RNA–Protein interactions for RNA: ENST00000546803.5

CCDC38-203, Transcript of coiled-coil domain containing 38, humanhuman

TSL 4

Gene CCDC38, Length 511 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-203ENST00000546803 USP17L8P0C7I0 530 aa20.7■□□□□ 0.9
CCDC38-203ENST00000546803 ADORA1P30542 326 aa20.7■□□□□ 0.9
CCDC38-203ENST00000546803 CCDC102BQ68D86 513 aa20.7■□□□□ 0.9
CCDC38-203ENST00000546803 PHKA1P46020 1223 aa20.69■□□□□ 0.9
CCDC38-203ENST00000546803 ZNF280AP59817 542 aaPredicted RBP20.69■□□□□ 0.9
CCDC38-203ENST00000546803 GORABQ5T7V8 394 aa20.69■□□□□ 0.9
CCDC38-203ENST00000546803 OGFOD1Q8N543 542 aa20.69■□□□□ 0.9
CCDC38-203ENST00000546803 EXOC6Q8TAG9 804 aa20.69■□□□□ 0.9
CCDC38-203ENST00000546803 TBC1D22AQ8WUA7 517 aa20.69■□□□□ 0.9
CCDC38-203ENST00000546803 MXD3Q9BW11 206 aa20.69■□□□□ 0.9
CCDC38-203ENST00000546803 IQSEC3Q9UPP2 1182 aaPredicted RBP20.69■□□□□ 0.9
CCDC38-203ENST00000546803 EAPPQ56P03 285 aaPredicted RBP20.68■□□□□ 0.9
CCDC38-203ENST00000546803 LDHDQ86WU2 507 aa20.68■□□□□ 0.9
CCDC38-203ENST00000546803 DCTPP1Q9H773 170 aa20.68■□□□□ 0.9
CCDC38-203ENST00000546803 HDAC9Q9UKV0 1011 aa20.68■□□□□ 0.9
CCDC38-203ENST00000546803 DENND2AQ9ULE3 1009 aa20.68■□□□□ 0.9
CCDC38-203ENST00000546803 CHAF1AQ13111 956 aaPredicted RBP20.67■□□□□ 0.9
CCDC38-203ENST00000546803 MFSD14BQ5SR56 506 aa20.67■□□□□ 0.9
CCDC38-203ENST00000546803 CLASRPQ8N2M8 674 aaKnown RBP20.67■□□□□ 0.9
CCDC38-203ENST00000546803 CERS5Q8N5B7 392 aa20.67■□□□□ 0.9
CCDC38-203ENST00000546803 SMC1BQ8NDV3 1235 aa20.67■□□□□ 0.9
CCDC38-203ENST00000546803 WDR66Q8TBY9 1149 aa20.67■□□□□ 0.9
CCDC38-203ENST00000546803 SHTN1A0MZ66 631 aa20.66■□□□□ 0.9
CCDC38-203ENST00000546803 FSTL1Q12841 308 aa20.66■□□□□ 0.9
CCDC38-203ENST00000546803 EAF2Q96CJ1 260 aaPredicted RBP20.66■□□□□ 0.9
CCDC38-203ENST00000546803 JAG2Q9Y219 1238 aa20.66■□□□□ 0.9
CCDC38-203ENST00000546803 SCN9AQ15858 1988 aa20.65■□□□□ 0.9
CCDC38-203ENST00000546803 SCN4AP35499 1836 aa20.65■□□□□ 0.9
CCDC38-203ENST00000546803 PDS5AQ29RF7 1337 aaKnown RBP20.65■□□□□ 0.9
CCDC38-203ENST00000546803 APBB1O00213 710 aa20.65■□□□□ 0.9
CCDC38-203ENST00000546803 UQCRFS1P1P0C7P4 283 aa20.65■□□□□ 0.9
CCDC38-203ENST00000546803 HDAC1Q13547 482 aaPredicted RBP20.65■□□□□ 0.9
CCDC38-203ENST00000546803 CCDC158Q5M9N0 1113 aa20.65■□□□□ 0.9
CCDC38-203ENST00000546803 SAMD7Q7Z3H4 446 aa20.65■□□□□ 0.9
CCDC38-203ENST00000546803 KIAA0825Q8IV33 1275 aa20.65■□□□□ 0.9
CCDC38-203ENST00000546803 ZC3H15Q8WU90 426 aaKnown RBP20.65■□□□□ 0.9
CCDC38-203ENST00000546803 DBNDD2Q9BQY9 259 aa20.65■□□□□ 0.9
CCDC38-203ENST00000546803 LRRCC1Q9C099 1032 aa20.65■□□□□ 0.9
CCDC38-203ENST00000546803 CLEC11AQ9Y240 323 aa20.65■□□□□ 0.9
CCDC38-203ENST00000546803 SUGT1Q9Y2Z0 365 aa20.65■□□□□ 0.9
CCDC38-203ENST00000546803 CHADLQ6NUI6 762 aa20.64■□□□□ 0.89
CCDC38-203ENST00000546803 AACSQ86V21 672 aa20.64■□□□□ 0.89
CCDC38-203ENST00000546803 TRPM4Q8TD43 1214 aa20.64■□□□□ 0.89
CCDC38-203ENST00000546803 IL1RAPL2Q9NP60 686 aa20.64■□□□□ 0.89
CCDC38-203ENST00000546803 MYOZ2Q9NPC6 264 aa20.64■□□□□ 0.89
CCDC38-203ENST00000546803 DBNLQ9UJU6 430 aaKnown RBP20.64■□□□□ 0.89
CCDC38-203ENST00000546803 POTEIP0CG38 1075 aa20.63■□□□□ 0.89
CCDC38-203ENST00000546803 POTEJP0CG39 1038 aa20.63■□□□□ 0.89
CCDC38-203ENST00000546803 ARID4AP29374 1257 aaPredicted RBP20.63■□□□□ 0.89
CCDC38-203ENST00000546803 KIF4BQ2VIQ3 1234 aa20.63■□□□□ 0.89
CCDC38-203ENST00000546803 TBC1D10BQ4KMP7 808 aaPredicted RBP20.63■□□□□ 0.89
CCDC38-203ENST00000546803 ZNF512BQ96KM6 892 aaPredicted RBP20.63■□□□□ 0.89
CCDC38-203ENST00000546803 CCDC8Q9H0W5 538 aaPredicted RBP20.63■□□□□ 0.89
CCDC38-203ENST00000546803 CENPBP07199 599 aaPredicted RBP20.62■□□□□ 0.89
CCDC38-203ENST00000546803 IFIT2P09913 472 aaKnown RBP20.62■□□□□ 0.89
CCDC38-203ENST00000546803 HIRAP54198 1017 aaPredicted RBP20.62■□□□□ 0.89
CCDC38-203ENST00000546803 C1QTNF8P60827 252 aa20.62■□□□□ 0.89
CCDC38-203ENST00000546803 RASGRF1Q13972 1273 aa20.62■□□□□ 0.89
CCDC38-203ENST00000546803 TTC39AQ5SRH9 613 aa20.62■□□□□ 0.89
CCDC38-203ENST00000546803 RBM26Q5T8P6 1007 aaKnown RBP20.62■□□□□ 0.89
CCDC38-203ENST00000546803 ZGPATQ8N5A5 531 aaKnown RBP20.62■□□□□ 0.89
CCDC38-203ENST00000546803 PGAP2Q9UHJ9 254 aa20.62■□□□□ 0.89
CCDC38-203ENST00000546803 SALL1Q9NSC2 1324 aa20.61■□□□□ 0.89
CCDC38-203ENST00000546803 F8W031 263 aaPredicted RBP20.61■□□□□ 0.89
CCDC38-203ENST00000546803 IRX6P78412 446 aaPredicted RBP20.61■□□□□ 0.89
CCDC38-203ENST00000546803 RWDD1Q9H446 243 aaPredicted RBP20.61■□□□□ 0.89
CCDC38-203ENST00000546803 TTF2Q9UNY4 1162 aaKnown RBP20.61■□□□□ 0.89
CCDC38-203ENST00000546803 EGFRP00533 1210 aa20.6■□□□□ 0.89
CCDC38-203ENST00000546803 HDLBPQ00341 1268 aaKnown RBP20.6■□□□□ 0.89
CCDC38-203ENST00000546803 SPATA5Q8NB90 893 aa20.6■□□□□ 0.89
CCDC38-203ENST00000546803 MTMR14Q8NCE2 650 aa20.6■□□□□ 0.89
CCDC38-203ENST00000546803 GCC1Q96CN9 775 aa20.6■□□□□ 0.89
CCDC38-203ENST00000546803 TLR7Q9NYK1 1049 aaKnown RBP20.6■□□□□ 0.89
CCDC38-203ENST00000546803 HMG20BQ9P0W2 317 aa20.6■□□□□ 0.89
CCDC38-203ENST00000546803 MAST3O60307 1309 aa20.59■□□□□ 0.89
CCDC38-203ENST00000546803 COL1A1P02452 1464 aaPredicted RBP20.59■□□□□ 0.89
CCDC38-203ENST00000546803 MRIQ9BWK5 157 aa20.59■□□□□ 0.89
CCDC38-203ENST00000546803 SERPINA10Q9UK55 444 aa20.59■□□□□ 0.89
CCDC38-203ENST00000546803 PSME4Q14997 1843 aa20.58■□□□□ 0.89
CCDC38-203ENST00000546803 MCAMP43121 646 aa20.58■□□□□ 0.89
CCDC38-203ENST00000546803 SCARF1Q14162 830 aa20.58■□□□□ 0.89
CCDC38-203ENST00000546803 DLGAP5Q15398 846 aa20.58■□□□□ 0.89
CCDC38-203ENST00000546803 MAP1SQ66K74 1059 aaPredicted RBP20.58■□□□□ 0.89
CCDC38-203ENST00000546803 SPTY2D1Q68D10 685 aaPredicted RBP20.58■□□□□ 0.89
CCDC38-203ENST00000546803 CNTROBQ8N137 903 aa20.58■□□□□ 0.89
CCDC38-203ENST00000546803 WNT10BO00744 389 aa20.57■□□□□ 0.88
CCDC38-203ENST00000546803 LDHBP07195 334 aaKnown RBP20.57■□□□□ 0.88
CCDC38-203ENST00000546803 GRIK5Q16478 980 aa20.57■□□□□ 0.88
CCDC38-203ENST00000546803 ZBED3Q96IU2 234 aaPredicted RBP20.57■□□□□ 0.88
CCDC38-203ENST00000546803 ARAP2Q8WZ64 1704 aa20.56■□□□□ 0.88
CCDC38-203ENST00000546803 SMARCA5O60264 1052 aaPredicted RBP20.56■□□□□ 0.88
CCDC38-203ENST00000546803 CFAP100Q494V2 611 aa20.56■□□□□ 0.88
CCDC38-203ENST00000546803 DCPSQ96C86 337 aaKnown RBP20.56■□□□□ 0.88
CCDC38-203ENST00000546803 ZBTB47Q9UFB7 747 aaPredicted RBP20.56■□□□□ 0.88
CCDC38-203ENST00000546803 IGSF3O75054 1194 aa20.55■□□□□ 0.88
CCDC38-203ENST00000546803 ITGBL1O95965 494 aaPredicted RBP20.55■□□□□ 0.88
CCDC38-203ENST00000546803 PRDX5P30044 214 aa20.55■□□□□ 0.88
CCDC38-203ENST00000546803 CRKP46108 304 aa20.55■□□□□ 0.88
CCDC38-203ENST00000546803 RBM5P52756 815 aaKnown RBP eCLIP20.55■□□□□ 0.88
CCDC38-203ENST00000546803 NBPF9Q3BBW0 867 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms