RNA–Protein interactions for RNA: ENST00000546776.5

TROAP-204, Transcript of trophinin associated protein, humanhuman

TSL 3

Gene TROAP, Length 1,011 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-204ENST00000546776 CCDC102BQ68D86 513 aa13.66□□□□□ -0.22
TROAP-204ENST00000546776 CIAPIN1Q6FI81 312 aa13.66□□□□□ -0.22
TROAP-204ENST00000546776 ZNF804AQ7Z570 1209 aa13.66□□□□□ -0.22
TROAP-204ENST00000546776 SKAP1Q86WV1 359 aa13.66□□□□□ -0.22
TROAP-204ENST00000546776 ZNF512BQ96KM6 892 aaPredicted RBP13.66□□□□□ -0.22
TROAP-204ENST00000546776 WDR90Q96KV7 1748 aa13.66□□□□□ -0.22
TROAP-204ENST00000546776 SNAP23O00161 211 aa13.65□□□□□ -0.22
TROAP-204ENST00000546776 SEMA3EO15041 775 aa13.65□□□□□ -0.22
TROAP-204ENST00000546776 HIBADHP31937 336 aaKnown RBP13.65□□□□□ -0.22
TROAP-204ENST00000546776 PNMA8AQ86V59 439 aaPredicted RBP13.65□□□□□ -0.22
TROAP-204ENST00000546776 CNTROBQ8N137 903 aa13.65□□□□□ -0.22
TROAP-204ENST00000546776 PI4K2BQ8TCG2 481 aa13.65□□□□□ -0.22
TROAP-204ENST00000546776 DUOX1Q9NRD9 1551 aa13.64□□□□□ -0.23
TROAP-204ENST00000546776 TRIM6-TRIM34B2RNG4 842 aa13.64□□□□□ -0.23
TROAP-204ENST00000546776 FRAT2O75474 233 aaPredicted RBP13.64□□□□□ -0.23
TROAP-204ENST00000546776 ARID4AP29374 1257 aaPredicted RBP13.64□□□□□ -0.23
TROAP-204ENST00000546776 PHKA1P46020 1223 aa13.64□□□□□ -0.23
TROAP-204ENST00000546776 GYG1P46976 350 aa13.64□□□□□ -0.23
TROAP-204ENST00000546776 CXCL9Q07325 125 aa13.64□□□□□ -0.23
TROAP-204ENST00000546776 TSHZ3Q63HK5 1081 aa13.64□□□□□ -0.23
TROAP-204ENST00000546776 HAUS7Q99871 368 aa13.64□□□□□ -0.23
TROAP-204ENST00000546776 BOLA2Q9H3K6 86 aa13.64□□□□□ -0.23
TROAP-204ENST00000546776 TAF1DQ9H5J8 278 aaPredicted RBP13.64□□□□□ -0.23
TROAP-204ENST00000546776 POTECB2RU33 542 aa13.63□□□□□ -0.23
TROAP-204ENST00000546776 ZBTB22O15209 634 aa13.63□□□□□ -0.23
TROAP-204ENST00000546776 ECE2O60344 883 aa13.63□□□□□ -0.23
TROAP-204ENST00000546776 RAD17O75943 681 aa13.63□□□□□ -0.23
TROAP-204ENST00000546776 EPHX2P34913 555 aa13.63□□□□□ -0.23
TROAP-204ENST00000546776 BCAMP50895 628 aa13.63□□□□□ -0.23
TROAP-204ENST00000546776 DOK7Q18PE1 504 aa13.63□□□□□ -0.23
TROAP-204ENST00000546776 FBXO33Q7Z6M2 555 aa13.63□□□□□ -0.23
TROAP-204ENST00000546776 LDHDQ86WU2 507 aa13.63□□□□□ -0.23
TROAP-204ENST00000546776 EVI5LQ96CN4 794 aa13.63□□□□□ -0.23
TROAP-204ENST00000546776 FAM84BQ96KN1 310 aaPredicted RBP13.63□□□□□ -0.23
TROAP-204ENST00000546776 COA1Q9GZY4 146 aa13.63□□□□□ -0.23
TROAP-204ENST00000546776 DBNDD1Q9H9R9 158 aa13.63□□□□□ -0.23
TROAP-204ENST00000546776 DENND2AQ9ULE3 1009 aa13.63□□□□□ -0.23
TROAP-204ENST00000546776 AKAP11Q9UKA4 1901 aa13.62□□□□□ -0.23
TROAP-204ENST00000546776 GSPT1P15170 499 aaKnown RBP13.62□□□□□ -0.23
TROAP-204ENST00000546776 HSPA6P17066 643 aa13.62□□□□□ -0.23
TROAP-204ENST00000546776 TTF1Q15361 905 aaPredicted RBP13.62□□□□□ -0.23
TROAP-204ENST00000546776 LRRFIP1Q32MZ4 808 aaKnown RBP13.62□□□□□ -0.23
TROAP-204ENST00000546776 EAPPQ56P03 285 aaPredicted RBP13.62□□□□□ -0.23
TROAP-204ENST00000546776 CHADLQ6NUI6 762 aa13.62□□□□□ -0.23
TROAP-204ENST00000546776 CASC1Q6TDU7 716 aa13.62□□□□□ -0.23
TROAP-204ENST00000546776 PODNQ7Z5L7 613 aa13.62□□□□□ -0.23
TROAP-204ENST00000546776 RILPL2Q969X0 211 aa13.62□□□□□ -0.23
TROAP-204ENST00000546776 DNAJC2Q99543 621 aaKnown RBP13.62□□□□□ -0.23
TROAP-204ENST00000546776 CLEC11AQ9Y240 323 aa13.62□□□□□ -0.23
TROAP-204ENST00000546776 SCN4AP35499 1836 aa13.62□□□□□ -0.23
TROAP-204ENST00000546776 PDS5AQ29RF7 1337 aaKnown RBP13.62□□□□□ -0.23
TROAP-204ENST00000546776 IRS2Q9Y4H2 1338 aa13.62□□□□□ -0.23
TROAP-204ENST00000546776 COL4A5P29400 1685 aa13.61□□□□□ -0.23
TROAP-204ENST00000546776 WTIPA6NIX2 430 aaPredicted RBP13.61□□□□□ -0.23
TROAP-204ENST00000546776 H7C1D1 291 aa13.61□□□□□ -0.23
TROAP-204ENST00000546776 RPS12P25398 132 aaKnown RBP13.61□□□□□ -0.23
TROAP-204ENST00000546776 KLRK1P26718 216 aa13.61□□□□□ -0.23
TROAP-204ENST00000546776 USP50Q70EL3 339 aaPredicted RBP13.61□□□□□ -0.23
TROAP-204ENST00000546776 TICAM2Q86XR7 235 aa13.61□□□□□ -0.23
TROAP-204ENST00000546776 SPATA5Q8NB90 893 aa13.61□□□□□ -0.23
TROAP-204ENST00000546776 GPR101Q96P66 508 aaPredicted RBP13.61□□□□□ -0.23
TROAP-204ENST00000546776 PAG1Q9NWQ8 432 aa13.61□□□□□ -0.23
TROAP-204ENST00000546776 YDJCA8MPS7 323 aa13.6□□□□□ -0.23
TROAP-204ENST00000546776 HIP1O00291 1037 aa13.6□□□□□ -0.23
TROAP-204ENST00000546776 EIF5BO60841 1220 aaKnown RBP13.6□□□□□ -0.23
TROAP-204ENST00000546776 IL1R1P14778 569 aa13.6□□□□□ -0.23
TROAP-204ENST00000546776 SDSP20132 328 aa13.6□□□□□ -0.23
TROAP-204ENST00000546776 MCAMP43121 646 aa13.6□□□□□ -0.23
TROAP-204ENST00000546776 GMPSP49915 693 aaPredicted RBP13.6□□□□□ -0.23
TROAP-204ENST00000546776 SCNN1DP51172 638 aa13.6□□□□□ -0.23
TROAP-204ENST00000546776 APLP1P51693 650 aa13.6□□□□□ -0.23
TROAP-204ENST00000546776 RASGRF1Q13972 1273 aa13.6□□□□□ -0.23
TROAP-204ENST00000546776 TXNRD3Q86VQ6 643 aa13.6□□□□□ -0.23
TROAP-204ENST00000546776 ZGPATQ8N5A5 531 aaKnown RBP13.6□□□□□ -0.23
TROAP-204ENST00000546776 CD209Q9NNX6 404 aa13.6□□□□□ -0.23
TROAP-204ENST00000546776 ADARB2Q9NS39 739 aaKnown RBP13.6□□□□□ -0.23
TROAP-204ENST00000546776 GPRC5DQ9NZD1 345 aa13.6□□□□□ -0.23
TROAP-204ENST00000546776 HMG20BQ9P0W2 317 aa13.6□□□□□ -0.23
TROAP-204ENST00000546776 MYH7P12883 1935 aa13.59□□□□□ -0.23
TROAP-204ENST00000546776 GOLIM4O00461 696 aa13.59□□□□□ -0.23
TROAP-204ENST00000546776 PSMD14O00487 310 aa13.59□□□□□ -0.23
TROAP-204ENST00000546776 IGSF3O75054 1194 aa13.59□□□□□ -0.23
TROAP-204ENST00000546776 TDRD7Q8NHU6 1098 aaKnown RBP13.59□□□□□ -0.23
TROAP-204ENST00000546776 WDR66Q8TBY9 1149 aa13.59□□□□□ -0.23
TROAP-204ENST00000546776 DPF2Q92785 391 aa13.59□□□□□ -0.23
TROAP-204ENST00000546776 FSD1Q9BTV5 496 aa13.59□□□□□ -0.23
TROAP-204ENST00000546776 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.59□□□□□ -0.232e-6■■■□□ 16.8
TROAP-204ENST00000546776 SNRKQ9NRH2 765 aa13.59□□□□□ -0.23
TROAP-204ENST00000546776 RFX7Q2KHR2 1363 aa13.58□□□□□ -0.23
TROAP-204ENST00000546776 USP17L3A6NCW0 530 aa13.58□□□□□ -0.24
TROAP-204ENST00000546776 USP17L4A6NCW7 530 aa13.58□□□□□ -0.24
TROAP-204ENST00000546776 CDC45O75419 566 aa13.58□□□□□ -0.24
TROAP-204ENST00000546776 MAP4K4O95819 1239 aaPredicted RBP13.58□□□□□ -0.24
TROAP-204ENST00000546776 EPS15P42566 896 aa13.58□□□□□ -0.24
TROAP-204ENST00000546776 ZAP70P43403 619 aa13.58□□□□□ -0.24
TROAP-204ENST00000546776 SCARF1Q14162 830 aa13.58□□□□□ -0.24
TROAP-204ENST00000546776 ZSCAN25Q6NSZ9 544 aa13.58□□□□□ -0.24
TROAP-204ENST00000546776 USP17L1Q7RTZ2 530 aa13.58□□□□□ -0.24
TROAP-204ENST00000546776 KBTBD3Q8NAB2 608 aa13.58□□□□□ -0.24
TROAP-204ENST00000546776 TBC1D22AQ8WUA7 517 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms