RNA–Protein interactions for RNA: ENST00000546882.5

RFX4-207, Transcript of regulatory factor X4, humanhuman

TSL 3

Gene RFX4, Length 660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-207ENST00000546882 DLG5Q8TDM6 1919 aa11.33□□□□□ -0.6
RFX4-207ENST00000546882 C6orf229H3BNL8 230 aa11.33□□□□□ -0.6
RFX4-207ENST00000546882 ARMC5Q96C12 935 aa11.33□□□□□ -0.6
RFX4-207ENST00000546882 TRIM17Q9Y577 477 aa11.33□□□□□ -0.6
RFX4-207ENST00000546882 SREBF2Q12772 1141 aa11.32□□□□□ -0.6
RFX4-207ENST00000546882 PROSER3Q2NL68 480 aa11.32□□□□□ -0.6
RFX4-207ENST00000546882 PPP4R3BQ5MIZ7 849 aa11.32□□□□□ -0.6
RFX4-207ENST00000546882 POTEEQ6S8J3 1075 aa11.32□□□□□ -0.6
RFX4-207ENST00000546882 ZNF454Q8N9F8 522 aa11.32□□□□□ -0.6
RFX4-207ENST00000546882 AGBL3Q8NEM8 1001 aa11.32□□□□□ -0.6
RFX4-207ENST00000546882 TBC1D16Q8TBP0 767 aa11.32□□□□□ -0.6
RFX4-207ENST00000546882 TRMT112Q9UI30 125 aaKnown RBP11.32□□□□□ -0.6
RFX4-207ENST00000546882 PTPN22Q9Y2R2 807 aa11.32□□□□□ -0.6
RFX4-207ENST00000546882 SH3TC1Q8TE82 1336 aa11.32□□□□□ -0.6
RFX4-207ENST00000546882 ANXA1P04083 346 aa11.31□□□□□ -0.6
RFX4-207ENST00000546882 CAP1Q01518 475 aa11.31□□□□□ -0.6
RFX4-207ENST00000546882 PTPN12Q05209 780 aaKnown RBP11.31□□□□□ -0.6
RFX4-207ENST00000546882 RSBN1LQ6PCB5 846 aaPredicted RBP11.31□□□□□ -0.6
RFX4-207ENST00000546882 PNISRQ8TF01 805 aaKnown RBP11.31□□□□□ -0.6
RFX4-207ENST00000546882 EYA3Q99504 573 aa11.31□□□□□ -0.6
RFX4-207ENST00000546882 MYOZ2Q9NPC6 264 aa11.31□□□□□ -0.6
RFX4-207ENST00000546882 H0YGN5 161 aa11.3□□□□□ -0.6
RFX4-207ENST00000546882 U2AF1L5P0DN76 240 aaPredicted RBP11.3□□□□□ -0.6
RFX4-207ENST00000546882 FOSBP53539 338 aa11.3□□□□□ -0.6
RFX4-207ENST00000546882 U2AF1Q01081 240 aaKnown RBP eCLIP11.3□□□□□ -0.6
RFX4-207ENST00000546882 TCIRG1Q13488 830 aa11.3□□□□□ -0.6
RFX4-207ENST00000546882 SF3B3Q15393 1217 aaKnown RBP11.3□□□□□ -0.6
RFX4-207ENST00000546882 SPRYD7Q5W111 196 aa11.3□□□□□ -0.6
RFX4-207ENST00000546882 NECTIN2Q92692 538 aa11.3□□□□□ -0.6
RFX4-207ENST00000546882 LAMB1P07942 1786 aa11.29□□□□□ -0.6
RFX4-207ENST00000546882 ALDH1A1P00352 501 aa11.29□□□□□ -0.6
RFX4-207ENST00000546882 USP17L8P0C7I0 530 aa11.29□□□□□ -0.6
RFX4-207ENST00000546882 PBX2P40425 430 aa11.29□□□□□ -0.6
RFX4-207ENST00000546882 CNGB1Q14028 1251 aaPredicted RBP11.29□□□□□ -0.6
RFX4-207ENST00000546882 NBPF9Q3BBW0 867 aa11.29□□□□□ -0.6
RFX4-207ENST00000546882 HSP90AB3PQ58FF7 597 aa11.29□□□□□ -0.6
RFX4-207ENST00000546882 LDLRAD1Q5T700 205 aa11.29□□□□□ -0.6
RFX4-207ENST00000546882 SLC17A8Q8NDX2 589 aa11.29□□□□□ -0.6
RFX4-207ENST00000546882 ZC3H12CQ9C0D7 883 aaKnown RBP11.29□□□□□ -0.6
RFX4-207ENST00000546882 PODXL2Q9NZ53 605 aa11.29□□□□□ -0.6
RFX4-207ENST00000546882 IGF2BP3O00425 579 aaKnown RBP eCLIP11.28□□□□□ -0.6
RFX4-207ENST00000546882 TTLL12Q14166 644 aaPredicted RBP11.28□□□□□ -0.6
RFX4-207ENST00000546882 COPS6Q7L5N1 327 aa11.28□□□□□ -0.6
RFX4-207ENST00000546882 SPNS2Q8IVW8 549 aa11.28□□□□□ -0.6
RFX4-207ENST00000546882 ZNF428Q96B54 188 aa11.28□□□□□ -0.6
RFX4-207ENST00000546882 CFAP53Q96M91 514 aa11.28□□□□□ -0.6
RFX4-207ENST00000546882 NUDCQ9Y266 331 aa11.28□□□□□ -0.6
RFX4-207ENST00000546882 LAMA3Q16787 3333 aa11.28□□□□□ -0.6
RFX4-207ENST00000546882 RPS8P62241 208 aaKnown RBP11.27□□□□□ -0.61
RFX4-207ENST00000546882 CD99L2Q8TCZ2 262 aa11.27□□□□□ -0.61
RFX4-207ENST00000546882 XAGE3Q8WTP9 111 aa11.27□□□□□ -0.61
RFX4-207ENST00000546882 ZNF333Q96JL9 665 aa11.27□□□□□ -0.61
RFX4-207ENST00000546882 ZNF646O15015 1829 aaPredicted RBP11.27□□□□□ -0.61
RFX4-207ENST00000546882 MANSC4A6NHS7 340 aaPredicted RBP11.26□□□□□ -0.61
RFX4-207ENST00000546882 WNT10BO00744 389 aa11.26□□□□□ -0.61
RFX4-207ENST00000546882 EIF2S2P20042 333 aaKnown RBP11.26□□□□□ -0.61
RFX4-207ENST00000546882 INHBEP58166 350 aa11.26□□□□□ -0.61
RFX4-207ENST00000546882 FAM89AQ96GI7 184 aa11.26□□□□□ -0.61
RFX4-207ENST00000546882 ERO1AQ96HE7 468 aa11.26□□□□□ -0.61
RFX4-207ENST00000546882 EFCC1Q9HA90 598 aa11.26□□□□□ -0.61
RFX4-207ENST00000546882 RBM27Q9P2N5 1060 aaKnown RBP11.26□□□□□ -0.61
RFX4-207ENST00000546882 ARIH1Q9Y4X5 557 aaPredicted RBP11.26□□□□□ -0.61
RFX4-207ENST00000546882 UFL1O94874 794 aa11.25□□□□□ -0.61
RFX4-207ENST00000546882 NF2P35240 595 aa11.25□□□□□ -0.61
RFX4-207ENST00000546882 LSM11P83369 360 aaKnown RBP eCLIP11.25□□□□□ -0.61
RFX4-207ENST00000546882 AIMP1Q12904 312 aaKnown RBP11.25□□□□□ -0.61
RFX4-207ENST00000546882 PRKG1Q13976 671 aa11.25□□□□□ -0.61
RFX4-207ENST00000546882 PRO3102Q9H379 93 aa11.25□□□□□ -0.61
RFX4-207ENST00000546882 FZD1Q9UP38 647 aa11.25□□□□□ -0.61
RFX4-207ENST00000546882 USP17L3A6NCW0 530 aa11.24□□□□□ -0.61
RFX4-207ENST00000546882 USP17L4A6NCW7 530 aa11.24□□□□□ -0.61
RFX4-207ENST00000546882 ARHGAP33O14559 1287 aa11.24□□□□□ -0.61
RFX4-207ENST00000546882 PSEN2P49810 448 aa11.24□□□□□ -0.61
RFX4-207ENST00000546882 CRHR2Q13324 411 aa11.24□□□□□ -0.61
RFX4-207ENST00000546882 USP17L1Q7RTZ2 530 aa11.24□□□□□ -0.61
RFX4-207ENST00000546882 ARMC9Q7Z3E5 817 aa11.24□□□□□ -0.61
RFX4-207ENST00000546882 KCNV2Q8TDN2 545 aa11.24□□□□□ -0.61
RFX4-207ENST00000546882 ISCA1Q9BUE6 129 aa11.24□□□□□ -0.61
RFX4-207ENST00000546882 SEC31BQ9NQW1 1179 aa11.24□□□□□ -0.61
RFX4-207ENST00000546882 ANGEL1Q9UNK9 670 aaKnown RBP11.24□□□□□ -0.61
RFX4-207ENST00000546882 PCDHGA10Q9Y5H3 936 aa11.24□□□□□ -0.61
RFX4-207ENST00000546882 WTIPA6NIX2 430 aaPredicted RBP11.23□□□□□ -0.61
RFX4-207ENST00000546882 ZBTB48P10074 688 aaPredicted RBP11.23□□□□□ -0.61
RFX4-207ENST00000546882 MAP3K11Q16584 847 aa11.23□□□□□ -0.61
RFX4-207ENST00000546882 DACT2Q5SW24 774 aa11.23□□□□□ -0.61
RFX4-207ENST00000546882 ANKRD13DQ6ZTN6 518 aa11.23□□□□□ -0.61
RFX4-207ENST00000546882 PODNQ7Z5L7 613 aa11.23□□□□□ -0.61
RFX4-207ENST00000546882 CLMNQ96JQ2 1002 aa11.23□□□□□ -0.61
RFX4-207ENST00000546882 PLEKHF1Q96S99 279 aa11.23□□□□□ -0.61
RFX4-207ENST00000546882 KCNK17Q96T54 332 aa11.23□□□□□ -0.61
RFX4-207ENST00000546882 PTPN18Q99952 460 aa11.23□□□□□ -0.61
RFX4-207ENST00000546882 MXD3Q9BW11 206 aa11.23□□□□□ -0.61
RFX4-207ENST00000546882 ANKIB1Q9P2G1 1089 aa11.23□□□□□ -0.61
RFX4-207ENST00000546882 GGA1Q9UJY5 639 aa11.23□□□□□ -0.61
RFX4-207ENST00000546882 CLSPNQ9HAW4 1339 aa11.23□□□□□ -0.61
RFX4-207ENST00000546882 PPP2R1AP30153 589 aa11.22□□□□□ -0.61
RFX4-207ENST00000546882 SP3Q02447 781 aa11.22□□□□□ -0.61
RFX4-207ENST00000546882 RTL5Q5HYW3 569 aaPredicted RBP11.22□□□□□ -0.61
RFX4-207ENST00000546882 ZDHHC16Q969W1 377 aa11.22□□□□□ -0.61
RFX4-207ENST00000546882 SLC10A4Q96EP9 437 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms