RNA–Protein interactions for RNA: ENST00000546296.5

LTBR-215, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 783 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-215ENST00000546296 TNNI3KQ59H18 835 aa20.71■□□□□ 0.91
LTBR-215ENST00000546296 RBM26Q5T8P6 1007 aaKnown RBP20.71■□□□□ 0.91
LTBR-215ENST00000546296 USP50Q70EL3 339 aaPredicted RBP20.71■□□□□ 0.91
LTBR-215ENST00000546296 OGFOD1Q8N543 542 aa20.71■□□□□ 0.91
LTBR-215ENST00000546296 RBM46Q8TBY0 533 aaKnown RBP20.71■□□□□ 0.91
LTBR-215ENST00000546296 GMLQ99445 158 aa20.71■□□□□ 0.91
LTBR-215ENST00000546296 BCL11AQ9H165 835 aa20.71■□□□□ 0.91
LTBR-215ENST00000546296 FPGT-TNNI3KV9GXZ4 949 aa20.71■□□□□ 0.91
LTBR-215ENST00000546296 FAM205AQ6ZU69 1335 aa20.71■□□□□ 0.91
LTBR-215ENST00000546296 PHKA1P46020 1223 aa20.7■□□□□ 0.9
LTBR-215ENST00000546296 CCDC102BQ68D86 513 aa20.7■□□□□ 0.9
LTBR-215ENST00000546296 RHPN1Q8TCX5 695 aa20.7■□□□□ 0.9
LTBR-215ENST00000546296 SCN9AQ15858 1988 aa20.7■□□□□ 0.9
LTBR-215ENST00000546296 FKBP1AP62942 108 aaKnown RBP20.69■□□□□ 0.9
LTBR-215ENST00000546296 TBC1D10BQ4KMP7 808 aaPredicted RBP20.69■□□□□ 0.9
LTBR-215ENST00000546296 MFSD14BQ5SR56 506 aa20.69■□□□□ 0.9
LTBR-215ENST00000546296 SAMD7Q7Z3H4 446 aa20.69■□□□□ 0.9
LTBR-215ENST00000546296 LDHDQ86WU2 507 aa20.69■□□□□ 0.9
LTBR-215ENST00000546296 KIAA0825Q8IV33 1275 aa20.69■□□□□ 0.9
LTBR-215ENST00000546296 SMC1BQ8NDV3 1235 aa20.69■□□□□ 0.9
LTBR-215ENST00000546296 KIF1BPQ96EK5 621 aa20.69■□□□□ 0.9
LTBR-215ENST00000546296 HDAC9Q9UKV0 1011 aa20.69■□□□□ 0.9
LTBR-215ENST00000546296 SCN4AP35499 1836 aa20.69■□□□□ 0.9
LTBR-215ENST00000546296 F8W031 263 aaPredicted RBP20.68■□□□□ 0.9
LTBR-215ENST00000546296 POTEIP0CG38 1075 aa20.68■□□□□ 0.9
LTBR-215ENST00000546296 POTEJP0CG39 1038 aa20.68■□□□□ 0.9
LTBR-215ENST00000546296 ZNF280AP59817 542 aaPredicted RBP20.68■□□□□ 0.9
LTBR-215ENST00000546296 CHADLQ6NUI6 762 aa20.68■□□□□ 0.9
LTBR-215ENST00000546296 CERS5Q8N5B7 392 aa20.68■□□□□ 0.9
LTBR-215ENST00000546296 TBC1D22AQ8WUA7 517 aa20.68■□□□□ 0.9
LTBR-215ENST00000546296 CCDC8Q9H0W5 538 aaPredicted RBP20.68■□□□□ 0.9
LTBR-215ENST00000546296 IL1RAPL2Q9NP60 686 aa20.68■□□□□ 0.9
LTBR-215ENST00000546296 ZNF609O15014 1411 aa20.68■□□□□ 0.9
LTBR-215ENST00000546296 SEMA3EO15041 775 aa20.67■□□□□ 0.9
LTBR-215ENST00000546296 CCDC158Q5M9N0 1113 aa20.67■□□□□ 0.9
LTBR-215ENST00000546296 AACSQ86V21 672 aa20.67■□□□□ 0.9
LTBR-215ENST00000546296 CLASRPQ8N2M8 674 aaKnown RBP20.67■□□□□ 0.9
LTBR-215ENST00000546296 WDR66Q8TBY9 1149 aa20.67■□□□□ 0.9
LTBR-215ENST00000546296 TRPM4Q8TD43 1214 aa20.67■□□□□ 0.9
LTBR-215ENST00000546296 EAF2Q96CJ1 260 aaPredicted RBP20.67■□□□□ 0.9
LTBR-215ENST00000546296 DENND2AQ9ULE3 1009 aa20.67■□□□□ 0.9
LTBR-215ENST00000546296 MMP14P50281 582 aa20.66■□□□□ 0.9
LTBR-215ENST00000546296 C1QTNF8P60827 252 aa20.66■□□□□ 0.9
LTBR-215ENST00000546296 KIF4BQ2VIQ3 1234 aa20.66■□□□□ 0.9
LTBR-215ENST00000546296 DBNDD2Q9BQY9 259 aa20.66■□□□□ 0.9
LTBR-215ENST00000546296 DCTPP1Q9H773 170 aa20.66■□□□□ 0.9
LTBR-215ENST00000546296 MYOZ2Q9NPC6 264 aa20.66■□□□□ 0.9
LTBR-215ENST00000546296 UQCRFS1P1P0C7P4 283 aa20.65■□□□□ 0.9
LTBR-215ENST00000546296 HIRAP54198 1017 aaPredicted RBP20.65■□□□□ 0.9
LTBR-215ENST00000546296 FSTL1Q12841 308 aa20.65■□□□□ 0.9
LTBR-215ENST00000546296 TTC39AQ5SRH9 613 aa20.65■□□□□ 0.9
LTBR-215ENST00000546296 LRRCC1Q9C099 1032 aa20.65■□□□□ 0.9
LTBR-215ENST00000546296 EGFRP00533 1210 aa20.64■□□□□ 0.89
LTBR-215ENST00000546296 IFIT2P09913 472 aaKnown RBP20.64■□□□□ 0.89
LTBR-215ENST00000546296 TTF2Q9UNY4 1162 aaKnown RBP20.64■□□□□ 0.89
LTBR-215ENST00000546296 CENPBP07199 599 aaPredicted RBP20.63■□□□□ 0.89
LTBR-215ENST00000546296 RASGRF1Q13972 1273 aa20.63■□□□□ 0.89
LTBR-215ENST00000546296 MAP1SQ66K74 1059 aaPredicted RBP20.63■□□□□ 0.89
LTBR-215ENST00000546296 ZC3H15Q8WU90 426 aaKnown RBP20.63■□□□□ 0.89
LTBR-215ENST00000546296 TLR7Q9NYK1 1049 aaKnown RBP20.63■□□□□ 0.89
LTBR-215ENST00000546296 DBNLQ9UJU6 430 aaKnown RBP20.63■□□□□ 0.89
LTBR-215ENST00000546296 RBM5P52756 815 aaKnown RBP eCLIP20.62■□□□□ 0.89
LTBR-215ENST00000546296 SCARF1Q14162 830 aa20.62■□□□□ 0.89
LTBR-215ENST00000546296 DLGAP5Q15398 846 aa20.62■□□□□ 0.89
LTBR-215ENST00000546296 RWDD1Q9H446 243 aaPredicted RBP20.62■□□□□ 0.89
LTBR-215ENST00000546296 PSME4Q14997 1843 aa20.62■□□□□ 0.89
LTBR-215ENST00000546296 SMARCA5O60264 1052 aaPredicted RBP20.61■□□□□ 0.89
LTBR-215ENST00000546296 ARID4AP29374 1257 aaPredicted RBP20.61■□□□□ 0.89
LTBR-215ENST00000546296 HDAC1Q13547 482 aaPredicted RBP20.61■□□□□ 0.89
LTBR-215ENST00000546296 CNTROBQ8N137 903 aa20.61■□□□□ 0.89
LTBR-215ENST00000546296 SPATA5Q8NB90 893 aa20.61■□□□□ 0.89
LTBR-215ENST00000546296 HMG20BQ9P0W2 317 aa20.61■□□□□ 0.89
LTBR-215ENST00000546296 ZBTB47Q9UFB7 747 aaPredicted RBP20.61■□□□□ 0.89
LTBR-215ENST00000546296 SUGT1Q9Y2Z0 365 aa20.61■□□□□ 0.89
LTBR-215ENST00000546296 ZBTB22O15209 634 aa20.6■□□□□ 0.89
LTBR-215ENST00000546296 GRIK5Q16478 980 aa20.6■□□□□ 0.89
LTBR-215ENST00000546296 CFAP100Q494V2 611 aa20.6■□□□□ 0.89
LTBR-215ENST00000546296 ZGPATQ8N5A5 531 aaKnown RBP20.6■□□□□ 0.89
LTBR-215ENST00000546296 DCPSQ96C86 337 aaKnown RBP20.6■□□□□ 0.89
LTBR-215ENST00000546296 ABCF2Q9UG63 623 aa20.6■□□□□ 0.89
LTBR-215ENST00000546296 PGAP2Q9UHJ9 254 aa20.6■□□□□ 0.89
LTBR-215ENST00000546296 PDS5AQ29RF7 1337 aaKnown RBP20.59■□□□□ 0.89
LTBR-215ENST00000546296 LDHBP07195 334 aaKnown RBP20.59■□□□□ 0.89
LTBR-215ENST00000546296 NBPF9Q3BBW0 867 aa20.59■□□□□ 0.89
LTBR-215ENST00000546296 SPTY2D1Q68D10 685 aaPredicted RBP20.59■□□□□ 0.89
LTBR-215ENST00000546296 SNRKQ9NRH2 765 aa20.59■□□□□ 0.89
LTBR-215ENST00000546296 ARAP2Q8WZ64 1704 aa20.58■□□□□ 0.89
LTBR-215ENST00000546296 MAST3O60307 1309 aa20.58■□□□□ 0.89
LTBR-215ENST00000546296 COL1A1P02452 1464 aaPredicted RBP20.58■□□□□ 0.89
LTBR-215ENST00000546296 MCAMP43121 646 aa20.58■□□□□ 0.89
LTBR-215ENST00000546296 PI16Q6UXB8 463 aa20.58■□□□□ 0.89
LTBR-215ENST00000546296 ZNF512BQ96KM6 892 aaPredicted RBP20.58■□□□□ 0.89
LTBR-215ENST00000546296 SERPINA10Q9UK55 444 aa20.58■□□□□ 0.89
LTBR-215ENST00000546296 SALL1Q9NSC2 1324 aa20.57■□□□□ 0.88
LTBR-215ENST00000546296 WNT10BO00744 389 aa20.57■□□□□ 0.88
LTBR-215ENST00000546296 CRKP46108 304 aa20.57■□□□□ 0.88
LTBR-215ENST00000546296 ANGEL2Q5VTE6 544 aaKnown RBP20.57■□□□□ 0.88
LTBR-215ENST00000546296 TEKT1Q969V4 418 aa20.57■□□□□ 0.88
LTBR-215ENST00000546296 GCC1Q96CN9 775 aa20.57■□□□□ 0.88
LTBR-215ENST00000546296 GGA3Q9NZ52 723 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms