RNA–Protein interactions for RNA: ENST00000548420.1

PTCH1-217, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-217ENST00000548420 FAM89AQ96GI7 184 aa18.26■□□□□ 0.51
PTCH1-217ENST00000548420 ELP3Q9H9T3 547 aa18.26■□□□□ 0.51
PTCH1-217ENST00000548420 SEC31BQ9NQW1 1179 aa18.26■□□□□ 0.51
PTCH1-217ENST00000548420 ANKIB1Q9P2G1 1089 aa18.26■□□□□ 0.51
PTCH1-217ENST00000548420 TLR2O60603 784 aa18.25■□□□□ 0.51
PTCH1-217ENST00000548420 SGPL1O95470 568 aa18.25■□□□□ 0.51
PTCH1-217ENST00000548420 UNC93B1Q9H1C4 597 aa18.25■□□□□ 0.51
PTCH1-217ENST00000548420 SRRDQ9UH36 339 aa18.25■□□□□ 0.51
PTCH1-217ENST00000548420 RIPOR2Q9Y4F9 1068 aa18.25■□□□□ 0.51
PTCH1-217ENST00000548420 PCDHAC2Q9Y5I4 1007 aa18.25■□□□□ 0.51
PTCH1-217ENST00000548420 COL1A1P02452 1464 aaPredicted RBP18.25■□□□□ 0.51
PTCH1-217ENST00000548420 CCL15-CCL14A0A0B4J2E2 113 aa18.24■□□□□ 0.51
PTCH1-217ENST00000548420 GNRH1P01148 92 aa18.24■□□□□ 0.51
PTCH1-217ENST00000548420 NEFMP07197 916 aa18.24■□□□□ 0.51
PTCH1-217ENST00000548420 CCL15Q16663 113 aa18.24■□□□□ 0.51
PTCH1-217ENST00000548420 TRIM47Q96LD4 638 aa18.24■□□□□ 0.51
PTCH1-217ENST00000548420 FAM161BQ96MY7 647 aa18.24■□□□□ 0.51
PTCH1-217ENST00000548420 IRS2Q9Y4H2 1338 aa18.23■□□□□ 0.51
PTCH1-217ENST00000548420 OSBPP22059 807 aa18.23■□□□□ 0.51
PTCH1-217ENST00000548420 MAGEA10P43363 369 aaPredicted RBP18.23■□□□□ 0.51
PTCH1-217ENST00000548420 KIF22Q14807 665 aa18.23■□□□□ 0.51
PTCH1-217ENST00000548420 HSP90AB3PQ58FF7 597 aa18.23■□□□□ 0.51
PTCH1-217ENST00000548420 COPS6Q7L5N1 327 aa18.23■□□□□ 0.51
PTCH1-217ENST00000548420 ANKRD13AQ8IZ07 590 aa18.23■□□□□ 0.51
PTCH1-217ENST00000548420 AOX1Q06278 1338 aa18.23■□□□□ 0.51
PTCH1-217ENST00000548420 SYN1P17600 705 aa18.22■□□□□ 0.51
PTCH1-217ENST00000548420 C7orf61Q8IZ16 206 aa18.22■□□□□ 0.51
PTCH1-217ENST00000548420 IREB2P48200 963 aaKnown RBP18.21■□□□□ 0.51
PTCH1-217ENST00000548420 AIMP1Q12904 312 aaKnown RBP18.21■□□□□ 0.51
PTCH1-217ENST00000548420 RTL5Q5HYW3 569 aaPredicted RBP18.21■□□□□ 0.51
PTCH1-217ENST00000548420 KIAA0825Q8IV33 1275 aa18.21■□□□□ 0.51
PTCH1-217ENST00000548420 DIS3LQ8TF46 1054 aaKnown RBP18.21■□□□□ 0.51
PTCH1-217ENST00000548420 PAWRQ96IZ0 340 aaKnown RBP18.21■□□□□ 0.51
PTCH1-217ENST00000548420 ADAMTS8Q9UP79 889 aa18.21■□□□□ 0.51
PTCH1-217ENST00000548420 DLG5Q8TDM6 1919 aa18.21■□□□□ 0.51
PTCH1-217ENST00000548420 PSMC4P43686 418 aa18.2■□□□□ 0.5
PTCH1-217ENST00000548420 STRIP1Q5VSL9 837 aa18.2■□□□□ 0.5
PTCH1-217ENST00000548420 FAM109BQ6ICB4 259 aaPredicted RBP18.2■□□□□ 0.5
PTCH1-217ENST00000548420 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.2■□□□□ 0.5
PTCH1-217ENST00000548420 RAET1EQ8TD07 263 aa18.2■□□□□ 0.5
PTCH1-217ENST00000548420 XAGE3Q8WTP9 111 aa18.2■□□□□ 0.5
PTCH1-217ENST00000548420 FBXW7Q969H0 707 aa18.2■□□□□ 0.5
PTCH1-217ENST00000548420 MAPK8IP3Q9UPT6 1336 aa18.2■□□□□ 0.5
PTCH1-217ENST00000548420 EIF2S2P20042 333 aaKnown RBP18.19■□□□□ 0.5
PTCH1-217ENST00000548420 TMPOP42166 694 aaKnown RBP18.19■□□□□ 0.5
PTCH1-217ENST00000548420 C17orf99Q6UX52 265 aa18.19■□□□□ 0.5
PTCH1-217ENST00000548420 WDR43Q15061 677 aaKnown RBP eCLIP18.18■□□□□ 0.5
PTCH1-217ENST00000548420 SUPT20HL1Q3ZLR7 823 aa18.18■□□□□ 0.5
PTCH1-217ENST00000548420 RUNDC1Q96C34 613 aa18.18■□□□□ 0.5
PTCH1-217ENST00000548420 BIN2Q9UBW5 565 aaPredicted RBP18.18■□□□□ 0.5
PTCH1-217ENST00000548420 ZNF804BA4D1E1 1349 aa18.18■□□□□ 0.5
PTCH1-217ENST00000548420 MYO3BQ8WXR4 1341 aa18.18■□□□□ 0.5
PTCH1-217ENST00000548420 BTBD19C9JJ37 291 aa18.17■□□□□ 0.5
PTCH1-217ENST00000548420 GTF2A2P52657 109 aa18.17■□□□□ 0.5
PTCH1-217ENST00000548420 TXNRD3Q86VQ6 643 aa18.17■□□□□ 0.5
PTCH1-217ENST00000548420 MAFAQ8NHW3 353 aaPredicted RBP18.17■□□□□ 0.5
PTCH1-217ENST00000548420 ISCA1Q9BUE6 129 aa18.17■□□□□ 0.5
PTCH1-217ENST00000548420 UBE2OQ9C0C9 1292 aaKnown RBP18.17■□□□□ 0.5
PTCH1-217ENST00000548420 PPP2R3BQ9Y5P8 575 aa18.17■□□□□ 0.5
PTCH1-217ENST00000548420 XDHP47989 1333 aa18.17■□□□□ 0.5
PTCH1-217ENST00000548420 MYPNQ86TC9 1320 aa18.17■□□□□ 0.5
PTCH1-217ENST00000548420 ECM29Q5VYK3 1845 aa18.16■□□□□ 0.5
PTCH1-217ENST00000548420 CLRN2A0PK11 232 aa18.16■□□□□ 0.5
PTCH1-217ENST00000548420 TNFRSF10AO00220 468 aa18.16■□□□□ 0.5
PTCH1-217ENST00000548420 IRS4O14654 1257 aaPredicted RBP18.16■□□□□ 0.5
PTCH1-217ENST00000548420 TFRCP02786 760 aaKnown RBP18.16■□□□□ 0.5
PTCH1-217ENST00000548420 ATP2B4P23634 1241 aa18.16■□□□□ 0.5
PTCH1-217ENST00000548420 RIPK4P57078 832 aa18.16■□□□□ 0.5
PTCH1-217ENST00000548420 UBXN2AP68543 259 aa18.16■□□□□ 0.5
PTCH1-217ENST00000548420 CCDC184Q52MB2 194 aa18.16■□□□□ 0.5
PTCH1-217ENST00000548420 CDAN1Q8IWY9 1227 aa18.16■□□□□ 0.5
PTCH1-217ENST00000548420 PNISRQ8TF01 805 aaKnown RBP18.16■□□□□ 0.5
PTCH1-217ENST00000548420 DEFB118Q96PH6 123 aa18.16■□□□□ 0.5
PTCH1-217ENST00000548420 CDX2Q99626 313 aaPredicted RBP18.16■□□□□ 0.5
PTCH1-217ENST00000548420 CPA4Q9UI42 421 aa18.16■□□□□ 0.5
PTCH1-217ENST00000548420 COL2A1P02458 1487 aaPredicted RBP18.15■□□□□ 0.5
PTCH1-217ENST00000548420 ATP5J2-PTCD1G3V325 749 aa18.15■□□□□ 0.5
PTCH1-217ENST00000548420 PRKCZQ05513 592 aa18.15■□□□□ 0.5
PTCH1-217ENST00000548420 CCDC146Q8IYE0 955 aa18.15■□□□□ 0.5
PTCH1-217ENST00000548420 SYMPKQ92797 1274 aaKnown RBP18.15■□□□□ 0.5
PTCH1-217ENST00000548420 CRISPLD2Q9H0B8 497 aa18.15■□□□□ 0.5
PTCH1-217ENST00000548420 GABRQQ9UN88 632 aa18.15■□□□□ 0.5
PTCH1-217ENST00000548420 MMP14P50281 582 aa18.14■□□□□ 0.49
PTCH1-217ENST00000548420 MED23Q9ULK4 1368 aa18.14■□□□□ 0.49
PTCH1-217ENST00000548420 TMEM265A0A087WTH1 108 aa18.13■□□□□ 0.49
PTCH1-217ENST00000548420 ANP32CO43423 234 aa18.13■□□□□ 0.49
PTCH1-217ENST00000548420 FMNL1O95466 1100 aaPredicted RBP18.13■□□□□ 0.49
PTCH1-217ENST00000548420 VGLL4Q14135 290 aa18.13■□□□□ 0.49
PTCH1-217ENST00000548420 DLGAP5Q15398 846 aa18.13■□□□□ 0.49
PTCH1-217ENST00000548420 TTLL5Q6EMB2 1281 aa18.13■□□□□ 0.49
PTCH1-217ENST00000548420 PRMT6Q96LA8 375 aaPredicted RBP18.13■□□□□ 0.49
PTCH1-217ENST00000548420 HOXD10P28358 340 aa18.12■□□□□ 0.49
PTCH1-217ENST00000548420 LMOD3Q0VAK6 560 aa18.12■□□□□ 0.49
PTCH1-217ENST00000548420 MAP3K12Q12852 859 aa18.12■□□□□ 0.49
PTCH1-217ENST00000548420 RASA3Q14644 834 aa18.12■□□□□ 0.49
PTCH1-217ENST00000548420 NECAB2Q7Z6G3 386 aa18.12■□□□□ 0.49
PTCH1-217ENST00000548420 CERS5Q8N5B7 392 aa18.12■□□□□ 0.49
PTCH1-217ENST00000548420 MTMR14Q8NCE2 650 aa18.12■□□□□ 0.49
PTCH1-217ENST00000548420 PAK6Q9NQU5 681 aaPredicted RBP18.12■□□□□ 0.49
PTCH1-217ENST00000548420 BABAM1Q9NWV8 329 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms