RNA–Protein interactions for RNA: ENST00000544241.6

TCF4-209, Transcript of transcription factor 4, humanhuman

TSL 2 BASIC

Gene TCF4, Length 2,264 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-209ENST00000544241 DDX54Q8TDD1 881 aaKnown RBP11.88□□□□□ -0.51
TCF4-209ENST00000544241 RTEL1Q9NZ71 1219 aa11.88□□□□□ -0.51
TCF4-209ENST00000544241 KIF5CO60282 957 aa11.88□□□□□ -0.51
TCF4-209ENST00000544241 CUTAO60888 179 aa11.88□□□□□ -0.51
TCF4-209ENST00000544241 CALRP27797 417 aaKnown RBP11.88□□□□□ -0.51
TCF4-209ENST00000544241 MNAT1P51948 309 aa11.88□□□□□ -0.51
TCF4-209ENST00000544241 NMIQ13287 307 aaPredicted RBP11.88□□□□□ -0.51
TCF4-209ENST00000544241 SART3Q15020 963 aaKnown RBP11.88□□□□□ -0.51
TCF4-209ENST00000544241 MAP9Q49MG5 647 aa11.88□□□□□ -0.51
TCF4-209ENST00000544241 CEP120Q8N960 986 aa11.88□□□□□ -0.51
TCF4-209ENST00000544241 AFAP1L1Q8TED9 768 aa11.88□□□□□ -0.51
TCF4-209ENST00000544241 FBXW7Q969H0 707 aa11.88□□□□□ -0.51
TCF4-209ENST00000544241 KIFC2Q96AC6 838 aa11.88□□□□□ -0.51
TCF4-209ENST00000544241 DHX58Q96C10 678 aa11.88□□□□□ -0.51
TCF4-209ENST00000544241 WDR24Q96S15 920 aa11.88□□□□□ -0.51
TCF4-209ENST00000544241 CDC23Q9UJX2 597 aa11.88□□□□□ -0.51
TCF4-209ENST00000544241 AKAP2Q9Y2D5 859 aa11.88□□□□□ -0.51
TCF4-209ENST00000544241 SBNO1A3KN83 1393 aa11.87□□□□□ -0.51
TCF4-209ENST00000544241 WDHD1O75717 1129 aaPredicted RBP11.87□□□□□ -0.51
TCF4-209ENST00000544241 YEATS4O95619 227 aa11.87□□□□□ -0.51
TCF4-209ENST00000544241 CCDC175P0C221 793 aa11.87□□□□□ -0.51
TCF4-209ENST00000544241 CASP8Q14790 479 aa11.87□□□□□ -0.51
TCF4-209ENST00000544241 TTLL5Q6EMB2 1281 aa11.87□□□□□ -0.51
TCF4-209ENST00000544241 OLFM4Q6UX06 510 aa11.87□□□□□ -0.51
TCF4-209ENST00000544241 MIS18AQ9NYP9 233 aa11.87□□□□□ -0.51
TCF4-209ENST00000544241 PCDHA7Q9UN72 937 aa11.87□□□□□ -0.51
TCF4-209ENST00000544241 NPHP4O75161 1426 aaPredicted RBP11.87□□□□□ -0.51
TCF4-209ENST00000544241 FAM208AQ9UK61 1670 aaKnown RBP11.87□□□□□ -0.51
TCF4-209ENST00000544241 FANCGO15287 622 aa11.86□□□□□ -0.51
TCF4-209ENST00000544241 PFKFB2O60825 505 aa11.86□□□□□ -0.51
TCF4-209ENST00000544241 ALDH1L1O75891 902 aa11.86□□□□□ -0.51
TCF4-209ENST00000544241 MTX1Q13505 466 aa11.86□□□□□ -0.51
TCF4-209ENST00000544241 IDI1Q13907 227 aa11.86□□□□□ -0.51
TCF4-209ENST00000544241 STK38Q15208 465 aa11.86□□□□□ -0.51
TCF4-209ENST00000544241 CT47A1Q5JQC4 288 aaPredicted RBP11.86□□□□□ -0.51
TCF4-209ENST00000544241 BCCIPQ9P287 314 aaKnown RBP eCLIP11.86□□□□□ -0.51
TCF4-209ENST00000544241 JCADQ9P266 1359 aa11.86□□□□□ -0.51
TCF4-209ENST00000544241 MED23Q9ULK4 1368 aa11.86□□□□□ -0.51
TCF4-209ENST00000544241 EBAG9O00559 213 aa11.86□□□□□ -0.51
TCF4-209ENST00000544241 NDUFA8P51970 172 aa11.86□□□□□ -0.51
TCF4-209ENST00000544241 E2F4Q16254 413 aa11.86□□□□□ -0.51
TCF4-209ENST00000544241 USPL1Q5W0Q7 1092 aa11.86□□□□□ -0.51
TCF4-209ENST00000544241 TCEANC2Q96MN5 208 aa11.86□□□□□ -0.51
TCF4-209ENST00000544241 FSD1Q9BTV5 496 aa11.86□□□□□ -0.51
TCF4-209ENST00000544241 NAA15Q9BXJ9 866 aaKnown RBP11.86□□□□□ -0.51
TCF4-209ENST00000544241 FAM204AQ9H8W3 233 aa11.86□□□□□ -0.51
TCF4-209ENST00000544241 A6NNZ2 444 aa11.85□□□□□ -0.51
TCF4-209ENST00000544241 TUBB8Q3ZCM7 444 aa11.85□□□□□ -0.51
TCF4-209ENST00000544241 Q6ZUG5 572 aa11.85□□□□□ -0.51
TCF4-209ENST00000544241 FAM227BQ96M60 508 aa11.85□□□□□ -0.51
TCF4-209ENST00000544241 BICC1Q9H694 974 aaKnown RBP11.85□□□□□ -0.51
TCF4-209ENST00000544241 ANKZF1Q9H8Y5 726 aa11.85□□□□□ -0.51
TCF4-209ENST00000544241 U3KPZ7 1027 aaPredicted RBP11.85□□□□□ -0.51
TCF4-209ENST00000544241 A0A1B0GVL5 298 aa11.85□□□□□ -0.51
TCF4-209ENST00000544241 AARSP49588 968 aaKnown RBP eCLIP11.85□□□□□ -0.51
TCF4-209ENST00000544241 SCRN1Q12765 414 aa11.85□□□□□ -0.51
TCF4-209ENST00000544241 SF3B2Q13435 895 aaKnown RBP11.85□□□□□ -0.51
TCF4-209ENST00000544241 ABCB6Q9NP58 842 aa11.85□□□□□ -0.51
TCF4-209ENST00000544241 POLR3EQ9NVU0 708 aa11.85□□□□□ -0.51
TCF4-209ENST00000544241 MYH15Q9Y2K3 1946 aa11.85□□□□□ -0.51
TCF4-209ENST00000544241 A0A087WWV3 80 aa11.84□□□□□ -0.51
TCF4-209ENST00000544241 CTAGE15A4D2H0 777 aa11.84□□□□□ -0.51
TCF4-209ENST00000544241 ZNF202O95125 648 aa11.84□□□□□ -0.51
TCF4-209ENST00000544241 CTAGE8P0CG41 777 aa11.84□□□□□ -0.51
TCF4-209ENST00000544241 TDO2P48775 406 aa11.84□□□□□ -0.51
TCF4-209ENST00000544241 MLECQ14165 292 aa11.84□□□□□ -0.51
TCF4-209ENST00000544241 WHAMMP3Q1A5X7 153 aa11.84□□□□□ -0.51
TCF4-209ENST00000544241 SPECC1LQ69YQ0 1117 aa11.84□□□□□ -0.51
TCF4-209ENST00000544241 FOXR1Q6PIV2 292 aa11.84□□□□□ -0.51
TCF4-209ENST00000544241 WAPLQ7Z5K2 1190 aa11.84□□□□□ -0.51
TCF4-209ENST00000544241 CTAGE6Q86UF2 777 aa11.84□□□□□ -0.51
TCF4-209ENST00000544241 TMEM139Q8IV31 216 aa11.84□□□□□ -0.51
TCF4-209ENST00000544241 CTAGE4Q8IX94 777 aa11.84□□□□□ -0.51
TCF4-209ENST00000544241 LINC00301Q8NCQ3 95 aa11.84□□□□□ -0.51
TCF4-209ENST00000544241 NSUN7Q8NE18 718 aaKnown RBP11.84□□□□□ -0.51
TCF4-209ENST00000544241 STAG1Q8WVM7 1258 aa11.84□□□□□ -0.51
TCF4-209ENST00000544241 A1CFQ9NQ94 594 aaKnown RBP11.84□□□□□ -0.51
TCF4-209ENST00000544241 SUFUQ9UMX1 484 aa11.84□□□□□ -0.51
TCF4-209ENST00000544241 SPATA31D1Q6ZQQ2 1576 aa11.84□□□□□ -0.51
TCF4-209ENST00000544241 DIP2CQ9Y2E4 1556 aa11.84□□□□□ -0.51
TCF4-209ENST00000544241 PTPDC1A2A3K4 754 aa11.84□□□□□ -0.51
TCF4-209ENST00000544241 CTAGE9A4FU28 777 aa11.84□□□□□ -0.51
TCF4-209ENST00000544241 SATB1Q01826 763 aa11.84□□□□□ -0.51
TCF4-209ENST00000544241 WDR93Q6P2C0 686 aa11.84□□□□□ -0.51
TCF4-209ENST00000544241 AACSQ86V21 672 aa11.84□□□□□ -0.51
TCF4-209ENST00000544241 SMARCC1Q92922 1105 aaPredicted RBP11.84□□□□□ -0.51
TCF4-209ENST00000544241 ALKQ9UM73 1620 aa11.83□□□□□ -0.52
TCF4-209ENST00000544241 SHTN1A0MZ66 631 aa11.83□□□□□ -0.52
TCF4-209ENST00000544241 WASLO00401 505 aaPredicted RBP11.83□□□□□ -0.52
TCF4-209ENST00000544241 SPTLC2O15270 562 aa11.83□□□□□ -0.52
TCF4-209ENST00000544241 RNF40O75150 1001 aa11.83□□□□□ -0.52
TCF4-209ENST00000544241 MYCNP04198 464 aaPredicted RBP11.83□□□□□ -0.52
TCF4-209ENST00000544241 CMA1P23946 247 aa11.83□□□□□ -0.52
TCF4-209ENST00000544241 KIF4BQ2VIQ3 1234 aa11.83□□□□□ -0.52
TCF4-209ENST00000544241 BRAPQ7Z569 592 aa11.83□□□□□ -0.52
TCF4-209ENST00000544241 ARHGEF25Q86VW2 580 aa11.83□□□□□ -0.52
TCF4-209ENST00000544241 SPATS2Q86XZ4 545 aaKnown RBP11.83□□□□□ -0.52
TCF4-209ENST00000544241 PDILTQ8N807 584 aa11.83□□□□□ -0.52
TCF4-209ENST00000544241 HOOK1Q9UJC3 728 aaKnown RBP11.83□□□□□ -0.52
TCF4-209ENST00000544241 CCDC61Q9Y6R9 512 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms