RNA–Protein interactions for RNA: ENST00000546961.1

SCN8A-204, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best)

Gene SCN8A, Length 465 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-204ENST00000546961 ANGEL1Q9UNK9 670 aaKnown RBP25.47■■□□□ 1.67
SCN8A-204ENST00000546961 GRM8O00222 908 aa25.46■■□□□ 1.67
SCN8A-204ENST00000546961 IL1R1P14778 569 aa25.46■■□□□ 1.67
SCN8A-204ENST00000546961 FAM9BQ8IZU0 186 aa25.46■■□□□ 1.67
SCN8A-204ENST00000546961 CNNM1Q9NRU3 951 aa25.46■■□□□ 1.67
SCN8A-204ENST00000546961 JAG2Q9Y219 1238 aa25.46■■□□□ 1.67
SCN8A-204ENST00000546961 PCDHAC2Q9Y5I4 1007 aa25.46■■□□□ 1.67
SCN8A-204ENST00000546961 LDLRAD1Q5T700 205 aa25.45■■□□□ 1.66
SCN8A-204ENST00000546961 SLC4A10Q6U841 1118 aa25.45■■□□□ 1.66
SCN8A-204ENST00000546961 ZNF296Q8WUU4 475 aaPredicted RBP25.45■■□□□ 1.66
SCN8A-204ENST00000546961 FZD1Q9UP38 647 aa25.45■■□□□ 1.66
SCN8A-204ENST00000546961 ZNF316A6NFI3 1004 aaPredicted RBP25.44■■□□□ 1.66
SCN8A-204ENST00000546961 SOX10P56693 466 aa25.44■■□□□ 1.66
SCN8A-204ENST00000546961 CFAP100Q494V2 611 aa25.44■■□□□ 1.66
SCN8A-204ENST00000546961 MTMR14Q8NCE2 650 aa25.44■■□□□ 1.66
SCN8A-204ENST00000546961 SREBF2Q12772 1141 aa25.43■■□□□ 1.66
SCN8A-204ENST00000546961 SLC10A4Q96EP9 437 aa25.43■■□□□ 1.66
SCN8A-204ENST00000546961 PRMT6Q96LA8 375 aaPredicted RBP25.43■■□□□ 1.66
SCN8A-204ENST00000546961 CACNA1FO60840 1977 aa25.43■■□□□ 1.66
SCN8A-204ENST00000546961 MYO1BO43795 1136 aa25.42■■□□□ 1.66
SCN8A-204ENST00000546961 ALDH1L1O75891 902 aa25.42■■□□□ 1.66
SCN8A-204ENST00000546961 SPRYD7Q5W111 196 aa25.42■■□□□ 1.66
SCN8A-204ENST00000546961 SRCIN1Q9C0H9 1055 aa25.42■■□□□ 1.66
SCN8A-204ENST00000546961 CLRN2A0PK11 232 aa25.41■■□□□ 1.66
SCN8A-204ENST00000546961 GPR25O00155 361 aa25.41■■□□□ 1.66
SCN8A-204ENST00000546961 RBM5P52756 815 aaKnown RBP eCLIP25.41■■□□□ 1.66
SCN8A-204ENST00000546961 FKBP1AP62942 108 aaKnown RBP25.4■■□□□ 1.66
SCN8A-204ENST00000546961 VEZTQ9HBM0 779 aa25.4■■□□□ 1.66
SCN8A-204ENST00000546961 ZNF646O15015 1829 aaPredicted RBP25.4■■□□□ 1.66
SCN8A-204ENST00000546961 SPDYE2BA6NHP3 402 aa25.39■■□□□ 1.66
SCN8A-204ENST00000546961 PPP1R12BO60237 982 aaPredicted RBP25.39■■□□□ 1.66
SCN8A-204ENST00000546961 SPDYE6P0CI01 402 aa25.39■■□□□ 1.66
SCN8A-204ENST00000546961 ZEB1P37275 1124 aaPredicted RBP25.39■■□□□ 1.66
SCN8A-204ENST00000546961 PKN2Q16513 984 aaKnown RBP25.39■■□□□ 1.66
SCN8A-204ENST00000546961 SUPT20HL1Q3ZLR7 823 aa25.39■■□□□ 1.66
SCN8A-204ENST00000546961 HPS5Q9UPZ3 1129 aa25.39■■□□□ 1.66
SCN8A-204ENST00000546961 PUS3Q9BZE2 481 aaKnown RBP25.38■■□□□ 1.65
SCN8A-204ENST00000546961 R3HDMLQ9H3Y0 253 aa25.38■■□□□ 1.65
SCN8A-204ENST00000546961 PPP2R3BQ9Y5P8 575 aa25.38■■□□□ 1.65
SCN8A-204ENST00000546961 HIBADHP31937 336 aaKnown RBP25.37■■□□□ 1.65
SCN8A-204ENST00000546961 GYG1P46976 350 aa25.37■■□□□ 1.65
SCN8A-204ENST00000546961 UBE4AQ14139 1066 aa25.37■■□□□ 1.65
SCN8A-204ENST00000546961 NBPF12Q5TAG4 269 aaPredicted RBP25.37■■□□□ 1.65
SCN8A-204ENST00000546961 SUCLG2Q96I99 432 aa25.37■■□□□ 1.65
SCN8A-204ENST00000546961 CLMNQ96JQ2 1002 aa25.37■■□□□ 1.65
SCN8A-204ENST00000546961 AOX1Q06278 1338 aa25.37■■□□□ 1.65
SCN8A-204ENST00000546961 MAP3K11Q16584 847 aa25.36■■□□□ 1.65
SCN8A-204ENST00000546961 TDRD7Q8NHU6 1098 aaKnown RBP25.36■■□□□ 1.65
SCN8A-204ENST00000546961 FAM84BQ96KN1 310 aaPredicted RBP25.36■■□□□ 1.65
SCN8A-204ENST00000546961 FAM205AQ6ZU69 1335 aa25.36■■□□□ 1.65
SCN8A-204ENST00000546961 FKTNO75072 461 aa25.35■■□□□ 1.65
SCN8A-204ENST00000546961 NBPF7P0C2Y1 421 aaPredicted RBP25.35■■□□□ 1.65
SCN8A-204ENST00000546961 INHBEP58166 350 aa25.35■■□□□ 1.65
SCN8A-204ENST00000546961 NOM1Q5C9Z4 860 aaKnown RBP25.35■■□□□ 1.65
SCN8A-204ENST00000546961 KAZALD1Q96I82 304 aa25.35■■□□□ 1.65
SCN8A-204ENST00000546961 MANSC4A6NHS7 340 aaPredicted RBP25.34■■□□□ 1.65
SCN8A-204ENST00000546961 ALDH1A1P00352 501 aa25.34■■□□□ 1.65
SCN8A-204ENST00000546961 RASA3Q14644 834 aa25.34■■□□□ 1.65
SCN8A-204ENST00000546961 MFSD14BQ5SR56 506 aa25.34■■□□□ 1.65
SCN8A-204ENST00000546961 TTF2Q9UNY4 1162 aaKnown RBP25.34■■□□□ 1.65
SCN8A-204ENST00000546961 USP2O75604 605 aaPredicted RBP25.33■■□□□ 1.65
SCN8A-204ENST00000546961 WNK4Q96J92 1243 aa25.33■■□□□ 1.65
SCN8A-204ENST00000546961 CFHR5Q9BXR6 569 aa25.33■■□□□ 1.65
SCN8A-204ENST00000546961 RIPOR2Q9Y4F9 1068 aa25.33■■□□□ 1.65
SCN8A-204ENST00000546961 COL1A1P02452 1464 aaPredicted RBP25.33■■□□□ 1.65
SCN8A-204ENST00000546961 IREB2P48200 963 aaKnown RBP25.32■■□□□ 1.64
SCN8A-204ENST00000546961 IFNL1Q8IU54 200 aa25.32■■□□□ 1.64
SCN8A-204ENST00000546961 TDRD3Q9H7E2 651 aaKnown RBP25.32■■□□□ 1.64
SCN8A-204ENST00000546961 ZNF70Q9UC06 446 aaPredicted RBP25.32■■□□□ 1.64
SCN8A-204ENST00000546961 PDE4DIPQ5VU43 2346 aa25.31■■□□□ 1.64
SCN8A-204ENST00000546961 ZBTB48P10074 688 aaPredicted RBP25.31■■□□□ 1.64
SCN8A-204ENST00000546961 SERPINA10Q9UK55 444 aa25.31■■□□□ 1.64
SCN8A-204ENST00000546961 UNCXA6NJT0 531 aa25.3■■□□□ 1.64
SCN8A-204ENST00000546961 FBXO46Q6PJ61 603 aaPredicted RBP25.3■■□□□ 1.64
SCN8A-204ENST00000546961 VPS37DQ86XT2 251 aa25.3■■□□□ 1.64
SCN8A-204ENST00000546961 MRPL50Q8N5N7 158 aaKnown RBP25.3■■□□□ 1.64
SCN8A-204ENST00000546961 BICC1Q9H694 974 aaKnown RBP25.3■■□□□ 1.64
SCN8A-204ENST00000546961 IQSEC3Q9UPP2 1182 aaPredicted RBP25.3■■□□□ 1.64
SCN8A-204ENST00000546961 MROH5Q6ZUA9 1318 aa25.3■■□□□ 1.64
SCN8A-204ENST00000546961 SLC34A2O95436 690 aa25.29■■□□□ 1.64
SCN8A-204ENST00000546961 SPDYE2Q495Y8 402 aa25.29■■□□□ 1.64
SCN8A-204ENST00000546961 SSC5DA1L4H1 1573 aa25.29■■□□□ 1.64
SCN8A-204ENST00000546961 UTYO14607 1347 aa25.29■■□□□ 1.64
SCN8A-204ENST00000546961 TNFAIP1Q13829 316 aa25.28■■□□□ 1.64
SCN8A-204ENST00000546961 LRRC24Q50LG9 513 aa25.28■■□□□ 1.64
SCN8A-204ENST00000546961 FBXO33Q7Z6M2 555 aa25.28■■□□□ 1.64
SCN8A-204ENST00000546961 DZIP1LQ8IYY4 767 aaKnown RBP25.28■■□□□ 1.64
SCN8A-204ENST00000546961 ANKRD13AQ8IZ07 590 aa25.28■■□□□ 1.64
SCN8A-204ENST00000546961 IGF2BP3O00425 579 aaKnown RBP eCLIP25.27■■□□□ 1.64
SCN8A-204ENST00000546961 FRAT2O75474 233 aaPredicted RBP25.27■■□□□ 1.64
SCN8A-204ENST00000546961 CHAF1AQ13111 956 aaPredicted RBP25.27■■□□□ 1.64
SCN8A-204ENST00000546961 METTL24Q5JXM2 366 aa25.27■■□□□ 1.64
SCN8A-204ENST00000546961 TCP10L2B9ZVM9 353 aa25.26■■□□□ 1.63
SCN8A-204ENST00000546961 GJA5P36382 358 aa25.26■■□□□ 1.63
SCN8A-204ENST00000546961 CRKP46108 304 aa25.26■■□□□ 1.63
SCN8A-204ENST00000546961 GRIK5Q16478 980 aa25.26■■□□□ 1.63
SCN8A-204ENST00000546961 RABL6Q3YEC7 729 aaPredicted RBP25.26■■□□□ 1.63
SCN8A-204ENST00000546961 OTUD7BQ6GQQ9 843 aa25.26■■□□□ 1.63
SCN8A-204ENST00000546961 ANKRD44Q8N8A2 993 aa25.26■■□□□ 1.63
SCN8A-204ENST00000546961 ZNF521Q96K83 1311 aa25.26■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms