RNA–Protein interactions for RNA: ENST00000546898.1

DDX54-204, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-204ENST00000546898 VPS37DQ86XT2 251 aa19.78■□□□□ 0.76
DDX54-204ENST00000546898 LPIN2Q92539 896 aa19.78■□□□□ 0.76
DDX54-204ENST00000546898 SIL1Q9H173 461 aa19.78■□□□□ 0.76
DDX54-204ENST00000546898 MKRN1Q9UHC7 482 aaKnown RBP19.78■□□□□ 0.76
DDX54-204ENST00000546898 CELF2O95319 508 aaKnown RBP19.77■□□□□ 0.76
DDX54-204ENST00000546898 MS4A1P11836 297 aa19.77■□□□□ 0.76
DDX54-204ENST00000546898 SLC5A1P13866 664 aa19.77■□□□□ 0.76
DDX54-204ENST00000546898 CST9Q5W186 159 aa19.77■□□□□ 0.76
DDX54-204ENST00000546898 USP48Q86UV5 1035 aa19.77■□□□□ 0.76
DDX54-204ENST00000546898 SULF1Q8IWU6 871 aa19.77■□□□□ 0.76
DDX54-204ENST00000546898 CERS5Q8N5B7 392 aa19.77■□□□□ 0.76
DDX54-204ENST00000546898 CEP126Q9P2H0 1117 aa19.77■□□□□ 0.76
DDX54-204ENST00000546898 ABT1Q9ULW3 272 aaKnown RBP19.77■□□□□ 0.76
DDX54-204ENST00000546898 THSD7BQ9C0I4 1608 aa19.76■□□□□ 0.75
DDX54-204ENST00000546898 ANGEL2Q5VTE6 544 aaKnown RBP19.76■□□□□ 0.75
DDX54-204ENST00000546898 ITPRIPQ8IWB1 547 aa19.76■□□□□ 0.75
DDX54-204ENST00000546898 PA2G4Q9UQ80 394 aaKnown RBP19.76■□□□□ 0.75
DDX54-204ENST00000546898 ASTN2O75129 1339 aaPredicted RBP19.76■□□□□ 0.75
DDX54-204ENST00000546898 ADM5C9JUS6 153 aa19.75■□□□□ 0.75
DDX54-204ENST00000546898 WNT10BO00744 389 aa19.75■□□□□ 0.75
DDX54-204ENST00000546898 RLBP1P12271 317 aa19.75■□□□□ 0.75
DDX54-204ENST00000546898 DEFB115Q30KQ5 88 aa19.75■□□□□ 0.75
DDX54-204ENST00000546898 TLL2Q9Y6L7 1015 aa19.75■□□□□ 0.75
DDX54-204ENST00000546898 ATP2B3Q16720 1220 aa19.74■□□□□ 0.75
DDX54-204ENST00000546898 NBPF9Q3BBW0 867 aa19.74■□□□□ 0.75
DDX54-204ENST00000546898 MFSD14BQ5SR56 506 aa19.74■□□□□ 0.75
DDX54-204ENST00000546898 MTMR14Q8NCE2 650 aa19.74■□□□□ 0.75
DDX54-204ENST00000546898 ZBED3Q96IU2 234 aaPredicted RBP19.74■□□□□ 0.75
DDX54-204ENST00000546898 FRAT2O75474 233 aaPredicted RBP19.73■□□□□ 0.75
DDX54-204ENST00000546898 TBC1D22AQ8WUA7 517 aa19.73■□□□□ 0.75
DDX54-204ENST00000546898 ZNF408Q9H9D4 720 aa19.73■□□□□ 0.75
DDX54-204ENST00000546898 RCAN3Q9UKA8 241 aa19.73■□□□□ 0.75
DDX54-204ENST00000546898 JAG2Q9Y219 1238 aa19.73■□□□□ 0.75
DDX54-204ENST00000546898 COL1A1P02452 1464 aaPredicted RBP19.73■□□□□ 0.75
DDX54-204ENST00000546898 ZBTB7BO15156 539 aaPredicted RBP19.72■□□□□ 0.75
DDX54-204ENST00000546898 BCAMP50895 628 aa19.72■□□□□ 0.75
DDX54-204ENST00000546898 SAPCD2Q86UD0 394 aa19.72■□□□□ 0.75
DDX54-204ENST00000546898 HHIPL1Q96JK4 782 aa19.72■□□□□ 0.75
DDX54-204ENST00000546898 PAPPA2Q9BXP8 1791 aa19.72■□□□□ 0.75
DDX54-204ENST00000546898 PNMA6EA0A0J9YXQ4 647 aa19.71■□□□□ 0.75
DDX54-204ENST00000546898 F8W031 263 aaPredicted RBP19.71■□□□□ 0.75
DDX54-204ENST00000546898 VEGFBP49765 207 aa19.71■□□□□ 0.75
DDX54-204ENST00000546898 DLGAP5Q15398 846 aa19.71■□□□□ 0.75
DDX54-204ENST00000546898 APOBEC3FQ8IUX4 373 aaKnown RBP19.71■□□□□ 0.75
DDX54-204ENST00000546898 CDCA5Q96FF9 252 aa19.71■□□□□ 0.75
DDX54-204ENST00000546898 IQSEC3Q9UPP2 1182 aaPredicted RBP19.71■□□□□ 0.75
DDX54-204ENST00000546898 ZBTB22O15209 634 aa19.7■□□□□ 0.74
DDX54-204ENST00000546898 ECE1P42892 770 aa19.7■□□□□ 0.74
DDX54-204ENST00000546898 CFAP100Q494V2 611 aa19.7■□□□□ 0.74
DDX54-204ENST00000546898 PANK1Q8TE04 598 aa19.7■□□□□ 0.74
DDX54-204ENST00000546898 GBA2Q9HCG7 927 aaPredicted RBP19.7■□□□□ 0.74
DDX54-204ENST00000546898 AKAP2Q9Y2D5 859 aa19.7■□□□□ 0.74
DDX54-204ENST00000546898 ATP8B2P98198 1209 aa19.69■□□□□ 0.74
DDX54-204ENST00000546898 CHAF1AQ13111 956 aaPredicted RBP19.69■□□□□ 0.74
DDX54-204ENST00000546898 POLA2Q14181 598 aa19.69■□□□□ 0.74
DDX54-204ENST00000546898 DLK2Q6UY11 383 aa19.69■□□□□ 0.74
DDX54-204ENST00000546898 SSH3Q8TE77 659 aa19.69■□□□□ 0.74
DDX54-204ENST00000546898 GNL3LQ9NVN8 582 aaKnown RBP19.69■□□□□ 0.74
DDX54-204ENST00000546898 SERPINA10Q9UK55 444 aa19.69■□□□□ 0.74
DDX54-204ENST00000546898 TTF2Q9UNY4 1162 aaKnown RBP19.69■□□□□ 0.74
DDX54-204ENST00000546898 WDR33Q9C0J8 1336 aaKnown RBP19.69■□□□□ 0.74
DDX54-204ENST00000546898 SPDYE2BA6NHP3 402 aa19.68■□□□□ 0.74
DDX54-204ENST00000546898 MYO1BO43795 1136 aa19.68■□□□□ 0.74
DDX54-204ENST00000546898 SPDYE6P0CI01 402 aa19.68■□□□□ 0.74
DDX54-204ENST00000546898 PAXIP1Q6ZW49 1069 aaPredicted RBP19.68■□□□□ 0.74
DDX54-204ENST00000546898 C2orf69Q8N8R5 385 aa19.68■□□□□ 0.74
DDX54-204ENST00000546898 C1orf115Q9H7X2 142 aa19.68■□□□□ 0.74
DDX54-204ENST00000546898 SUGT1Q9Y2Z0 365 aa19.68■□□□□ 0.74
DDX54-204ENST00000546898 SEMA3EO15041 775 aa19.67■□□□□ 0.74
DDX54-204ENST00000546898 FKBP1BP68106 108 aa19.67■□□□□ 0.74
DDX54-204ENST00000546898 HDLBPQ00341 1268 aaKnown RBP19.67■□□□□ 0.74
DDX54-204ENST00000546898 TFCP2Q12800 502 aa19.67■□□□□ 0.74
DDX54-204ENST00000546898 G3BP1Q13283 466 aaKnown RBP eCLIP19.67■□□□□ 0.742e-6■■■■□ 24.1
DDX54-204ENST00000546898 MVPQ14764 893 aaKnown RBP19.67■□□□□ 0.74
DDX54-204ENST00000546898 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.67■□□□□ 0.74
DDX54-204ENST00000546898 WDR66Q8TBY9 1149 aa19.67■□□□□ 0.74
DDX54-204ENST00000546898 CAPNS2Q96L46 248 aa19.67■□□□□ 0.74
DDX54-204ENST00000546898 DDX19BQ9UMR2 479 aa19.67■□□□□ 0.74
DDX54-204ENST00000546898 MAST3O60307 1309 aa19.67■□□□□ 0.74
DDX54-204ENST00000546898 A0A1B0GUL7 405 aa19.66■□□□□ 0.74
DDX54-204ENST00000546898 RBM5P52756 815 aaKnown RBP eCLIP19.66■□□□□ 0.74
DDX54-204ENST00000546898 HUNKP57058 714 aa19.66■□□□□ 0.74
DDX54-204ENST00000546898 CYP4F22Q6NT55 531 aa19.66■□□□□ 0.74
DDX54-204ENST00000546898 PCNTO95613 3336 aa19.66■□□□□ 0.74
DDX54-204ENST00000546898 HSPA1AP0DMV8 641 aaKnown RBP19.65■□□□□ 0.74
DDX54-204ENST00000546898 HSPA1BP0DMV9 641 aaKnown RBP19.65■□□□□ 0.74
DDX54-204ENST00000546898 PRMT6Q96LA8 375 aaPredicted RBP19.65■□□□□ 0.74
DDX54-204ENST00000546898 CHMP4BQ9H444 224 aaKnown RBP19.65■□□□□ 0.74
DDX54-204ENST00000546898 DENND2AQ9ULE3 1009 aa19.65■□□□□ 0.74
DDX54-204ENST00000546898 PPP2R3BQ9Y5P8 575 aa19.65■□□□□ 0.74
DDX54-204ENST00000546898 NF2P35240 595 aa19.64■□□□□ 0.73
DDX54-204ENST00000546898 PHKA1P46020 1223 aa19.64■□□□□ 0.73
DDX54-204ENST00000546898 CRKP46108 304 aa19.64■□□□□ 0.73
DDX54-204ENST00000546898 COL13A1Q5TAT6 717 aaPredicted RBP19.64■□□□□ 0.73
DDX54-204ENST00000546898 CCDC102BQ68D86 513 aa19.64■□□□□ 0.73
DDX54-204ENST00000546898 CEP85Q6P2H3 762 aa19.64■□□□□ 0.73
DDX54-204ENST00000546898 MRIQ9BWK5 157 aa19.64■□□□□ 0.73
DDX54-204ENST00000546898 PCDHAC2Q9Y5I4 1007 aa19.64■□□□□ 0.73
DDX54-204ENST00000546898 PDS5AQ29RF7 1337 aaKnown RBP19.64■□□□□ 0.73
DDX54-204ENST00000546898 SALL1Q9NSC2 1324 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms