□□ 0.82
RAPGEF3-217ENST00000548434 KIF16BQ96L93 1317 aa20.16■□□□□ 0.82
RAPGEF3-217ENST00000548434 CLRN2A0PK11 232 aa20.15■□□□□ 0.82
RAPGEF3-217ENST00000548434 RARSP54136 660 aaKnown RBP20.15■□□□□ 0.82
RAPGEF3-217ENST00000548434 SPDYE2Q495Y8 402 aa20.15■□□□□ 0.82
RAPGEF3-217ENST00000548434 OTOFQ9HC10 1997 aa20.15■□□□□ 0.82
RAPGEF3-217ENST00000548434 NF2P35240 595 aa20.14■□□□□ 0.81
RAPGEF3-217ENST00000548434 BCAMP50895 628 aa20.14■□□□□ 0.81
RAPGEF3-217ENST00000548434 METTL24Q5JXM2 366 aa20.14■□□□□ 0.81
RAPGEF3-217ENST00000548434 NBPF12Q5TAG4 269 aaPredicted RBP20.14■□□□□ 0.81
RAPGEF3-217ENST00000548434 SPRYD7Q5W111 196 aa20.14■□□□□ 0.81
RAPGEF3-217ENST00000548434 MRIQ9BWK5 157 aa20.14■□□□□ 0.81
RAPGEF3-217ENST00000548434 CFHR5Q9BXR6 569 aa20.14■□□□□ 0.81
RAPGEF3-217ENST00000548434 ZNF70Q9UC06 446 aaPredicted RBP20.14■□□□□ 0.81
RAPGEF3-217ENST00000548434 EYA2O00167 538 aa20.13■□□□□ 0.81
RAPGEF3-217ENST00000548434 USP2O75604 605 aaPredicted RBP20.13■□□□□ 0.81
RAPGEF3-217ENST00000548434 ARMC9Q7Z3E5 817 aa20.13■□□□□ 0.81
RAPGEF3-217ENST00000548434 CDAN1Q8IWY9 1227 aa20.13■□□□□ 0.81
RAPGEF3-217ENST00000548434 DZIP1LQ8IYY4 767 aaKnown RBP20.13■□□□□ 0.81
RAPGEF3-217ENST00000548434 TTF2Q9UNY4 1162 aaKnown RBP20.13■□□□□ 0.81
RAPGEF3-217ENST00000548434 MYH13Q9UKX3 1938 aa20.12■□□□□ 0.81
RAPGEF3-217ENST00000548434 UNCXA6NJT0 531 aa20.12■□□□□ 0.81
RAPGEF3-217ENST00000548434 ZBTB22O15209 634 aa20.12■□□□□ 0.81
RAPGEF3-217ENST00000548434 HDLBPQ00341 1268 aaKnown RBP20.12■□□□□ 0.81
RAPGEF3-217ENST00000548434 DGKZQ13574 1117 aa20.12■□□□□ 0.81
RAPGEF3-217ENST00000548434 PRKG1Q13976 671 aa20.12■□□□□ 0.81
RAPGEF3-217ENST00000548434 RASA3Q14644 834 aa20.12■□□□□ 0.81
RAPGEF3-217ENST00000548434 NOM1Q5C9Z4 860 aaKnown RBP20.12■□□□□ 0.81
RAPGEF3-217ENST00000548434 CLMNQ96JQ2 1002 aa20.12■□□□□ 0.81
RAPGEF3-217ENST00000548434 R3HDMLQ9H3Y0 253 aa20.12■□□□□ 0.81
RAPGEF3-217ENST00000548434 TDRD3Q9H7E2 651 aaKnown RBP20.12■□□□□ 0.81
RAPGEF3-217ENST00000548434 ANGEL1Q9UNK9 670 aaKnown RBP20.12■□□□□ 0.81
RAPGEF3-217ENST00000548434 IQSEC3Q9UPP2 1182 aaPredicted RBP20.12■□□□□ 0.81
RAPGEF3-217ENST00000548434 GJA5P36382 358 aa20.11■□□□□ 0.81
RAPGEF3-217ENST00000548434 CRKP46108 304 aa20.11■□□□□ 0.81
RAPGEF3-217ENST00000548434 ARHGAP45Q92619 1136 aa20.11■□□□□ 0.81
RAPGEF3-217ENST00000548434 TTLL12Q14166 644 aaPredicted RBP20.1■□□□□ 0.81
RAPGEF3-217ENST00000548434 PUM3Q15397 648 aaKnown RBP20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms