RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 ANKIB1Q9P2G1 1089 aa16.01■□□□□ 0.15
PTCH1-215ENST00000547672 LRP2BPQ9P2M1 347 aa16.01■□□□□ 0.15
PTCH1-215ENST00000547672 MAST3O60307 1309 aa16■□□□□ 0.15
PTCH1-215ENST00000547672 XDHP47989 1333 aa16■□□□□ 0.15
PTCH1-215ENST00000547672 ATP2B4P23634 1241 aa16■□□□□ 0.15
PTCH1-215ENST00000547672 ALDH1B1P30837 517 aa16■□□□□ 0.15
PTCH1-215ENST00000547672 DDIT3P35638 169 aa16■□□□□ 0.15
PTCH1-215ENST00000547672 RASGRF1Q13972 1273 aa16■□□□□ 0.15
PTCH1-215ENST00000547672 C15orf52Q6ZUT6 534 aaKnown RBP16■□□□□ 0.15
PTCH1-215ENST00000547672 OSBP2Q969R2 916 aa16■□□□□ 0.15
PTCH1-215ENST00000547672 AIDAQ96BJ3 306 aa16■□□□□ 0.15
PTCH1-215ENST00000547672 TTC14Q96N46 770 aa16■□□□□ 0.15
PTCH1-215ENST00000547672 GBP4Q96PP9 640 aa16■□□□□ 0.15
PTCH1-215ENST00000547672 UPF3BQ9BZI7 483 aaKnown RBP16■□□□□ 0.15
PTCH1-215ENST00000547672 AKAP11Q9UKA4 1901 aa16■□□□□ 0.15
PTCH1-215ENST00000547672 PDE6AP16499 860 aa15.99■□□□□ 0.15
PTCH1-215ENST00000547672 ALX1Q15699 326 aa15.99■□□□□ 0.15
PTCH1-215ENST00000547672 COL23A1Q86Y22 540 aaPredicted RBP15.99■□□□□ 0.15
PTCH1-215ENST00000547672 SEC62Q99442 399 aaKnown RBP15.99■□□□□ 0.15
PTCH1-215ENST00000547672 NACAP1Q9BZK3 213 aa15.99■□□□□ 0.15
PTCH1-215ENST00000547672 MYH7P12883 1935 aa15.99■□□□□ 0.15
PTCH1-215ENST00000547672 RPS6KB1P23443 525 aa15.98■□□□□ 0.15
PTCH1-215ENST00000547672 BAG6P46379 1132 aa15.98■□□□□ 0.15
PTCH1-215ENST00000547672 NFKBIBQ15653 356 aa15.98■□□□□ 0.15
PTCH1-215ENST00000547672 ZNF804AQ7Z570 1209 aa15.98■□□□□ 0.15
PTCH1-215ENST00000547672 FAM84BQ96KN1 310 aaPredicted RBP15.98■□□□□ 0.15
PTCH1-215ENST00000547672 PIH1D3Q9NQM4 214 aaKnown RBP15.98■□□□□ 0.15
PTCH1-215ENST00000547672 ZNF532Q9HCE3 1301 aa15.97■□□□□ 0.15
PTCH1-215ENST00000547672 PATL2C9JE40 543 aaKnown RBP15.97■□□□□ 0.15
PTCH1-215ENST00000547672 GOLGA6L22H0YM25 854 aa15.97■□□□□ 0.15
PTCH1-215ENST00000547672 ZNF213O14771 459 aa15.97■□□□□ 0.15
PTCH1-215ENST00000547672 GPAA1O43292 621 aa15.97■□□□□ 0.15
PTCH1-215ENST00000547672 NPR1P16066 1061 aa15.97■□□□□ 0.15
PTCH1-215ENST00000547672 AK2P54819 239 aa15.97■□□□□ 0.15
PTCH1-215ENST00000547672 FGD1P98174 961 aa15.97■□□□□ 0.15
PTCH1-215ENST00000547672 CCDC129Q6ZRS4 1044 aa15.97■□□□□ 0.15
PTCH1-215ENST00000547672 CCDC125Q86Z20 511 aa15.97■□□□□ 0.15
PTCH1-215ENST00000547672 WDR66Q8TBY9 1149 aa15.97■□□□□ 0.15
PTCH1-215ENST00000547672 ZMYM6O95789 1325 aa15.96■□□□□ 0.15
PTCH1-215ENST00000547672 M0R2C6 588 aa15.96■□□□□ 0.15
PTCH1-215ENST00000547672 GYG1P46976 350 aa15.96■□□□□ 0.15
PTCH1-215ENST00000547672 TRDNQ13061 729 aa15.96■□□□□ 0.15
PTCH1-215ENST00000547672 RAB3GAP1Q15042 981 aa15.96■□□□□ 0.15
PTCH1-215ENST00000547672 ZNF827Q17R98 1081 aa15.96■□□□□ 0.15
PTCH1-215ENST00000547672 PI16Q6UXB8 463 aa15.96■□□□□ 0.15
PTCH1-215ENST00000547672 DHX32Q7L7V1 743 aaKnown RBP15.96■□□□□ 0.15
PTCH1-215ENST00000547672 CERS3Q8IU89 383 aa15.96■□□□□ 0.15
PTCH1-215ENST00000547672 SP8Q8IXZ3 490 aa15.96■□□□□ 0.15
PTCH1-215ENST00000547672 MAGEB6Q8N7X4 407 aa15.96■□□□□ 0.15
PTCH1-215ENST00000547672 PODXL2Q9NZ53 605 aa15.96■□□□□ 0.15
PTCH1-215ENST00000547672 PNPLA7Q6ZV29 1317 aa15.95■□□□□ 0.14
PTCH1-215ENST00000547672 CASZ1Q86V15 1759 aa15.95■□□□□ 0.14
PTCH1-215ENST00000547672 TCRBV5S4A2TA0A5A2 114 aa15.95■□□□□ 0.14
PTCH1-215ENST00000547672 DDX11L8A8MPP1 907 aa15.95■□□□□ 0.14
PTCH1-215ENST00000547672 APPP05067 770 aa15.95■□□□□ 0.14
PTCH1-215ENST00000547672 CYP21A2P08686 494 aa15.95■□□□□ 0.14
PTCH1-215ENST00000547672 DDR1Q08345 913 aa15.95■□□□□ 0.14
PTCH1-215ENST00000547672 NBR1Q14596 966 aa15.95■□□□□ 0.14
PTCH1-215ENST00000547672 SLC15A2Q16348 729 aa15.95■□□□□ 0.14
PTCH1-215ENST00000547672 CCDC24Q8N4L8 307 aa15.95■□□□□ 0.14
PTCH1-215ENST00000547672 CAMKK2Q96RR4 588 aa15.95■□□□□ 0.14
PTCH1-215ENST00000547672 STRBPQ96SI9 672 aaKnown RBP15.95■□□□□ 0.14
PTCH1-215ENST00000547672 PUS7LQ9H0K6 701 aaKnown RBP15.95■□□□□ 0.14
PTCH1-215ENST00000547672 RAI14Q9P0K7 980 aa15.95■□□□□ 0.14
PTCH1-215ENST00000547672 GGA1Q9UJY5 639 aa15.95■□□□□ 0.14
PTCH1-215ENST00000547672 WDR19Q8NEZ3 1342 aa15.94■□□□□ 0.14
PTCH1-215ENST00000547672 FGAP02671 866 aa15.94■□□□□ 0.14
PTCH1-215ENST00000547672 GSTO1P78417 241 aa15.94■□□□□ 0.14
PTCH1-215ENST00000547672 ADCK5Q3MIX3 580 aa15.94■□□□□ 0.14
PTCH1-215ENST00000547672 FBXL16Q8N461 479 aa15.94■□□□□ 0.14
PTCH1-215ENST00000547672 ABCF2Q9UG63 623 aa15.94■□□□□ 0.14
PTCH1-215ENST00000547672 TNS1Q9HBL0 1735 aaKnown RBP15.94■□□□□ 0.14
PTCH1-215ENST00000547672 LDHCP07864 332 aa15.93■□□□□ 0.14
PTCH1-215ENST00000547672 MMP10P09238 476 aa15.93■□□□□ 0.14
PTCH1-215ENST00000547672 CYP7A1P22680 504 aa15.93■□□□□ 0.14
PTCH1-215ENST00000547672 NAA16Q6N069 864 aaPredicted RBP15.93■□□□□ 0.14
PTCH1-215ENST00000547672 CLEC17AQ6ZS10 378 aa15.93■□□□□ 0.14
PTCH1-215ENST00000547672 RALYLQ86SE5 291 aaKnown RBP15.93■□□□□ 0.14
PTCH1-215ENST00000547672 NCOA7Q8NI08 942 aa15.93■□□□□ 0.14
PTCH1-215ENST00000547672 MASTLQ96GX5 879 aa15.93■□□□□ 0.14
PTCH1-215ENST00000547672 SMC3Q9UQE7 1217 aa15.93■□□□□ 0.14
PTCH1-215ENST00000547672 SALL1Q9NSC2 1324 aa15.93■□□□□ 0.14
PTCH1-215ENST00000547672 E7EWF7 191 aa15.92■□□□□ 0.14
PTCH1-215ENST00000547672 SNAP23O00161 211 aa15.92■□□□□ 0.14
PTCH1-215ENST00000547672 PDCP20941 246 aa15.92■□□□□ 0.14
PTCH1-215ENST00000547672 MCM5P33992 734 aa15.92■□□□□ 0.14
PTCH1-215ENST00000547672 NT5C2P49902 561 aa15.92■□□□□ 0.14
PTCH1-215ENST00000547672 GIMAP6Q6P9H5 292 aa15.92■□□□□ 0.14
PTCH1-215ENST00000547672 SLF2Q8IX21 1173 aa15.92■□□□□ 0.14
PTCH1-215ENST00000547672 SLC16A10Q8TF71 515 aa15.92■□□□□ 0.14
PTCH1-215ENST00000547672 CNNM2Q9H8M5 875 aa15.92■□□□□ 0.14
PTCH1-215ENST00000547672 FOXD4L1Q9NU39 408 aa15.92■□□□□ 0.14
PTCH1-215ENST00000547672 WWC3Q9ULE0 1092 aa15.92■□□□□ 0.14
PTCH1-215ENST00000547672 NSFL1CQ9UNZ2 370 aaKnown RBP15.92■□□□□ 0.14
PTCH1-215ENST00000547672 ATP6V0A2Q9Y487 856 aa15.92■□□□□ 0.14
PTCH1-215ENST00000547672 KIF3AQ9Y496 699 aa15.92■□□□□ 0.14
PTCH1-215ENST00000547672 A0A1B0GUL6 1792 aa15.91■□□□□ 0.14
PTCH1-215ENST00000547672 MAGEB6P1A0A0J9YX57 407 aa15.91■□□□□ 0.14
PTCH1-215ENST00000547672 H0YIN7 160 aa15.91■□□□□ 0.14
PTCH1-215ENST00000547672 PPEF1O14829 653 aaPredicted RBP15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms