RNA–Protein interactions for RNA: ENST00000546881.1

RAB5C-203, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 608 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-203ENST00000546881 CNNM1Q9NRU3 951 aa14.56□□□□□ -0.08
RAB5C-203ENST00000546881 CLRN2A0PK11 232 aa14.55□□□□□ -0.08
RAB5C-203ENST00000546881 TM4SF4P48230 202 aa14.55□□□□□ -0.08
RAB5C-203ENST00000546881 RBM5P52756 815 aaKnown RBP eCLIP14.55□□□□□ -0.08
RAB5C-203ENST00000546881 SLC4A10Q6U841 1118 aa14.55□□□□□ -0.08
RAB5C-203ENST00000546881 LDHAL6AQ6ZMR3 332 aa14.55□□□□□ -0.08
RAB5C-203ENST00000546881 ZBED3Q96IU2 234 aaPredicted RBP14.55□□□□□ -0.08
RAB5C-203ENST00000546881 DEFB129Q9H1M3 183 aa14.55□□□□□ -0.08
RAB5C-203ENST00000546881 VEZTQ9HBM0 779 aa14.55□□□□□ -0.08
RAB5C-203ENST00000546881 C9orf78Q9NZ63 289 aaPredicted RBP14.55□□□□□ -0.08
RAB5C-203ENST00000546881 HPS5Q9UPZ3 1129 aa14.55□□□□□ -0.08
RAB5C-203ENST00000546881 PCDHAC2Q9Y5I4 1007 aa14.55□□□□□ -0.08
RAB5C-203ENST00000546881 GPR25O00155 361 aa14.54□□□□□ -0.08
RAB5C-203ENST00000546881 GRM8O00222 908 aa14.54□□□□□ -0.08
RAB5C-203ENST00000546881 MYO1BO43795 1136 aa14.54□□□□□ -0.08
RAB5C-203ENST00000546881 CFAP100Q494V2 611 aa14.54□□□□□ -0.08
RAB5C-203ENST00000546881 EPHA10Q5JZY3 1008 aa14.54□□□□□ -0.08
RAB5C-203ENST00000546881 SPINK5Q9NQ38 1064 aaPredicted RBP14.54□□□□□ -0.08
RAB5C-203ENST00000546881 IRS2Q9Y4H2 1338 aa14.54□□□□□ -0.08
RAB5C-203ENST00000546881 A0A1B0GUL6 1792 aa14.54□□□□□ -0.08
RAB5C-203ENST00000546881 CACNA1FO60840 1977 aa14.54□□□□□ -0.08
RAB5C-203ENST00000546881 COL1A1P02452 1464 aaPredicted RBP14.53□□□□□ -0.08
RAB5C-203ENST00000546881 IL1R1P14778 569 aa14.53□□□□□ -0.08
RAB5C-203ENST00000546881 SPRYD7Q5W111 196 aa14.53□□□□□ -0.08
RAB5C-203ENST00000546881 C15orf52Q6ZUT6 534 aaKnown RBP14.53□□□□□ -0.08
RAB5C-203ENST00000546881 FAM9BQ8IZU0 186 aa14.53□□□□□ -0.08
RAB5C-203ENST00000546881 SLC10A4Q96EP9 437 aa14.53□□□□□ -0.08
RAB5C-203ENST00000546881 PPP1R12BO60237 982 aaPredicted RBP14.52□□□□□ -0.09
RAB5C-203ENST00000546881 PKN2Q16513 984 aaKnown RBP14.52□□□□□ -0.09
RAB5C-203ENST00000546881 LDLRAD1Q5T700 205 aa14.52□□□□□ -0.09
RAB5C-203ENST00000546881 MTMR14Q8NCE2 650 aa14.52□□□□□ -0.09
RAB5C-203ENST00000546881 PRMT6Q96LA8 375 aaPredicted RBP14.52□□□□□ -0.09
RAB5C-203ENST00000546881 SPDYE2BA6NHP3 402 aa14.51□□□□□ -0.09
RAB5C-203ENST00000546881 FKTNO75072 461 aa14.51□□□□□ -0.09
RAB5C-203ENST00000546881 SLC34A2O95436 690 aa14.51□□□□□ -0.09
RAB5C-203ENST00000546881 SPDYE6P0CI01 402 aa14.51□□□□□ -0.09
RAB5C-203ENST00000546881 SUPT20HL1Q3ZLR7 823 aa14.51□□□□□ -0.09
RAB5C-203ENST00000546881 CLMNQ96JQ2 1002 aa14.51□□□□□ -0.09
RAB5C-203ENST00000546881 SRCIN1Q9C0H9 1055 aa14.51□□□□□ -0.09
RAB5C-203ENST00000546881 R3HDMLQ9H3Y0 253 aa14.51□□□□□ -0.09
RAB5C-203ENST00000546881 PPP2R3BQ9Y5P8 575 aa14.51□□□□□ -0.09
RAB5C-203ENST00000546881 AOX1Q06278 1338 aa14.5□□□□□ -0.09
RAB5C-203ENST00000546881 MANSC4A6NHS7 340 aaPredicted RBP14.5□□□□□ -0.09
RAB5C-203ENST00000546881 ALDH1L1O75891 902 aa14.5□□□□□ -0.09
RAB5C-203ENST00000546881 GYG1P46976 350 aa14.5□□□□□ -0.09
RAB5C-203ENST00000546881 NBPF12Q5TAG4 269 aaPredicted RBP14.5□□□□□ -0.09
RAB5C-203ENST00000546881 SSC5DA1L4H1 1573 aa14.5□□□□□ -0.09
RAB5C-203ENST00000546881 ECM29Q5VYK3 1845 aa14.5□□□□□ -0.09
RAB5C-203ENST00000546881 ALDH1A1P00352 501 aa14.49□□□□□ -0.09
RAB5C-203ENST00000546881 IREB2P48200 963 aaKnown RBP14.49□□□□□ -0.09
RAB5C-203ENST00000546881 FKBP1AP62942 108 aaKnown RBP14.49□□□□□ -0.09
RAB5C-203ENST00000546881 MFSD14BQ5SR56 506 aa14.49□□□□□ -0.09
RAB5C-203ENST00000546881 SUCLG2Q96I99 432 aa14.49□□□□□ -0.09
RAB5C-203ENST00000546881 WNK4Q96J92 1243 aa14.49□□□□□ -0.09
RAB5C-203ENST00000546881 PUS3Q9BZE2 481 aaKnown RBP14.49□□□□□ -0.09
RAB5C-203ENST00000546881 TTF2Q9UNY4 1162 aaKnown RBP14.49□□□□□ -0.09
RAB5C-203ENST00000546881 HIBADHP31937 336 aaKnown RBP14.48□□□□□ -0.09
RAB5C-203ENST00000546881 RASA3Q14644 834 aa14.48□□□□□ -0.09
RAB5C-203ENST00000546881 MAP3K11Q16584 847 aa14.48□□□□□ -0.09
RAB5C-203ENST00000546881 NOM1Q5C9Z4 860 aaKnown RBP14.48□□□□□ -0.09
RAB5C-203ENST00000546881 FBXO46Q6PJ61 603 aaPredicted RBP14.48□□□□□ -0.09
RAB5C-203ENST00000546881 IFNL1Q8IU54 200 aa14.48□□□□□ -0.09
RAB5C-203ENST00000546881 FAM205AQ6ZU69 1335 aa14.47□□□□□ -0.09
RAB5C-203ENST00000546881 ZBTB48P10074 688 aaPredicted RBP14.47□□□□□ -0.09
RAB5C-203ENST00000546881 INHBEP58166 350 aa14.47□□□□□ -0.09
RAB5C-203ENST00000546881 UBE4AQ14139 1066 aa14.47□□□□□ -0.09
RAB5C-203ENST00000546881 VPS37DQ86XT2 251 aa14.47□□□□□ -0.09
RAB5C-203ENST00000546881 TDRD7Q8NHU6 1098 aaKnown RBP14.47□□□□□ -0.09
RAB5C-203ENST00000546881 CFHR5Q9BXR6 569 aa14.47□□□□□ -0.09
RAB5C-203ENST00000546881 TDRD3Q9H7E2 651 aaKnown RBP14.47□□□□□ -0.09
RAB5C-203ENST00000546881 ZNF70Q9UC06 446 aaPredicted RBP14.47□□□□□ -0.09
RAB5C-203ENST00000546881 IQSEC3Q9UPP2 1182 aaPredicted RBP14.47□□□□□ -0.09
RAB5C-203ENST00000546881 TCP10L2B9ZVM9 353 aa14.46□□□□□ -0.09
RAB5C-203ENST00000546881 IGF2BP3O00425 579 aaKnown RBP eCLIP14.46□□□□□ -0.09
RAB5C-203ENST00000546881 FRAT2O75474 233 aaPredicted RBP14.46□□□□□ -0.09
RAB5C-203ENST00000546881 USP2O75604 605 aaPredicted RBP14.46□□□□□ -0.09
RAB5C-203ENST00000546881 NBPF7P0C2Y1 421 aaPredicted RBP14.46□□□□□ -0.09
RAB5C-203ENST00000546881 CHAF1AQ13111 956 aaPredicted RBP14.46□□□□□ -0.09
RAB5C-203ENST00000546881 TNFAIP1Q13829 316 aa14.46□□□□□ -0.09
RAB5C-203ENST00000546881 ANKRD13AQ8IZ07 590 aa14.46□□□□□ -0.09
RAB5C-203ENST00000546881 FAM84BQ96KN1 310 aaPredicted RBP14.46□□□□□ -0.09
RAB5C-203ENST00000546881 ELP3Q9H9T3 547 aa14.46□□□□□ -0.09
RAB5C-203ENST00000546881 TRIM17Q9Y577 477 aa14.46□□□□□ -0.09
RAB5C-203ENST00000546881 SPDYE2Q495Y8 402 aa14.45□□□□□ -0.1
RAB5C-203ENST00000546881 METTL24Q5JXM2 366 aa14.45□□□□□ -0.1
RAB5C-203ENST00000546881 KAZALD1Q96I82 304 aa14.45□□□□□ -0.1
RAB5C-203ENST00000546881 BICC1Q9H694 974 aaKnown RBP14.45□□□□□ -0.1
RAB5C-203ENST00000546881 SERPINA10Q9UK55 444 aa14.45□□□□□ -0.1
RAB5C-203ENST00000546881 MROH5Q6ZUA9 1318 aa14.44□□□□□ -0.1
RAB5C-203ENST00000546881 GJA5P36382 358 aa14.44□□□□□ -0.1
RAB5C-203ENST00000546881 CRKP46108 304 aa14.44□□□□□ -0.1
RAB5C-203ENST00000546881 OTUD7BQ6GQQ9 843 aa14.44□□□□□ -0.1
RAB5C-203ENST00000546881 DZIP1LQ8IYY4 767 aaKnown RBP14.44□□□□□ -0.1
RAB5C-203ENST00000546881 TNRC18O15417 2968 aaPredicted RBP14.44□□□□□ -0.1
RAB5C-203ENST00000546881 UNCXA6NJT0 531 aa14.43□□□□□ -0.1
RAB5C-203ENST00000546881 TNNI2P48788 182 aa14.43□□□□□ -0.1
RAB5C-203ENST00000546881 CRHR2Q13324 411 aa14.43□□□□□ -0.1
RAB5C-203ENST00000546881 LRRC24Q50LG9 513 aa14.43□□□□□ -0.1
RAB5C-203ENST00000546881 CAVIN4Q5BKX8 364 aa14.43□□□□□ -0.1
RAB5C-203ENST00000546881 CDAN1Q8IWY9 1227 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms