RNA–Protein interactions for RNA: ENST00000544052.6

SCFD1-207, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-207ENST00000544052 ENC1O14682 589 aa5.73□□□□□ -1.49
SCFD1-207ENST00000544052 PAGE1O75459 146 aa5.73□□□□□ -1.49
SCFD1-207ENST00000544052 BMP4P12644 408 aa5.73□□□□□ -1.49
SCFD1-207ENST00000544052 CPB1P15086 417 aa5.73□□□□□ -1.49
SCFD1-207ENST00000544052 EIF2AK2P19525 551 aaKnown RBP5.73□□□□□ -1.49
SCFD1-207ENST00000544052 ZNF468Q5VIY5 522 aaPredicted RBP5.73□□□□□ -1.49
SCFD1-207ENST00000544052 CEP135Q66GS9 1140 aa5.73□□□□□ -1.49
SCFD1-207ENST00000544052 KANK3Q6NY19 840 aa5.73□□□□□ -1.49
SCFD1-207ENST00000544052 FOXR1Q6PIV2 292 aa5.73□□□□□ -1.49
SCFD1-207ENST00000544052 RELL1Q8IUW5 271 aa5.73□□□□□ -1.49
SCFD1-207ENST00000544052 SCARF2Q96GP6 870 aaPredicted RBP5.73□□□□□ -1.49
SCFD1-207ENST00000544052 SEC31BQ9NQW1 1179 aa5.73□□□□□ -1.49
SCFD1-207ENST00000544052 KLF15Q9UIH9 416 aa5.73□□□□□ -1.49
SCFD1-207ENST00000544052 GHRHP01286 108 aa5.73□□□□□ -1.49
SCFD1-207ENST00000544052 EIF4A3P38919 411 aaKnown RBP5.73□□□□□ -1.49
SCFD1-207ENST00000544052 FAM160A1Q05DH4 1040 aa5.73□□□□□ -1.49
SCFD1-207ENST00000544052 FBXL19Q6PCT2 694 aa5.73□□□□□ -1.49
SCFD1-207ENST00000544052 FAM35AQ86V20 835 aa5.73□□□□□ -1.49
SCFD1-207ENST00000544052 GPRASP2Q96D09 838 aa5.73□□□□□ -1.49
SCFD1-207ENST00000544052 TMEM74Q96NL1 305 aa5.73□□□□□ -1.49
SCFD1-207ENST00000544052 ZNF576Q9H609 170 aa5.73□□□□□ -1.49
SCFD1-207ENST00000544052 NAGPAQ9UK23 515 aa5.73□□□□□ -1.49
SCFD1-207ENST00000544052 ATF4P18848 351 aaPredicted RBP5.72□□□□□ -1.49
SCFD1-207ENST00000544052 GAS6Q14393 721 aa5.72□□□□□ -1.49
SCFD1-207ENST00000544052 LYPD4Q6UWN0 246 aa5.72□□□□□ -1.49
SCFD1-207ENST00000544052 MCF2L2Q86YR7 1114 aa5.72□□□□□ -1.49
SCFD1-207ENST00000544052 NECAB3Q96P71 396 aaPredicted RBP5.72□□□□□ -1.49
SCFD1-207ENST00000544052 PERM1Q5SV97 790 aa5.71□□□□□ -1.49
SCFD1-207ENST00000544052 SV2BQ7L1I2 683 aa5.71□□□□□ -1.49
SCFD1-207ENST00000544052 DPH6Q7L8W6 267 aa5.71□□□□□ -1.49
SCFD1-207ENST00000544052 KIAA0825Q8IV33 1275 aa5.71□□□□□ -1.49
SCFD1-207ENST00000544052 ANKRD24Q8TF21 1146 aa5.71□□□□□ -1.49
SCFD1-207ENST00000544052 ZNF296Q8WUU4 475 aaPredicted RBP5.71□□□□□ -1.49
SCFD1-207ENST00000544052 EAF1Q96JC9 268 aaPredicted RBP5.71□□□□□ -1.49
SCFD1-207ENST00000544052 SIN3BO75182 1162 aa5.71□□□□□ -1.5
SCFD1-207ENST00000544052 IGHA1P01876 353 aa5.71□□□□□ -1.5
SCFD1-207ENST00000544052 PF4P02776 101 aa5.71□□□□□ -1.5
SCFD1-207ENST00000544052 CELA2BP08218 269 aaPredicted RBP5.71□□□□□ -1.5
SCFD1-207ENST00000544052 FGRP09769 529 aa5.71□□□□□ -1.5
SCFD1-207ENST00000544052 MX2P20592 715 aa5.71□□□□□ -1.5
SCFD1-207ENST00000544052 LIG3P49916 1009 aa5.71□□□□□ -1.5
SCFD1-207ENST00000544052 VPS37DQ86XT2 251 aa5.71□□□□□ -1.5
SCFD1-207ENST00000544052 PHC3Q8NDX5 983 aa5.71□□□□□ -1.5
SCFD1-207ENST00000544052 PLD4Q96BZ4 506 aa5.71□□□□□ -1.5
SCFD1-207ENST00000544052 RHOVQ96L33 236 aa5.71□□□□□ -1.5
SCFD1-207ENST00000544052 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.71□□□□□ -1.51e-9■□□□□ 11.2
SCFD1-207ENST00000544052 ENAMQ9NRM1 1142 aa5.71□□□□□ -1.5
SCFD1-207ENST00000544052 MBIPQ9NS73 344 aa5.71□□□□□ -1.5
SCFD1-207ENST00000544052 GPN3Q9UHW5 284 aaPredicted RBP5.71□□□□□ -1.5
SCFD1-207ENST00000544052 CCDC180Q9P1Z9 1646 aa5.71□□□□□ -1.5
SCFD1-207ENST00000544052 PWP1Q13610 501 aa5.7□□□□□ -1.5
SCFD1-207ENST00000544052 TTBK2Q6IQ55 1244 aa5.7□□□□□ -1.5
SCFD1-207ENST00000544052 TNFRSF25Q93038 417 aa5.7□□□□□ -1.5
SCFD1-207ENST00000544052 CEP44Q9C0F1 390 aa5.7□□□□□ -1.5
SCFD1-207ENST00000544052 LACRTQ9GZZ8 138 aa5.7□□□□□ -1.5
SCFD1-207ENST00000544052 SMG9Q9H0W8 520 aaKnown RBP5.7□□□□□ -1.5
SCFD1-207ENST00000544052 RBSNQ9H1K0 784 aa5.7□□□□□ -1.5
SCFD1-207ENST00000544052 SLC6A14Q9UN76 642 aa5.7□□□□□ -1.5
SCFD1-207ENST00000544052 TRIM33Q9UPN9 1127 aa5.7□□□□□ -1.5
SCFD1-207ENST00000544052 SMNDC1O75940 238 aaKnown RBP eCLIP5.7□□□□□ -1.5
SCFD1-207ENST00000544052 CAMK2GQ13555 558 aaPredicted RBP5.7□□□□□ -1.5
SCFD1-207ENST00000544052 RASIP1Q5U651 963 aa5.7□□□□□ -1.5
SCFD1-207ENST00000544052 GPAT2Q6NUI2 795 aa5.7□□□□□ -1.5
SCFD1-207ENST00000544052 GOLM1Q8NBJ4 401 aa5.7□□□□□ -1.5
SCFD1-207ENST00000544052 RASGRP4Q8TDF6 673 aa5.7□□□□□ -1.5
SCFD1-207ENST00000544052 BSNDQ8WZ55 320 aa5.7□□□□□ -1.5
SCFD1-207ENST00000544052 LNPKQ9C0E8 428 aa5.7□□□□□ -1.5
SCFD1-207ENST00000544052 UBP1Q9NZI7 540 aa5.7□□□□□ -1.5
SCFD1-207ENST00000544052 NEURL1BA8MQ27 555 aa5.69□□□□□ -1.5
SCFD1-207ENST00000544052 TFE3P19532 575 aaPredicted RBP5.69□□□□□ -1.5
SCFD1-207ENST00000544052 GARTP22102 1010 aa5.69□□□□□ -1.5
SCFD1-207ENST00000544052 ADH7P40394 386 aa5.69□□□□□ -1.5
SCFD1-207ENST00000544052 CRKP46108 304 aa5.69□□□□□ -1.5
SCFD1-207ENST00000544052 PCSK7Q16549 785 aa5.69□□□□□ -1.5
SCFD1-207ENST00000544052 ZNF423Q2M1K9 1284 aa5.69□□□□□ -1.5
SCFD1-207ENST00000544052 PCNX4Q63HM2 1172 aa5.69□□□□□ -1.5
SCFD1-207ENST00000544052 ELMSAN1Q6PJG2 1045 aa5.69□□□□□ -1.5
SCFD1-207ENST00000544052 VN1R5Q7Z5H4 357 aa5.69□□□□□ -1.5
SCFD1-207ENST00000544052 FCHSD1Q86WN1 690 aa5.69□□□□□ -1.5
SCFD1-207ENST00000544052 MICALL1Q8N3F8 863 aa5.69□□□□□ -1.5
SCFD1-207ENST00000544052 PMFBP1Q8TBY8 1022 aa5.69□□□□□ -1.5
SCFD1-207ENST00000544052 LPIN3Q9BQK8 851 aa5.69□□□□□ -1.5
SCFD1-207ENST00000544052 CLEC4MQ9H2X3 399 aaPredicted RBP5.69□□□□□ -1.5
SCFD1-207ENST00000544052 ZFYVE1Q9HBF4 777 aa5.69□□□□□ -1.5
SCFD1-207ENST00000544052 SH2B1Q9NRF2 756 aaPredicted RBP5.69□□□□□ -1.5
SCFD1-207ENST00000544052 TMEM39AQ9NV64 488 aa5.69□□□□□ -1.5
SCFD1-207ENST00000544052 RLBP1P12271 317 aa5.68□□□□□ -1.5
SCFD1-207ENST00000544052 AGMOQ6ZNB7 445 aa5.68□□□□□ -1.5
SCFD1-207ENST00000544052 EFR3BQ9Y2G0 817 aa5.68□□□□□ -1.5
SCFD1-207ENST00000544052 PCDHB5Q9Y5E4 795 aa5.68□□□□□ -1.5
SCFD1-207ENST00000544052 SMARCA5O60264 1052 aaPredicted RBP5.68□□□□□ -1.5
SCFD1-207ENST00000544052 GREM1O60565 184 aa5.68□□□□□ -1.5
SCFD1-207ENST00000544052 NASPP49321 788 aaPredicted RBP5.68□□□□□ -1.5
SCFD1-207ENST00000544052 GDF6Q6KF10 455 aaPredicted RBP5.68□□□□□ -1.5
SCFD1-207ENST00000544052 PSAPL1Q6NUJ1 521 aa5.68□□□□□ -1.5
SCFD1-207ENST00000544052 STK35Q8TDR2 534 aa5.68□□□□□ -1.5
SCFD1-207ENST00000544052 GINM1Q9NU53 330 aa5.68□□□□□ -1.5
SCFD1-207ENST00000544052 SOX13Q9UN79 622 aa5.68□□□□□ -1.5
SCFD1-207ENST00000544052 IGF1RP08069 1367 aa5.67□□□□□ -1.5
SCFD1-207ENST00000544052 BMP6P22004 513 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms