RNA–Protein interactions for RNA: ENST00000544778.6

BPTF-208, Transcript of bromodomain PHD finger transcription factor, humanhuman

TSL 5

Gene BPTF, Length 7,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BPTF-208ENST00000544778 MICALL1Q8N3F8 863 aa22.59■■□□□ 1.21
BPTF-208ENST00000544778 CLSTN2Q9H4D0 955 aa22.59■■□□□ 1.21
BPTF-208ENST00000544778 HCLS1P14317 486 aaPredicted RBP22.58■■□□□ 1.21
BPTF-208ENST00000544778 KRT83P78385 493 aa22.58■■□□□ 1.21
BPTF-208ENST00000544778 GPHNQ9NQX3 736 aaPredicted RBP22.58■■□□□ 1.21
BPTF-208ENST00000544778 TACC3Q9Y6A5 838 aa22.58■■□□□ 1.21
BPTF-208ENST00000544778 SYT1P21579 422 aa22.58■■□□□ 1.21
BPTF-208ENST00000544778 BIRC3Q13489 604 aa22.58■■□□□ 1.21
BPTF-208ENST00000544778 FAM204AQ9H8W3 233 aa22.58■■□□□ 1.21
BPTF-208ENST00000544778 MCM9Q9NXL9 1143 aa22.58■■□□□ 1.21
BPTF-208ENST00000544778 BICDL2A1A5D9 508 aa22.58■■□□□ 1.21
BPTF-208ENST00000544778 MAGEB6Q8N7X4 407 aa22.58■■□□□ 1.21
BPTF-208ENST00000544778 TRIM6Q9C030 488 aaPredicted RBP22.58■■□□□ 1.21
BPTF-208ENST00000544778 CCDC42Q96M95 316 aa22.58■■□□□ 1.2
BPTF-208ENST00000544778 PIK3R4Q99570 1358 aa22.58■■□□□ 1.2
BPTF-208ENST00000544778 SEL1L2Q5TEA6 688 aa22.58■■□□□ 1.2
BPTF-208ENST00000544778 TFCP2L1Q9NZI6 479 aa22.58■■□□□ 1.2
BPTF-208ENST00000544778 CHST3Q7LGC8 479 aa22.57■■□□□ 1.2
BPTF-208ENST00000544778 GINS2Q9Y248 185 aa22.57■■□□□ 1.2
BPTF-208ENST00000544778 KRT86O43790 486 aa22.57■■□□□ 1.2
BPTF-208ENST00000544778 STX10O60499 249 aa22.57■■□□□ 1.2
BPTF-208ENST00000544778 CIB2O75838 187 aa22.57■■□□□ 1.2
BPTF-208ENST00000544778 NBPF8Q3BBV2 869 aa22.57■■□□□ 1.2
BPTF-208ENST00000544778 STIM2Q9P246 746 aa22.57■■□□□ 1.2
BPTF-208ENST00000544778 NYXQ9GZU5 481 aa22.57■■□□□ 1.2
BPTF-208ENST00000544778 MTRF1LQ9UGC7 380 aaKnown RBP22.57■■□□□ 1.2
BPTF-208ENST00000544778 STX17P56962 302 aa22.57■■□□□ 1.2
BPTF-208ENST00000544778 SLC9C2Q5TAH2 1124 aa22.57■■□□□ 1.2
BPTF-208ENST00000544778 MIGA1Q8NAN2 632 aa22.57■■□□□ 1.2
BPTF-208ENST00000544778 CACYBPQ9HB71 228 aaKnown RBP22.57■■□□□ 1.2
BPTF-208ENST00000544778 ZSCAN23Q3MJ62 389 aa22.57■■□□□ 1.2
BPTF-208ENST00000544778 EP400NLQ6ZTU2 488 aa22.57■■□□□ 1.2
BPTF-208ENST00000544778 RSPH3Q86UC2 560 aa22.57■■□□□ 1.2
BPTF-208ENST00000544778 TCEANC2Q96MN5 208 aa22.57■■□□□ 1.2
BPTF-208ENST00000544778 FAM160A1Q05DH4 1040 aa22.56■■□□□ 1.2
BPTF-208ENST00000544778 KARSQ15046 597 aaKnown RBP22.56■■□□□ 1.2
BPTF-208ENST00000544778 AFG3L2Q9Y4W6 797 aa22.56■■□□□ 1.2
BPTF-208ENST00000544778 SARNPP82979 210 aaKnown RBP22.56■■□□□ 1.2
BPTF-208ENST00000544778 SETDB1Q15047 1291 aa22.56■■□□□ 1.2
BPTF-208ENST00000544778 ZSCAN22P10073 491 aaPredicted RBP22.56■■□□□ 1.2
BPTF-208ENST00000544778 ERCC3P19447 782 aa22.56■■□□□ 1.2
BPTF-208ENST00000544778 CASKIN1Q8WXD9 1431 aa22.56■■□□□ 1.2
BPTF-208ENST00000544778 PSMD6Q15008 389 aa22.56■■□□□ 1.2
BPTF-208ENST00000544778 CCDC110Q8TBZ0 833 aa22.56■■□□□ 1.2
BPTF-208ENST00000544778 LEO1Q8WVC0 666 aaPredicted RBP22.56■■□□□ 1.2
BPTF-208ENST00000544778 GIPC1O14908 333 aa22.56■■□□□ 1.2
BPTF-208ENST00000544778 SAP30BPQ9UHR5 308 aaKnown RBP22.56■■□□□ 1.2
BPTF-208ENST00000544778 SKILP12757 684 aa22.56■■□□□ 1.2
BPTF-208ENST00000544778 GSDMBQ8TAX9 411 aa22.56■■□□□ 1.2
BPTF-208ENST00000544778 MCMDC2Q4G0Z9 681 aa22.55■■□□□ 1.2
BPTF-208ENST00000544778 CCDC169A6NNP5 214 aa22.55■■□□□ 1.2
BPTF-208ENST00000544778 PICK1Q9NRD5 415 aa22.55■■□□□ 1.2
BPTF-208ENST00000544778 MTUS1Q9ULD2 1270 aa22.55■■□□□ 1.2
BPTF-208ENST00000544778 C20orf194Q5TEA3 1177 aa22.55■■□□□ 1.2
BPTF-208ENST00000544778 ITIH3Q06033 890 aa22.55■■□□□ 1.2
BPTF-208ENST00000544778 KIFAP3Q92845 792 aa22.55■■□□□ 1.2
BPTF-208ENST00000544778 STMN2Q93045 179 aa22.55■■□□□ 1.2
BPTF-208ENST00000544778 CHPF2Q9P2E5 772 aa22.55■■□□□ 1.2
BPTF-208ENST00000544778 CHMP2AO43633 222 aa22.55■■□□□ 1.2
BPTF-208ENST00000544778 CEP85LQ5SZL2 805 aa22.55■■□□□ 1.2
BPTF-208ENST00000544778 TBC1D2Q9BYX2 928 aa22.54■■□□□ 1.2
BPTF-208ENST00000544778 DTHD1Q6ZMT9 781 aa22.54■■□□□ 1.2
BPTF-208ENST00000544778 FAM135AQ9P2D6 1515 aa22.54■■□□□ 1.2
BPTF-208ENST00000544778 RTL1A6NKG5 1358 aa22.54■■□□□ 1.2
BPTF-208ENST00000544778 RTL9Q8NET4 1388 aa22.54■■□□□ 1.2
BPTF-208ENST00000544778 SAMD15Q9P1V8 674 aa22.54■■□□□ 1.2
BPTF-208ENST00000544778 FEZ2Q9UHY8 353 aaPredicted RBP22.54■■□□□ 1.2
BPTF-208ENST00000544778 ZFYP08048 801 aaPredicted RBP22.54■■□□□ 1.2
BPTF-208ENST00000544778 LZTFL1Q9NQ48 299 aa22.54■■□□□ 1.2
BPTF-208ENST00000544778 SDAD1Q9NVU7 687 aaKnown RBP eCLIP22.54■■□□□ 1.25e-8■■■□□ 16.6
BPTF-208ENST00000544778 HECW1Q76N89 1606 aa22.54■■□□□ 1.2
BPTF-208ENST00000544778 IVLP07476 585 aa22.54■■□□□ 1.2
BPTF-208ENST00000544778 FAM83GA6ND36 823 aa22.53■■□□□ 1.2
BPTF-208ENST00000544778 RIOK3O14730 519 aaKnown RBP22.53■■□□□ 1.2
BPTF-208ENST00000544778 VPS18Q9P253 973 aa22.53■■□□□ 1.2
BPTF-208ENST00000544778 TMOD4Q9NZQ9 345 aa22.53■■□□□ 1.2
BPTF-208ENST00000544778 RHOXF2BP0C7M4 288 aa22.53■■□□□ 1.2
BPTF-208ENST00000544778 SPAG1Q07617 926 aa22.53■■□□□ 1.2
BPTF-208ENST00000544778 RHOXF2Q9BQY4 288 aa22.53■■□□□ 1.2
BPTF-208ENST00000544778 CEP120Q8N960 986 aa22.53■■□□□ 1.2
BPTF-208ENST00000544778 ZCRB1Q8TBF4 217 aaKnown RBP22.53■■□□□ 1.2
BPTF-208ENST00000544778 MRPS27Q92552 414 aaKnown RBP22.53■■□□□ 1.2
BPTF-208ENST00000544778 NSFL1CQ9UNZ2 370 aaKnown RBP22.53■■□□□ 1.2
BPTF-208ENST00000544778 CALML3P27482 149 aa22.52■■□□□ 1.2
BPTF-208ENST00000544778 ZNF569Q5MCW4 686 aa22.52■■□□□ 1.2
BPTF-208ENST00000544778 TTLL3Q9Y4R7 772 aa22.52■■□□□ 1.2
BPTF-208ENST00000544778 LPXNO60711 386 aa22.52■■□□□ 1.2
BPTF-208ENST00000544778 EPB41P11171 864 aaKnown RBP22.52■■□□□ 1.2
BPTF-208ENST00000544778 CLUL1Q15846 466 aa22.52■■□□□ 1.2
BPTF-208ENST00000544778 ERCC6LQ2NKX8 1250 aa22.52■■□□□ 1.2
BPTF-208ENST00000544778 IGF1RP08069 1367 aa22.52■■□□□ 1.2
BPTF-208ENST00000544778 TRIM75PA6NK02 468 aa22.52■■□□□ 1.2
BPTF-208ENST00000544778 CALCOCO2Q13137 446 aa22.52■■□□□ 1.2
BPTF-208ENST00000544778 TRPC3Q13507 836 aa22.52■■□□□ 1.2
BPTF-208ENST00000544778 INTS8Q75QN2 995 aaKnown RBP22.52■■□□□ 1.2
BPTF-208ENST00000544778 TRIM27P14373 513 aa22.52■■□□□ 1.2
BPTF-208ENST00000544778 ABCC11Q96J66 1382 aa22.52■■□□□ 1.2
BPTF-208ENST00000544778 TTC22Q5TAA0 569 aa22.52■■□□□ 1.2
BPTF-208ENST00000544778 FAM184BQ9ULE4 1060 aa22.52■■□□□ 1.2
BPTF-208ENST00000544778 EHBP1L1Q8N3D4 1523 aa22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms