RNA–Protein interactions for RNA: ENST00000548399.1

PRPF40B-207, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-207ENST00000548399 JAG2Q9Y219 1238 aa17.11■□□□□ 0.33
PRPF40B-207ENST00000548399 AKAP2Q9Y2D5 859 aa17.11■□□□□ 0.33
PRPF40B-207ENST00000548399 PSME4Q14997 1843 aa17.11■□□□□ 0.33
PRPF40B-207ENST00000548399 FAM205AQ6ZU69 1335 aa17.11■□□□□ 0.33
PRPF40B-207ENST00000548399 ITGBL1O95965 494 aaPredicted RBP17.1■□□□□ 0.33
PRPF40B-207ENST00000548399 FKBP1AP62942 108 aaKnown RBP17.1■□□□□ 0.33
PRPF40B-207ENST00000548399 OS9Q13438 667 aaPredicted RBP17.1■□□□□ 0.33
PRPF40B-207ENST00000548399 KIAA0825Q8IV33 1275 aa17.1■□□□□ 0.33
PRPF40B-207ENST00000548399 PGAP2Q9UHJ9 254 aa17.1■□□□□ 0.33
PRPF40B-207ENST00000548399 HDAC9Q9UKV0 1011 aa17.1■□□□□ 0.33
PRPF40B-207ENST00000548399 IQSEC3Q9UPP2 1182 aaPredicted RBP17.1■□□□□ 0.33
PRPF40B-207ENST00000548399 SURF6O75683 361 aaKnown RBP17.09■□□□□ 0.33
PRPF40B-207ENST00000548399 RRP1P56182 461 aaKnown RBP17.09■□□□□ 0.33
PRPF40B-207ENST00000548399 CERS5Q8N5B7 392 aa17.09■□□□□ 0.33
PRPF40B-207ENST00000548399 PASKQ96RG2 1323 aa17.09■□□□□ 0.33
PRPF40B-207ENST00000548399 CHAF1AQ13111 956 aaPredicted RBP17.08■□□□□ 0.32
PRPF40B-207ENST00000548399 MFSD14BQ5SR56 506 aa17.08■□□□□ 0.32
PRPF40B-207ENST00000548399 RPAP2Q8IXW5 612 aaPredicted RBP17.08■□□□□ 0.32
PRPF40B-207ENST00000548399 GNL3LQ9NVN8 582 aaKnown RBP17.08■□□□□ 0.32
PRPF40B-207ENST00000548399 A0A1B0GUL7 405 aa17.07■□□□□ 0.32
PRPF40B-207ENST00000548399 TIMM10P62072 90 aa17.07■□□□□ 0.32
PRPF40B-207ENST00000548399 TBC1D22AQ8WUA7 517 aa17.07■□□□□ 0.32
PRPF40B-207ENST00000548399 DCPSQ96C86 337 aaKnown RBP17.07■□□□□ 0.32
PRPF40B-207ENST00000548399 NOP58Q9Y2X3 529 aaKnown RBP17.07■□□□□ 0.32
PRPF40B-207ENST00000548399 ZNF646O15015 1829 aaPredicted RBP17.07■□□□□ 0.32
PRPF40B-207ENST00000548399 F8W031 263 aaPredicted RBP17.06■□□□□ 0.32
PRPF40B-207ENST00000548399 HMMRO75330 724 aa17.06■□□□□ 0.32
PRPF40B-207ENST00000548399 ADORA1P30542 326 aa17.06■□□□□ 0.32
PRPF40B-207ENST00000548399 SCARF1Q14162 830 aa17.06■□□□□ 0.32
PRPF40B-207ENST00000548399 CDC37L1Q7L3B6 337 aa17.06■□□□□ 0.32
PRPF40B-207ENST00000548399 NEUROD6Q96NK8 337 aa17.06■□□□□ 0.32
PRPF40B-207ENST00000548399 GGA3Q9NZ52 723 aa17.06■□□□□ 0.32
PRPF40B-207ENST00000548399 TRAF5O00463 557 aa17.05■□□□□ 0.32
PRPF40B-207ENST00000548399 CCDC102BQ68D86 513 aa17.05■□□□□ 0.32
PRPF40B-207ENST00000548399 KRT26Q7Z3Y9 468 aa17.05■□□□□ 0.32
PRPF40B-207ENST00000548399 XAGE2Q96GT9 111 aa17.05■□□□□ 0.32
PRPF40B-207ENST00000548399 GLIS2Q9BZE0 524 aaPredicted RBP17.05■□□□□ 0.32
PRPF40B-207ENST00000548399 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.05■□□□□ 0.32
PRPF40B-207ENST00000548399 ASTN2O75129 1339 aaPredicted RBP17.04■□□□□ 0.32
PRPF40B-207ENST00000548399 SEMA3EO15041 775 aa17.04■□□□□ 0.32
PRPF40B-207ENST00000548399 PHKA1P46020 1223 aa17.04■□□□□ 0.32
PRPF40B-207ENST00000548399 HTRA3P83110 453 aa17.04■□□□□ 0.32
PRPF40B-207ENST00000548399 DLGAP5Q15398 846 aa17.04■□□□□ 0.32
PRPF40B-207ENST00000548399 HSP90AB4PQ58FF6 505 aa17.04■□□□□ 0.32
PRPF40B-207ENST00000548399 GORABQ5T7V8 394 aa17.04■□□□□ 0.32
PRPF40B-207ENST00000548399 ANGEL2Q5VTE6 544 aaKnown RBP17.04■□□□□ 0.32
PRPF40B-207ENST00000548399 USP48Q86UV5 1035 aa17.04■□□□□ 0.32
PRPF40B-207ENST00000548399 ERC1Q8IUD2 1116 aa17.04■□□□□ 0.32
PRPF40B-207ENST00000548399 SULF1Q8IWU6 871 aa17.04■□□□□ 0.32
PRPF40B-207ENST00000548399 GPR108Q9NPR9 543 aa17.04■□□□□ 0.32
PRPF40B-207ENST00000548399 CREBZFQ9NS37 354 aa17.04■□□□□ 0.32
PRPF40B-207ENST00000548399 TTF2Q9UNY4 1162 aaKnown RBP17.04■□□□□ 0.32
PRPF40B-207ENST00000548399 TMEM88BA6NKF7 163 aa17.03■□□□□ 0.32
PRPF40B-207ENST00000548399 WNT10BO00744 389 aa17.03■□□□□ 0.32
PRPF40B-207ENST00000548399 NBPF9Q3BBW0 867 aa17.03■□□□□ 0.32
PRPF40B-207ENST00000548399 WDR66Q8TBY9 1149 aa17.03■□□□□ 0.32
PRPF40B-207ENST00000548399 DENND2AQ9ULE3 1009 aa17.03■□□□□ 0.32
PRPF40B-207ENST00000548399 EXOC6BQ9Y2D4 811 aa17.03■□□□□ 0.32
PRPF40B-207ENST00000548399 PITPNM2Q9BZ72 1349 aa17.02■□□□□ 0.32
PRPF40B-207ENST00000548399 ARAP2Q8WZ64 1704 aa17.02■□□□□ 0.32
PRPF40B-207ENST00000548399 CFAP100Q494V2 611 aa17.02■□□□□ 0.32
PRPF40B-207ENST00000548399 TNNI3KQ59H18 835 aa17.02■□□□□ 0.32
PRPF40B-207ENST00000548399 SIRT2Q8IXJ6 389 aa17.02■□□□□ 0.32
PRPF40B-207ENST00000548399 MTMR14Q8NCE2 650 aa17.02■□□□□ 0.32
PRPF40B-207ENST00000548399 FPGT-TNNI3KV9GXZ4 949 aa17.02■□□□□ 0.32
PRPF40B-207ENST00000548399 COL1A1P02452 1464 aaPredicted RBP17.01■□□□□ 0.31
PRPF40B-207ENST00000548399 ADM5C9JUS6 153 aa17.01■□□□□ 0.31
PRPF40B-207ENST00000548399 ZBTB22O15209 634 aa17.01■□□□□ 0.31
PRPF40B-207ENST00000548399 RBM5P52756 815 aaKnown RBP eCLIP17.01■□□□□ 0.31
PRPF40B-207ENST00000548399 FMR1Q06787 632 aaKnown RBP eCLIP17.01■□□□□ 0.31
PRPF40B-207ENST00000548399 ZBED3Q96IU2 234 aaPredicted RBP17.01■□□□□ 0.31
PRPF40B-207ENST00000548399 SERPINA10Q9UK55 444 aa17.01■□□□□ 0.31
PRPF40B-207ENST00000548399 SUGT1Q9Y2Z0 365 aa17.01■□□□□ 0.31
PRPF40B-207ENST00000548399 MAST3O60307 1309 aa17■□□□□ 0.31
PRPF40B-207ENST00000548399 SPDYE2BA6NHP3 402 aa17■□□□□ 0.31
PRPF40B-207ENST00000548399 MYO1BO43795 1136 aa17■□□□□ 0.31
PRPF40B-207ENST00000548399 CELF2O95319 508 aaKnown RBP17■□□□□ 0.31
PRPF40B-207ENST00000548399 SPDYE6P0CI01 402 aa17■□□□□ 0.31
PRPF40B-207ENST00000548399 RASGRF1Q13972 1273 aa17■□□□□ 0.31
PRPF40B-207ENST00000548399 GRIK5Q16478 980 aa17■□□□□ 0.31
PRPF40B-207ENST00000548399 ZNF408Q9H9D4 720 aa17■□□□□ 0.31
PRPF40B-207ENST00000548399 PDS5AQ29RF7 1337 aaKnown RBP16.99■□□□□ 0.31
PRPF40B-207ENST00000548399 CST9Q5W186 159 aa16.99■□□□□ 0.31
PRPF40B-207ENST00000548399 APOBEC3FQ8IUX4 373 aaKnown RBP16.99■□□□□ 0.31
PRPF40B-207ENST00000548399 ABT1Q9ULW3 272 aaKnown RBP16.99■□□□□ 0.31
PRPF40B-207ENST00000548399 SALL1Q9NSC2 1324 aa16.98■□□□□ 0.31
PRPF40B-207ENST00000548399 APBB1O00213 710 aa16.98■□□□□ 0.31
PRPF40B-207ENST00000548399 UQCRFS1P1P0C7P4 283 aa16.98■□□□□ 0.31
PRPF40B-207ENST00000548399 CRKP46108 304 aa16.98■□□□□ 0.31
PRPF40B-207ENST00000548399 HDLBPQ00341 1268 aaKnown RBP16.98■□□□□ 0.31
PRPF40B-207ENST00000548399 CCDC158Q5M9N0 1113 aa16.98■□□□□ 0.31
PRPF40B-207ENST00000548399 DLK2Q6UY11 383 aa16.98■□□□□ 0.31
PRPF40B-207ENST00000548399 ZGPATQ8N5A5 531 aaKnown RBP16.98■□□□□ 0.31
PRPF40B-207ENST00000548399 DNAJC5GQ8N7S2 189 aa16.98■□□□□ 0.31
PRPF40B-207ENST00000548399 TEKT1Q969V4 418 aa16.98■□□□□ 0.31
PRPF40B-207ENST00000548399 PRMT6Q96LA8 375 aaPredicted RBP16.98■□□□□ 0.31
PRPF40B-207ENST00000548399 CRBNQ96SW2 442 aa16.98■□□□□ 0.31
PRPF40B-207ENST00000548399 DBNDD2Q9BQY9 259 aa16.98■□□□□ 0.31
PRPF40B-207ENST00000548399 PCDHAC2Q9Y5I4 1007 aa16.98■□□□□ 0.31
PRPF40B-207ENST00000548399 RAB11FIP3O75154 756 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms