RNA–Protein interactions for RNA: ENST00000545445.1

LTBR-214, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 379 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-214ENST00000545445 SEC31BQ9NQW1 1179 aa14.69□□□□□ -0.06
LTBR-214ENST00000545445 NSFL1CQ9UNZ2 370 aaKnown RBP14.69□□□□□ -0.06
LTBR-214ENST00000545445 PNMA6EA0A0J9YXQ4 647 aa14.68□□□□□ -0.06
LTBR-214ENST00000545445 C6orf229H3BNL8 230 aa14.68□□□□□ -0.06
LTBR-214ENST00000545445 RFX5P48382 616 aaPredicted RBP14.68□□□□□ -0.06
LTBR-214ENST00000545445 GPSM2P81274 684 aa14.68□□□□□ -0.06
LTBR-214ENST00000545445 CELF1Q92879 486 aaKnown RBP14.68□□□□□ -0.06
LTBR-214ENST00000545445 COPRSQ9NQ92 184 aa14.68□□□□□ -0.06
LTBR-214ENST00000545445 BSDC1Q9NW68 430 aaPredicted RBP14.68□□□□□ -0.06
LTBR-214ENST00000545445 POLLQ9UGP5 575 aa14.68□□□□□ -0.06
LTBR-214ENST00000545445 HDAC9Q9UKV0 1011 aa14.68□□□□□ -0.06
LTBR-214ENST00000545445 COL4A1P02462 1669 aa14.68□□□□□ -0.06
LTBR-214ENST00000545445 PTPN12Q05209 780 aaKnown RBP14.67□□□□□ -0.06
LTBR-214ENST00000545445 LDHAL6AQ6ZMR3 332 aa14.67□□□□□ -0.06
LTBR-214ENST00000545445 ZNF296Q8WUU4 475 aaPredicted RBP14.67□□□□□ -0.06
LTBR-214ENST00000545445 PCDHB15Q9Y5E8 787 aa14.67□□□□□ -0.06
LTBR-214ENST00000545445 TAF1P21675 1872 aa14.67□□□□□ -0.06
LTBR-214ENST00000545445 CIAO1O76071 339 aa14.66□□□□□ -0.06
LTBR-214ENST00000545445 TBC1D8O95759 1140 aa14.66□□□□□ -0.06
LTBR-214ENST00000545445 PKN2Q16513 984 aaKnown RBP14.66□□□□□ -0.06
LTBR-214ENST00000545445 HSP90AB4PQ58FF6 505 aa14.66□□□□□ -0.06
LTBR-214ENST00000545445 ANGEL2Q5VTE6 544 aaKnown RBP14.66□□□□□ -0.06
LTBR-214ENST00000545445 MOB2Q70IA6 237 aa14.66□□□□□ -0.06
LTBR-214ENST00000545445 SIRT2Q8IXJ6 389 aa14.66□□□□□ -0.06
LTBR-214ENST00000545445 AKAP11Q9UKA4 1901 aa14.66□□□□□ -0.06
LTBR-214ENST00000545445 EYA2O00167 538 aa14.65□□□□□ -0.06
LTBR-214ENST00000545445 HDAC1Q13547 482 aaPredicted RBP14.65□□□□□ -0.06
LTBR-214ENST00000545445 REM2Q8IYK8 340 aaPredicted RBP14.65□□□□□ -0.06
LTBR-214ENST00000545445 RWDD1Q9H446 243 aaPredicted RBP14.65□□□□□ -0.06
LTBR-214ENST00000545445 CNNM1Q9NRU3 951 aa14.65□□□□□ -0.06
LTBR-214ENST00000545445 SCAF8Q9UPN6 1271 aaKnown RBP14.65□□□□□ -0.06
LTBR-214ENST00000545445 NOP58Q9Y2X3 529 aaKnown RBP14.65□□□□□ -0.06
LTBR-214ENST00000545445 PAPPA2Q9BXP8 1791 aa14.65□□□□□ -0.06
LTBR-214ENST00000545445 IL15P40933 162 aaPredicted RBP14.64□□□□□ -0.07
LTBR-214ENST00000545445 G3BP1Q13283 466 aaKnown RBP eCLIP14.64□□□□□ -0.07
LTBR-214ENST00000545445 SCARF1Q14162 830 aa14.64□□□□□ -0.07
LTBR-214ENST00000545445 TBC1D16Q8TBP0 767 aa14.64□□□□□ -0.07
LTBR-214ENST00000545445 ZNF594Q96JF6 807 aaPredicted RBP14.64□□□□□ -0.07
LTBR-214ENST00000545445 EYA3Q99504 573 aa14.64□□□□□ -0.07
LTBR-214ENST00000545445 ANKRD2Q9GZV1 360 aa14.64□□□□□ -0.07
LTBR-214ENST00000545445 MROH5Q6ZUA9 1318 aa14.64□□□□□ -0.07
LTBR-214ENST00000545445 UBE2Q2LH0YL09 131 aa14.63□□□□□ -0.07
LTBR-214ENST00000545445 SURF6O75683 361 aaKnown RBP14.63□□□□□ -0.07
LTBR-214ENST00000545445 VIL1P09327 827 aaKnown RBP14.63□□□□□ -0.07
LTBR-214ENST00000545445 FKBP1BP68106 108 aa14.63□□□□□ -0.07
LTBR-214ENST00000545445 ERC1Q8IUD2 1116 aa14.63□□□□□ -0.07
LTBR-214ENST00000545445 KLHDC4Q8TBB5 520 aa14.63□□□□□ -0.07
LTBR-214ENST00000545445 GCC1Q96CN9 775 aa14.63□□□□□ -0.07
LTBR-214ENST00000545445 RIPOR2Q9Y4F9 1068 aa14.63□□□□□ -0.07
LTBR-214ENST00000545445 RAB11FIP3O75154 756 aa14.62□□□□□ -0.07
LTBR-214ENST00000545445 ZNF280AP59817 542 aaPredicted RBP14.62□□□□□ -0.07
LTBR-214ENST00000545445 MKRN3Q13064 507 aaKnown RBP14.62□□□□□ -0.07
LTBR-214ENST00000545445 HABP4Q5JVS0 413 aaKnown RBP14.62□□□□□ -0.07
LTBR-214ENST00000545445 FBXO46Q6PJ61 603 aaPredicted RBP14.62□□□□□ -0.07
LTBR-214ENST00000545445 MINPP1Q9UNW1 487 aa14.62□□□□□ -0.07
LTBR-214ENST00000545445 PA2G4Q9UQ80 394 aaKnown RBP14.62□□□□□ -0.07
LTBR-214ENST00000545445 POLR2AP24928 1970 aaKnown RBP14.62□□□□□ -0.07
LTBR-214ENST00000545445 SCN9AQ15858 1988 aa14.62□□□□□ -0.07
LTBR-214ENST00000545445 GPR25O00155 361 aa14.61□□□□□ -0.07
LTBR-214ENST00000545445 UFL1O94874 794 aa14.61□□□□□ -0.07
LTBR-214ENST00000545445 OS9Q13438 667 aaPredicted RBP14.61□□□□□ -0.07
LTBR-214ENST00000545445 LRRC24Q50LG9 513 aa14.61□□□□□ -0.07
LTBR-214ENST00000545445 METTL24Q5JXM2 366 aa14.61□□□□□ -0.07
LTBR-214ENST00000545445 PRAMEF18Q5VWM3 479 aa14.61□□□□□ -0.07
LTBR-214ENST00000545445 SIL1Q9H173 461 aa14.61□□□□□ -0.07
LTBR-214ENST00000545445 DCTPP1Q9H773 170 aa14.61□□□□□ -0.07
LTBR-214ENST00000545445 PODXL2Q9NZ53 605 aa14.61□□□□□ -0.07
LTBR-214ENST00000545445 CEP126Q9P2H0 1117 aa14.61□□□□□ -0.07
LTBR-214ENST00000545445 XDHP47989 1333 aa14.61□□□□□ -0.07
LTBR-214ENST00000545445 HTTP42858 3142 aa14.6□□□□□ -0.07
LTBR-214ENST00000545445 G3V3G9 751 aa14.6□□□□□ -0.07
LTBR-214ENST00000545445 CHRNDQ07001 517 aa14.6□□□□□ -0.07
LTBR-214ENST00000545445 DCAF8Q5TAQ9 597 aa14.6□□□□□ -0.07
LTBR-214ENST00000545445 RSBN1LQ6PCB5 846 aaPredicted RBP14.6□□□□□ -0.07
LTBR-214ENST00000545445 ATG9AQ7Z3C6 839 aa14.6□□□□□ -0.07
LTBR-214ENST00000545445 PUS3Q9BZE2 481 aaKnown RBP14.6□□□□□ -0.07
LTBR-214ENST00000545445 ZC3H12CQ9C0D7 883 aaKnown RBP14.6□□□□□ -0.07
LTBR-214ENST00000545445 ANKIB1Q9P2G1 1089 aa14.6□□□□□ -0.07
LTBR-214ENST00000545445 LEMD3Q9Y2U8 911 aa14.6□□□□□ -0.07
LTBR-214ENST00000545445 MKI67P46013 3256 aaKnown RBP14.6□□□□□ -0.07
LTBR-214ENST00000545445 ZNF609O15014 1411 aa14.59□□□□□ -0.07
LTBR-214ENST00000545445 PDE8BO95263 885 aa14.59□□□□□ -0.07
LTBR-214ENST00000545445 ATP2B4P23634 1241 aa14.59□□□□□ -0.07
LTBR-214ENST00000545445 TTLL12Q14166 644 aaPredicted RBP14.59□□□□□ -0.07
LTBR-214ENST00000545445 KIF1BPQ96EK5 621 aa14.59□□□□□ -0.07
LTBR-214ENST00000545445 R3HDMLQ9H3Y0 253 aa14.59□□□□□ -0.07
LTBR-214ENST00000545445 MYOZ2Q9NPC6 264 aa14.59□□□□□ -0.07
LTBR-214ENST00000545445 AKAP2Q9Y2D5 859 aa14.59□□□□□ -0.07
LTBR-214ENST00000545445 PITPNM2Q9BZ72 1349 aa14.59□□□□□ -0.07
LTBR-214ENST00000545445 FKTNO75072 461 aa14.58□□□□□ -0.08
LTBR-214ENST00000545445 USP17L8P0C7I0 530 aa14.58□□□□□ -0.08
LTBR-214ENST00000545445 UBE4AQ14139 1066 aa14.58□□□□□ -0.08
LTBR-214ENST00000545445 AGBL3Q8NEM8 1001 aa14.58□□□□□ -0.08
LTBR-214ENST00000545445 GPR108Q9NPR9 543 aa14.58□□□□□ -0.08
LTBR-214ENST00000545445 PPP4R2Q9NY27 417 aa14.58□□□□□ -0.08
LTBR-214ENST00000545445 GGA1Q9UJY5 639 aa14.58□□□□□ -0.08
LTBR-214ENST00000545445 EXOC6BQ9Y2D4 811 aa14.58□□□□□ -0.08
LTBR-214ENST00000545445 POTEFA5A3E0 1075 aa14.57□□□□□ -0.08
LTBR-214ENST00000545445 KCNJ4P48050 445 aa14.57□□□□□ -0.08
LTBR-214ENST00000545445 TM4SF4P48230 202 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms