RNA–Protein interactions for RNA: ENST00000546084.5

TRAF1-203, Transcript of TNF receptor associated factor 1, humanhuman

TSL 2 BASIC

Gene TRAF1, Length 3,715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-203ENST00000546084 NAT10Q9H0A0 1025 aaKnown RBP11.35□□□□□ -0.59
TRAF1-203ENST00000546084 DDX19AQ9NUU7 478 aaKnown RBP11.35□□□□□ -0.59
TRAF1-203ENST00000546084 SPTLC3Q9NUV7 552 aa11.35□□□□□ -0.59
TRAF1-203ENST00000546084 SLC12A7Q9Y666 1083 aa11.35□□□□□ -0.59
TRAF1-203ENST00000546084 ERBB3P21860 1342 aa11.35□□□□□ -0.59
TRAF1-203ENST00000546084 SIGLEC1Q9BZZ2 1709 aa11.35□□□□□ -0.59
TRAF1-203ENST00000546084 KAZALD1Q96I82 304 aa11.35□□□□□ -0.59
TRAF1-203ENST00000546084 ZNF219Q9P2Y4 722 aaPredicted RBP11.35□□□□□ -0.59
TRAF1-203ENST00000546084 CTNNA3Q9UI47 895 aa11.35□□□□□ -0.59
TRAF1-203ENST00000546084 ZSCAN20P17040 1043 aaPredicted RBP11.35□□□□□ -0.59
TRAF1-203ENST00000546084 IARSP41252 1262 aaKnown RBP11.35□□□□□ -0.59
TRAF1-203ENST00000546084 PTPN14Q15678 1187 aa11.35□□□□□ -0.59
TRAF1-203ENST00000546084 ZNF827Q17R98 1081 aa11.35□□□□□ -0.59
TRAF1-203ENST00000546084 CADPS2Q86UW7 1296 aa11.35□□□□□ -0.59
TRAF1-203ENST00000546084 MNS1Q8NEH6 495 aa11.35□□□□□ -0.59
TRAF1-203ENST00000546084 SECISBP2LQ93073 1101 aaKnown RBP11.35□□□□□ -0.59
TRAF1-203ENST00000546084 VAT1LQ9HCJ6 419 aa11.35□□□□□ -0.59
TRAF1-203ENST00000546084 IFNKQ9P0W0 207 aa11.35□□□□□ -0.59
TRAF1-203ENST00000546084 MAPK8IP1Q9UQF2 711 aa11.35□□□□□ -0.59
TRAF1-203ENST00000546084 IL2RBP14784 551 aa11.34□□□□□ -0.59
TRAF1-203ENST00000546084 PLBD2Q8NHP8 589 aa11.34□□□□□ -0.59
TRAF1-203ENST00000546084 OSBP2Q969R2 916 aa11.34□□□□□ -0.59
TRAF1-203ENST00000546084 CLIC6Q96NY7 704 aa11.34□□□□□ -0.59
TRAF1-203ENST00000546084 GREM2Q9H772 168 aa11.34□□□□□ -0.59
TRAF1-203ENST00000546084 PLEKHG1Q9ULL1 1385 aa11.34□□□□□ -0.59
TRAF1-203ENST00000546084 EXOC5O00471 708 aa11.34□□□□□ -0.59
TRAF1-203ENST00000546084 FGAP02671 866 aa11.34□□□□□ -0.59
TRAF1-203ENST00000546084 SCARF1Q14162 830 aa11.34□□□□□ -0.59
TRAF1-203ENST00000546084 NCOA7Q8NI08 942 aa11.34□□□□□ -0.59
TRAF1-203ENST00000546084 SRCAPQ6ZRS2 3230 aa11.34□□□□□ -0.59
TRAF1-203ENST00000546084 URI1O94763 535 aaPredicted RBP11.34□□□□□ -0.59
TRAF1-203ENST00000546084 CLSTN1O94985 981 aa11.34□□□□□ -0.59
TRAF1-203ENST00000546084 MBD4O95243 580 aa11.34□□□□□ -0.59
TRAF1-203ENST00000546084 CEP135Q66GS9 1140 aa11.34□□□□□ -0.59
TRAF1-203ENST00000546084 TRMT1LQ7Z2T5 733 aaKnown RBP11.34□□□□□ -0.59
TRAF1-203ENST00000546084 CNNM3Q8NE01 707 aa11.34□□□□□ -0.59
TRAF1-203ENST00000546084 M0R2C6 588 aa11.33□□□□□ -0.6
TRAF1-203ENST00000546084 EPB41L2O43491 1005 aaKnown RBP11.33□□□□□ -0.6
TRAF1-203ENST00000546084 ZNF75DP51815 510 aa11.33□□□□□ -0.6
TRAF1-203ENST00000546084 TOB2Q14106 344 aaPredicted RBP11.33□□□□□ -0.6
TRAF1-203ENST00000546084 ZSCAN25Q6NSZ9 544 aa11.33□□□□□ -0.6
TRAF1-203ENST00000546084 DZIP3Q86Y13 1208 aaKnown RBP11.33□□□□□ -0.6
TRAF1-203ENST00000546084 PUS7LQ9H0K6 701 aaKnown RBP11.33□□□□□ -0.6
TRAF1-203ENST00000546084 HMG20BQ9P0W2 317 aa11.33□□□□□ -0.6
TRAF1-203ENST00000546084 NIP7Q9Y221 180 aaKnown RBP eCLIP11.33□□□□□ -0.6
TRAF1-203ENST00000546084 AKAP2Q9Y2D5 859 aa11.33□□□□□ -0.6
TRAF1-203ENST00000546084 CDC42BPGQ6DT37 1551 aa11.33□□□□□ -0.6
TRAF1-203ENST00000546084 DIP2BQ9P265 1576 aa11.33□□□□□ -0.6
TRAF1-203ENST00000546084 KDRP35968 1356 aa11.33□□□□□ -0.6
TRAF1-203ENST00000546084 TCHHQ07283 1943 aa11.33□□□□□ -0.6
TRAF1-203ENST00000546084 MYO5BQ9ULV0 1848 aa11.33□□□□□ -0.6
TRAF1-203ENST00000546084 G3V3G9 751 aa11.33□□□□□ -0.6
TRAF1-203ENST00000546084 ATP6V1AP38606 617 aa11.33□□□□□ -0.6
TRAF1-203ENST00000546084 SART3Q15020 963 aaKnown RBP11.33□□□□□ -0.6
TRAF1-203ENST00000546084 DCAF8Q5TAQ9 597 aa11.33□□□□□ -0.6
TRAF1-203ENST00000546084 TRIM22Q8IYM9 498 aa11.33□□□□□ -0.6
TRAF1-203ENST00000546084 CGNQ9P2M7 1197 aaKnown RBP11.33□□□□□ -0.6
TRAF1-203ENST00000546084 SLC4A4Q9Y6R1 1079 aa11.33□□□□□ -0.6
TRAF1-203ENST00000546084 KIF20BQ96Q89 1820 aa11.33□□□□□ -0.6
TRAF1-203ENST00000546084 SFPQP23246 707 aaKnown RBP eCLIP11.33□□□□□ -0.6
TRAF1-203ENST00000546084 C11orf57Q6ZUT1 292 aaPredicted RBP11.33□□□□□ -0.6
TRAF1-203ENST00000546084 TRMT44Q8IYL2 757 aaKnown RBP11.33□□□□□ -0.6
TRAF1-203ENST00000546084 GTPBP4Q9BZE4 634 aaKnown RBP11.33□□□□□ -0.6
TRAF1-203ENST00000546084 BCCIPQ9P287 314 aaKnown RBP eCLIP11.33□□□□□ -0.6
TRAF1-203ENST00000546084 CLIC4Q9Y696 253 aa11.33□□□□□ -0.6
TRAF1-203ENST00000546084 CLTCQ00610 1675 aaKnown RBP11.33□□□□□ -0.6
TRAF1-203ENST00000546084 NBPF26B4DH59 902 aa11.32□□□□□ -0.6
TRAF1-203ENST00000546084 PHKA1P46020 1223 aa11.32□□□□□ -0.6
TRAF1-203ENST00000546084 HLFQ16534 295 aa11.32□□□□□ -0.6
TRAF1-203ENST00000546084 NBPF14Q5TI25 921 aa11.32□□□□□ -0.6
TRAF1-203ENST00000546084 NBPF10Q6P3W6 841 aaKnown RBP11.32□□□□□ -0.6
TRAF1-203ENST00000546084 NBPF15Q8N660 670 aa11.32□□□□□ -0.6
TRAF1-203ENST00000546084 CACTINQ8WUQ7 758 aaKnown RBP11.32□□□□□ -0.6
TRAF1-203ENST00000546084 GTF3C6Q969F1 213 aa11.32□□□□□ -0.6
TRAF1-203ENST00000546084 FUCA2Q9BTY2 467 aa11.32□□□□□ -0.6
TRAF1-203ENST00000546084 ANO10Q9NW15 660 aa11.32□□□□□ -0.6
TRAF1-203ENST00000546084 UBE2Q2LH0YL09 131 aa11.32□□□□□ -0.6
TRAF1-203ENST00000546084 SPTLC2O15270 562 aa11.32□□□□□ -0.6
TRAF1-203ENST00000546084 ATP5JP18859 108 aa11.32□□□□□ -0.6
TRAF1-203ENST00000546084 GTF2F1P35269 517 aaKnown RBP eCLIP11.32□□□□□ -0.6
TRAF1-203ENST00000546084 IGHMBP2P38935 993 aaKnown RBP11.32□□□□□ -0.6
TRAF1-203ENST00000546084 DNA2P51530 1060 aa11.32□□□□□ -0.6
TRAF1-203ENST00000546084 STOX1Q6ZVD7 989 aa11.32□□□□□ -0.6
TRAF1-203ENST00000546084 SDR42E1Q8WUS8 393 aa11.32□□□□□ -0.6
TRAF1-203ENST00000546084 SEC31BQ9NQW1 1179 aa11.32□□□□□ -0.6
TRAF1-203ENST00000546084 ADAMTS13Q76LX8 1427 aa11.32□□□□□ -0.6
TRAF1-203ENST00000546084 SMTNL1A8MU46 457 aa11.32□□□□□ -0.6
TRAF1-203ENST00000546084 ZBTB43O43298 467 aa11.32□□□□□ -0.6
TRAF1-203ENST00000546084 PRKAB2O43741 272 aa11.32□□□□□ -0.6
TRAF1-203ENST00000546084 CYP7A1P22680 504 aa11.32□□□□□ -0.6
TRAF1-203ENST00000546084 SYKP43405 635 aa11.32□□□□□ -0.6
TRAF1-203ENST00000546084 ENOX2Q16206 610 aaKnown RBP11.32□□□□□ -0.6
TRAF1-203ENST00000546084 TM6SF1Q9BZW5 370 aa11.32□□□□□ -0.6
TRAF1-203ENST00000546084 BAZ2BQ9UIF8 2168 aaKnown RBP11.31□□□□□ -0.6
TRAF1-203ENST00000546084 FAM193AP78312 1265 aa11.31□□□□□ -0.6
TRAF1-203ENST00000546084 PPARDQ03181 441 aa11.31□□□□□ -0.6
TRAF1-203ENST00000546084 MRPS27Q92552 414 aaKnown RBP11.31□□□□□ -0.6
TRAF1-203ENST00000546084 TFCP2L1Q9NZI6 479 aa11.31□□□□□ -0.6
TRAF1-203ENST00000546084 POLR3GO15318 223 aaPredicted RBP11.31□□□□□ -0.6
TRAF1-203ENST00000546084 PGBD1Q96JS3 809 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms