RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 PSME4Q14997 1843 aa17.84■□□□□ 0.45
DDX54-203ENST00000546869 PDS5AQ29RF7 1337 aaKnown RBP17.83■□□□□ 0.44
DDX54-203ENST00000546869 USP17L8P0C7I0 530 aa17.83■□□□□ 0.44
DDX54-203ENST00000546869 CCDC102BQ68D86 513 aa17.83■□□□□ 0.44
DDX54-203ENST00000546869 MICALL2Q8IY33 904 aa17.83■□□□□ 0.44
DDX54-203ENST00000546869 TBC1D22AQ8WUA7 517 aa17.83■□□□□ 0.44
DDX54-203ENST00000546869 NEUROD6Q96NK8 337 aa17.83■□□□□ 0.44
DDX54-203ENST00000546869 ADORA1P30542 326 aa17.82■□□□□ 0.44
DDX54-203ENST00000546869 ZC3H15Q8WU90 426 aaKnown RBP17.82■□□□□ 0.44
DDX54-203ENST00000546869 PGAP2Q9UHJ9 254 aa17.82■□□□□ 0.44
DDX54-203ENST00000546869 FRAT2O75474 233 aaPredicted RBP17.81■□□□□ 0.44
DDX54-203ENST00000546869 FSTL1Q12841 308 aa17.81■□□□□ 0.44
DDX54-203ENST00000546869 HDAC1Q13547 482 aaPredicted RBP17.81■□□□□ 0.44
DDX54-203ENST00000546869 LDHDQ86WU2 507 aa17.81■□□□□ 0.44
DDX54-203ENST00000546869 OGFOD1Q8N543 542 aa17.81■□□□□ 0.44
DDX54-203ENST00000546869 CERS5Q8N5B7 392 aa17.81■□□□□ 0.44
DDX54-203ENST00000546869 EXOC6Q8TAG9 804 aa17.81■□□□□ 0.44
DDX54-203ENST00000546869 WDR66Q8TBY9 1149 aa17.81■□□□□ 0.44
DDX54-203ENST00000546869 EAF2Q96CJ1 260 aaPredicted RBP17.81■□□□□ 0.44
DDX54-203ENST00000546869 ZNF512BQ96KM6 892 aaPredicted RBP17.81■□□□□ 0.44
DDX54-203ENST00000546869 DENND2AQ9ULE3 1009 aa17.81■□□□□ 0.44
DDX54-203ENST00000546869 SUGT1Q9Y2Z0 365 aa17.81■□□□□ 0.44
DDX54-203ENST00000546869 PHKA1P46020 1223 aa17.8■□□□□ 0.44
DDX54-203ENST00000546869 MFSD14BQ5SR56 506 aa17.8■□□□□ 0.44
DDX54-203ENST00000546869 CLASRPQ8N2M8 674 aaKnown RBP17.8■□□□□ 0.44
DDX54-203ENST00000546869 SMC1BQ8NDV3 1235 aa17.8■□□□□ 0.44
DDX54-203ENST00000546869 FBXW7Q969H0 707 aa17.8■□□□□ 0.44
DDX54-203ENST00000546869 MXD3Q9BW11 206 aa17.8■□□□□ 0.44
DDX54-203ENST00000546869 MRIQ9BWK5 157 aa17.8■□□□□ 0.44
DDX54-203ENST00000546869 SALL1Q9NSC2 1324 aa17.79■□□□□ 0.44
DDX54-203ENST00000546869 UQCRFS1P1P0C7P4 283 aa17.79■□□□□ 0.44
DDX54-203ENST00000546869 ARID4AP29374 1257 aaPredicted RBP17.79■□□□□ 0.44
DDX54-203ENST00000546869 HIRAP54198 1017 aaPredicted RBP17.79■□□□□ 0.44
DDX54-203ENST00000546869 CCDC158Q5M9N0 1113 aa17.79■□□□□ 0.44
DDX54-203ENST00000546869 GORABQ5T7V8 394 aa17.79■□□□□ 0.44
DDX54-203ENST00000546869 CHADLQ6NUI6 762 aa17.79■□□□□ 0.44
DDX54-203ENST00000546869 HDAC9Q9UKV0 1011 aa17.79■□□□□ 0.44
DDX54-203ENST00000546869 IQSEC3Q9UPP2 1182 aaPredicted RBP17.79■□□□□ 0.44
DDX54-203ENST00000546869 ZNF646O15015 1829 aaPredicted RBP17.79■□□□□ 0.44
DDX54-203ENST00000546869 ARAP2Q8WZ64 1704 aa17.78■□□□□ 0.44
DDX54-203ENST00000546869 SHTN1A0MZ66 631 aa17.78■□□□□ 0.44
DDX54-203ENST00000546869 MTMR14Q8NCE2 650 aa17.78■□□□□ 0.44
DDX54-203ENST00000546869 DBNDD2Q9BQY9 259 aa17.78■□□□□ 0.44
DDX54-203ENST00000546869 LRRCC1Q9C099 1032 aa17.78■□□□□ 0.44
DDX54-203ENST00000546869 MYOZ2Q9NPC6 264 aa17.78■□□□□ 0.44
DDX54-203ENST00000546869 ADAMTSL1Q8N6G6 1762 aa17.77■□□□□ 0.44
DDX54-203ENST00000546869 IGSF3O75054 1194 aa17.77■□□□□ 0.44
DDX54-203ENST00000546869 POTEIP0CG38 1075 aa17.77■□□□□ 0.44
DDX54-203ENST00000546869 POTEJP0CG39 1038 aa17.77■□□□□ 0.44
DDX54-203ENST00000546869 C1QTNF8P60827 252 aa17.77■□□□□ 0.44
DDX54-203ENST00000546869 HDLBPQ00341 1268 aaKnown RBP17.77■□□□□ 0.44
DDX54-203ENST00000546869 EAPPQ56P03 285 aaPredicted RBP17.77■□□□□ 0.44
DDX54-203ENST00000546869 SAMD7Q7Z3H4 446 aa17.77■□□□□ 0.44
DDX54-203ENST00000546869 KIAA0825Q8IV33 1275 aa17.77■□□□□ 0.44
DDX54-203ENST00000546869 ZBED3Q96IU2 234 aaPredicted RBP17.77■□□□□ 0.44
DDX54-203ENST00000546869 DBNLQ9UJU6 430 aaKnown RBP17.77■□□□□ 0.44
DDX54-203ENST00000546869 CHAF1AQ13111 956 aaPredicted RBP17.76■□□□□ 0.43
DDX54-203ENST00000546869 RASGRF1Q13972 1273 aa17.76■□□□□ 0.43
DDX54-203ENST00000546869 KIF4BQ2VIQ3 1234 aa17.76■□□□□ 0.43
DDX54-203ENST00000546869 AACSQ86V21 672 aa17.76■□□□□ 0.43
DDX54-203ENST00000546869 ZGPATQ8N5A5 531 aaKnown RBP17.76■□□□□ 0.43
DDX54-203ENST00000546869 TRPM4Q8TD43 1214 aa17.76■□□□□ 0.43
DDX54-203ENST00000546869 GCC1Q96CN9 775 aa17.76■□□□□ 0.43
DDX54-203ENST00000546869 CCDC8Q9H0W5 538 aaPredicted RBP17.76■□□□□ 0.43
DDX54-203ENST00000546869 RWDD1Q9H446 243 aaPredicted RBP17.76■□□□□ 0.43
DDX54-203ENST00000546869 IL1RAPL2Q9NP60 686 aa17.76■□□□□ 0.43
DDX54-203ENST00000546869 SERPINA10Q9UK55 444 aa17.76■□□□□ 0.43
DDX54-203ENST00000546869 TBC1D10BQ4KMP7 808 aaPredicted RBP17.75■□□□□ 0.43
DDX54-203ENST00000546869 SPATA5Q8NB90 893 aa17.75■□□□□ 0.43
DDX54-203ENST00000546869 HMG20BQ9P0W2 317 aa17.75■□□□□ 0.43
DDX54-203ENST00000546869 JAG2Q9Y219 1238 aa17.75■□□□□ 0.43
DDX54-203ENST00000546869 CLEC11AQ9Y240 323 aa17.75■□□□□ 0.43
DDX54-203ENST00000546869 MAST3O60307 1309 aa17.74■□□□□ 0.43
DDX54-203ENST00000546869 EGFRP00533 1210 aa17.74■□□□□ 0.43
DDX54-203ENST00000546869 TTC39AQ5SRH9 613 aa17.74■□□□□ 0.43
DDX54-203ENST00000546869 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.74■□□□□ 0.43
DDX54-203ENST00000546869 TLR7Q9NYK1 1049 aaKnown RBP17.74■□□□□ 0.43
DDX54-203ENST00000546869 COL1A1P02452 1464 aaPredicted RBP17.74■□□□□ 0.43
DDX54-203ENST00000546869 APBB1O00213 710 aa17.73■□□□□ 0.43
DDX54-203ENST00000546869 ITGBL1O95965 494 aaPredicted RBP17.73■□□□□ 0.43
DDX54-203ENST00000546869 CENPBP07199 599 aaPredicted RBP17.73■□□□□ 0.43
DDX54-203ENST00000546869 IFIT2P09913 472 aaKnown RBP17.73■□□□□ 0.43
DDX54-203ENST00000546869 MCAMP43121 646 aa17.73■□□□□ 0.43
DDX54-203ENST00000546869 SCARF1Q14162 830 aa17.73■□□□□ 0.43
DDX54-203ENST00000546869 RBM26Q5T8P6 1007 aaKnown RBP17.73■□□□□ 0.43
DDX54-203ENST00000546869 SPTY2D1Q68D10 685 aaPredicted RBP17.73■□□□□ 0.43
DDX54-203ENST00000546869 CNTROBQ8N137 903 aa17.73■□□□□ 0.43
DDX54-203ENST00000546869 TTF2Q9UNY4 1162 aaKnown RBP17.73■□□□□ 0.43
DDX54-203ENST00000546869 PITPNM2Q9BZ72 1349 aa17.72■□□□□ 0.43
DDX54-203ENST00000546869 WNT10BO00744 389 aa17.72■□□□□ 0.43
DDX54-203ENST00000546869 DLGAP5Q15398 846 aa17.72■□□□□ 0.43
DDX54-203ENST00000546869 GRIK5Q16478 980 aa17.72■□□□□ 0.43
DDX54-203ENST00000546869 HHIPL2Q6UWX4 724 aa17.72■□□□□ 0.43
DDX54-203ENST00000546869 F8W031 263 aaPredicted RBP17.71■□□□□ 0.43
DDX54-203ENST00000546869 LDHBP07195 334 aaKnown RBP17.71■□□□□ 0.43
DDX54-203ENST00000546869 MAP1SQ66K74 1059 aaPredicted RBP17.71■□□□□ 0.43
DDX54-203ENST00000546869 CDC37L1Q7L3B6 337 aa17.71■□□□□ 0.43
DDX54-203ENST00000546869 SMC5Q8IY18 1101 aa17.71■□□□□ 0.43
DDX54-203ENST00000546869 PASKQ96RG2 1323 aa17.71■□□□□ 0.42
DDX54-203ENST00000546869 SPDYE2BA6NHP3 402 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms