RNA–Protein interactions for RNA: ENST00000545934.5

CPSF7-225, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-225ENST00000545934 HTTP42858 3142 aa21.3■■□□□ 1
CPSF7-225ENST00000545934 SNAP23O00161 211 aa21.3■■□□□ 1
CPSF7-225ENST00000545934 IL1R1P14778 569 aa21.3■■□□□ 1
CPSF7-225ENST00000545934 FOXO4P98177 505 aa21.3■■□□□ 1
CPSF7-225ENST00000545934 FZD1Q9UP38 647 aa21.3■■□□□ 1
CPSF7-225ENST00000545934 PPP2R3BQ9Y5P8 575 aa21.3■■□□□ 1
CPSF7-225ENST00000545934 ANKRD18BA2A2Z9 1011 aa21.29■■□□□ 1
CPSF7-225ENST00000545934 ALDH1A1P00352 501 aa21.29■■□□□ 1
CPSF7-225ENST00000545934 KCNJ4P48050 445 aa21.29■■□□□ 1
CPSF7-225ENST00000545934 FKBP1AP62942 108 aaKnown RBP21.29■■□□□ 1
CPSF7-225ENST00000545934 FKBP5Q13451 457 aaPredicted RBP21.29■■□□□ 1
CPSF7-225ENST00000545934 DLGAP5Q15398 846 aa21.29■■□□□ 1
CPSF7-225ENST00000545934 PCDHAC2Q9Y5I4 1007 aa21.29■■□□□ 1
CPSF7-225ENST00000545934 MANSC4A6NHS7 340 aaPredicted RBP21.28■■□□□ 1
CPSF7-225ENST00000545934 UNCXA6NJT0 531 aa21.28■■□□□ 1
CPSF7-225ENST00000545934 TAF5LO75529 589 aa21.28■■□□□ 1
CPSF7-225ENST00000545934 ZBTB48P10074 688 aaPredicted RBP21.28■■□□□ 1
CPSF7-225ENST00000545934 INHBEP58166 350 aa21.28■■□□□ 1
CPSF7-225ENST00000545934 FANCIQ9NVI1 1328 aa21.28■■□□□ 1
CPSF7-225ENST00000545934 VAMP4O75379 141 aa21.27■■□□□ 1
CPSF7-225ENST00000545934 IFNL1Q8IU54 200 aa21.27■■□□□ 1
CPSF7-225ENST00000545934 WNK4Q96J92 1243 aa21.27■■□□□ 1
CPSF7-225ENST00000545934 SPDYE2BA6NHP3 402 aa21.26■□□□□ 0.99
CPSF7-225ENST00000545934 SPDYE6P0CI01 402 aa21.26■□□□□ 0.99
CPSF7-225ENST00000545934 HELBQ8NG08 1087 aaPredicted RBP21.26■□□□□ 0.99
CPSF7-225ENST00000545934 CLMNQ96JQ2 1002 aa21.26■□□□□ 0.99
CPSF7-225ENST00000545934 PRMT6Q96LA8 375 aaPredicted RBP21.26■□□□□ 0.99
CPSF7-225ENST00000545934 AOX1Q06278 1338 aa21.26■□□□□ 0.99
CPSF7-225ENST00000545934 IGF2BP3O00425 579 aaKnown RBP eCLIP21.25■□□□□ 0.99
CPSF7-225ENST00000545934 IFIT5Q13325 482 aaKnown RBP21.25■□□□□ 0.99
CPSF7-225ENST00000545934 CFAP100Q494V2 611 aa21.25■□□□□ 0.99
CPSF7-225ENST00000545934 BEND3Q5T5X7 828 aa21.25■□□□□ 0.99
CPSF7-225ENST00000545934 SLC10A4Q96EP9 437 aa21.25■□□□□ 0.99
CPSF7-225ENST00000545934 PPP1R12BO60237 982 aaPredicted RBP21.24■□□□□ 0.99
CPSF7-225ENST00000545934 ZNF804AQ7Z570 1209 aa21.24■□□□□ 0.99
CPSF7-225ENST00000545934 CENPFP49454 3210 aa21.24■□□□□ 0.99
CPSF7-225ENST00000545934 EPHA10Q5JZY3 1008 aa21.23■□□□□ 0.99
CPSF7-225ENST00000545934 FAM205AQ6ZU69 1335 aa21.23■□□□□ 0.99
CPSF7-225ENST00000545934 CLRN2A0PK11 232 aa21.22■□□□□ 0.99
CPSF7-225ENST00000545934 F8W031 263 aaPredicted RBP21.22■□□□□ 0.99
CPSF7-225ENST00000545934 MYO1BO43795 1136 aa21.22■□□□□ 0.99
CPSF7-225ENST00000545934 USP2O75604 605 aaPredicted RBP21.22■□□□□ 0.99
CPSF7-225ENST00000545934 GJA5P36382 358 aa21.22■□□□□ 0.99
CPSF7-225ENST00000545934 SUPT20HL1Q3ZLR7 823 aa21.22■□□□□ 0.99
CPSF7-225ENST00000545934 NBPF12Q5TAG4 269 aaPredicted RBP21.22■□□□□ 0.99
CPSF7-225ENST00000545934 OTOP1Q7RTM1 612 aa21.22■□□□□ 0.99
CPSF7-225ENST00000545934 TESPA1A2RU30 521 aaPredicted RBP21.21■□□□□ 0.99
CPSF7-225ENST00000545934 F6X3S4 739 aa21.21■□□□□ 0.99
CPSF7-225ENST00000545934 LMBR1LQ6UX01 489 aa21.21■□□□□ 0.99
CPSF7-225ENST00000545934 EXOSC9Q06265 439 aaKnown RBP21.2■□□□□ 0.98
CPSF7-225ENST00000545934 WDR63Q8IWG1 891 aa21.2■□□□□ 0.98
CPSF7-225ENST00000545934 ZNF594Q96JF6 807 aaPredicted RBP21.2■□□□□ 0.98
CPSF7-225ENST00000545934 TRIM17Q9Y577 477 aa21.2■□□□□ 0.98
CPSF7-225ENST00000545934 MKI67P46013 3256 aaKnown RBP21.2■□□□□ 0.98
CPSF7-225ENST00000545934 MYH13Q9UKX3 1938 aa21.19■□□□□ 0.98
CPSF7-225ENST00000545934 BRCA2P51587 3418 aa21.19■□□□□ 0.98
CPSF7-225ENST00000545934 IREB2P48200 963 aaKnown RBP21.19■□□□□ 0.98
CPSF7-225ENST00000545934 RASA3Q14644 834 aa21.19■□□□□ 0.98
CPSF7-225ENST00000545934 TDRD7Q8NHU6 1098 aaKnown RBP21.19■□□□□ 0.98
CPSF7-225ENST00000545934 VEZTQ9HBM0 779 aa21.19■□□□□ 0.98
CPSF7-225ENST00000545934 JAG2Q9Y219 1238 aa21.19■□□□□ 0.98
CPSF7-225ENST00000545934 CHMP3Q9Y3E7 222 aa21.19■□□□□ 0.98
CPSF7-225ENST00000545934 GRM8O00222 908 aa21.18■□□□□ 0.98
CPSF7-225ENST00000545934 CCDC57Q2TAC2 916 aa21.18■□□□□ 0.98
CPSF7-225ENST00000545934 SPDYE2Q495Y8 402 aa21.18■□□□□ 0.98
CPSF7-225ENST00000545934 LDHAL6AQ6ZMR3 332 aa21.18■□□□□ 0.98
CPSF7-225ENST00000545934 ANKRD13AQ8IZ07 590 aa21.18■□□□□ 0.98
CPSF7-225ENST00000545934 PTPN18Q99952 460 aa21.18■□□□□ 0.98
CPSF7-225ENST00000545934 CRHR2Q13324 411 aa21.17■□□□□ 0.98
CPSF7-225ENST00000545934 INTS3Q68E01 1043 aaKnown RBP21.17■□□□□ 0.98
CPSF7-225ENST00000545934 ERO1AQ96HE7 468 aa21.17■□□□□ 0.98
CPSF7-225ENST00000545934 TEPSINQ96N21 525 aa21.17■□□□□ 0.98
CPSF7-225ENST00000545934 SERPINA10Q9UK55 444 aa21.17■□□□□ 0.98
CPSF7-225ENST00000545934 PTPN22Q9Y2R2 807 aa21.17■□□□□ 0.98
CPSF7-225ENST00000545934 CAP1Q01518 475 aa21.16■□□□□ 0.98
CPSF7-225ENST00000545934 CNNM1Q9NRU3 951 aa21.16■□□□□ 0.98
CPSF7-225ENST00000545934 ZNF70Q9UC06 446 aaPredicted RBP21.16■□□□□ 0.98
CPSF7-225ENST00000545934 ZSWIM8A7E2V4 1837 aa21.15■□□□□ 0.98
CPSF7-225ENST00000545934 POTEFA5A3E0 1075 aa21.15■□□□□ 0.98
CPSF7-225ENST00000545934 PLIN1O60240 522 aa21.15■□□□□ 0.98
CPSF7-225ENST00000545934 UBE4AQ14139 1066 aa21.15■□□□□ 0.98
CPSF7-225ENST00000545934 MFSD14BQ5SR56 506 aa21.15■□□□□ 0.98
CPSF7-225ENST00000545934 OTUD7BQ6GQQ9 843 aa21.15■□□□□ 0.98
CPSF7-225ENST00000545934 CD99L2Q8TCZ2 262 aa21.15■□□□□ 0.98
CPSF7-225ENST00000545934 KAZALD1Q96I82 304 aa21.15■□□□□ 0.98
CPSF7-225ENST00000545934 FAM84BQ96KN1 310 aaPredicted RBP21.15■□□□□ 0.98
CPSF7-225ENST00000545934 SPINK5Q9NQ38 1064 aaPredicted RBP21.15■□□□□ 0.98
CPSF7-225ENST00000545934 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.15■□□□□ 0.98
CPSF7-225ENST00000545934 RBM5P52756 815 aaKnown RBP eCLIP21.14■□□□□ 0.97
CPSF7-225ENST00000545934 TNFAIP1Q13829 316 aa21.14■□□□□ 0.97
CPSF7-225ENST00000545934 CDAN1Q8IWY9 1227 aa21.14■□□□□ 0.97
CPSF7-225ENST00000545934 ARMC5Q96C12 935 aa21.14■□□□□ 0.97
CPSF7-225ENST00000545934 OPTNQ96CV9 577 aa21.14■□□□□ 0.97
CPSF7-225ENST00000545934 MS4A4AQ96JQ5 239 aa21.14■□□□□ 0.97
CPSF7-225ENST00000545934 TTF2Q9UNY4 1162 aaKnown RBP21.14■□□□□ 0.97
CPSF7-225ENST00000545934 KIAA0100Q14667 2235 aaKnown RBP21.13■□□□□ 0.97
CPSF7-225ENST00000545934 ALDH1L1O75891 902 aa21.13■□□□□ 0.97
CPSF7-225ENST00000545934 HIBADHP31937 336 aaKnown RBP21.13■□□□□ 0.97
CPSF7-225ENST00000545934 GYG1P46976 350 aa21.13■□□□□ 0.97
CPSF7-225ENST00000545934 TAF7LQ5H9L4 462 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms