RNA–Protein interactions for RNA: ENST00000543233.2

CDH4-201, Transcript of cadherin 4, humanhuman

TSL 2 BASIC

Gene CDH4, Length 3,117 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4-201ENST00000543233 LSG1Q9H089 658 aaKnown RBP13.05□□□□□ -0.32
CDH4-201ENST00000543233 ZBTB3Q9H5J0 574 aa13.05□□□□□ -0.32
CDH4-201ENST00000543233 LRRC37A3O60309 1634 aa13.05□□□□□ -0.32
CDH4-201ENST00000543233 GCKRQ14397 625 aa13.05□□□□□ -0.32
CDH4-201ENST00000543233 CAMK4Q16566 473 aa13.05□□□□□ -0.32
CDH4-201ENST00000543233 SNRPA1P09661 255 aaKnown RBP13.04□□□□□ -0.32
CDH4-201ENST00000543233 LIG3P49916 1009 aa13.04□□□□□ -0.32
CDH4-201ENST00000543233 NBPF10Q6P3W6 841 aaKnown RBP13.04□□□□□ -0.32
CDH4-201ENST00000543233 TADA2BQ86TJ2 420 aa13.04□□□□□ -0.32
CDH4-201ENST00000543233 MEGF6O75095 1541 aa13.04□□□□□ -0.32
CDH4-201ENST00000543233 A1BGP04217 495 aa13.04□□□□□ -0.32
CDH4-201ENST00000543233 USP8P40818 1118 aa13.04□□□□□ -0.32
CDH4-201ENST00000543233 CORO7P57737 925 aa13.04□□□□□ -0.32
CDH4-201ENST00000543233 TRDNQ13061 729 aa13.04□□□□□ -0.32
CDH4-201ENST00000543233 NMIQ13287 307 aaPredicted RBP13.04□□□□□ -0.32
CDH4-201ENST00000543233 CCDC83Q8IWF9 413 aa13.04□□□□□ -0.32
CDH4-201ENST00000543233 NECAB1Q8N987 351 aa13.04□□□□□ -0.32
CDH4-201ENST00000543233 EPC1Q9H2F5 836 aa13.04□□□□□ -0.32
CDH4-201ENST00000543233 TTC36A6NLP5 189 aa13.04□□□□□ -0.32
CDH4-201ENST00000543233 LARGE1O95461 756 aa13.04□□□□□ -0.32
CDH4-201ENST00000543233 PAX7P23759 505 aa13.04□□□□□ -0.32
CDH4-201ENST00000543233 CADPS2Q86UW7 1296 aa13.04□□□□□ -0.32
CDH4-201ENST00000543233 HOMER1Q86YM7 354 aa13.04□□□□□ -0.32
CDH4-201ENST00000543233 FAM200AQ8TCP9 573 aa13.04□□□□□ -0.32
CDH4-201ENST00000543233 FMNL2Q96PY5 1086 aa13.04□□□□□ -0.32
CDH4-201ENST00000543233 ZSCAN16Q9H4T2 348 aaPredicted RBP13.04□□□□□ -0.32
CDH4-201ENST00000543233 KDM6AO15550 1401 aaPredicted RBP13.03□□□□□ -0.32
CDH4-201ENST00000543233 SNW1Q13573 536 aaKnown RBP13.03□□□□□ -0.32
CDH4-201ENST00000543233 NEUROD6Q96NK8 337 aa13.03□□□□□ -0.32
CDH4-201ENST00000543233 PXDNLA1KZ92 1463 aa13.03□□□□□ -0.32
CDH4-201ENST00000543233 CAND2O75155 1236 aa13.03□□□□□ -0.32
CDH4-201ENST00000543233 ERLIN2O94905 339 aa13.03□□□□□ -0.32
CDH4-201ENST00000543233 ANAPC15P60006 121 aa13.03□□□□□ -0.32
CDH4-201ENST00000543233 CCDC144BQ3MJ40 725 aa13.03□□□□□ -0.32
CDH4-201ENST00000543233 TTLL7Q6ZT98 887 aa13.03□□□□□ -0.32
CDH4-201ENST00000543233 CCDC144CPQ8IYA2 1237 aa13.03□□□□□ -0.32
CDH4-201ENST00000543233 SASH3O75995 380 aa13.02□□□□□ -0.32
CDH4-201ENST00000543233 ZRANB2O95218 330 aaKnown RBP eCLIP13.02□□□□□ -0.32
CDH4-201ENST00000543233 TFCP2Q12800 502 aa13.02□□□□□ -0.32
CDH4-201ENST00000543233 ERC1Q8IUD2 1116 aa13.02□□□□□ -0.32
CDH4-201ENST00000543233 EFCAB13Q8IY85 973 aa13.02□□□□□ -0.32
CDH4-201ENST00000543233 CKAP2LQ8IYA6 745 aa13.02□□□□□ -0.32
CDH4-201ENST00000543233 A0A0D9SFI3 127 aa13.02□□□□□ -0.33
CDH4-201ENST00000543233 KIF3CO14782 793 aa13.02□□□□□ -0.33
CDH4-201ENST00000543233 PDE6BP35913 854 aa13.02□□□□□ -0.33
CDH4-201ENST00000543233 MCM2P49736 904 aa13.02□□□□□ -0.33
CDH4-201ENST00000543233 ZNF75DP51815 510 aa13.02□□□□□ -0.33
CDH4-201ENST00000543233 UBE2HP62256 183 aa13.02□□□□□ -0.33
CDH4-201ENST00000543233 ISM2Q6H9L7 571 aa13.02□□□□□ -0.33
CDH4-201ENST00000543233 RUFY3Q7L099 469 aa13.02□□□□□ -0.33
CDH4-201ENST00000543233 RUFY2Q8WXA3 655 aa13.02□□□□□ -0.33
CDH4-201ENST00000543233 DCAF5Q96JK2 942 aa13.02□□□□□ -0.33
CDH4-201ENST00000543233 METTL22Q9BUU2 404 aaPredicted RBP13.02□□□□□ -0.33
CDH4-201ENST00000543233 TAF6LQ9Y6J9 622 aa13.02□□□□□ -0.33
CDH4-201ENST00000543233 RDXP35241 583 aaKnown RBP13.02□□□□□ -0.33
CDH4-201ENST00000543233 STK3Q13188 491 aa13.02□□□□□ -0.33
CDH4-201ENST00000543233 LMBR1LQ6UX01 489 aa13.02□□□□□ -0.33
CDH4-201ENST00000543233 SRRTQ9BXP5 876 aaKnown RBP13.02□□□□□ -0.33
CDH4-201ENST00000543233 AOX1Q06278 1338 aa13.01□□□□□ -0.33
CDH4-201ENST00000543233 EVA1CP58658 441 aa13.01□□□□□ -0.33
CDH4-201ENST00000543233 MTX1Q13505 466 aa13.01□□□□□ -0.33
CDH4-201ENST00000543233 FBXW10Q5XX13 1052 aa13.01□□□□□ -0.33
CDH4-201ENST00000543233 CCAR2Q8N163 923 aaKnown RBP13.01□□□□□ -0.33
CDH4-201ENST00000543233 N4BP2L2Q92802 583 aaPredicted RBP13.01□□□□□ -0.33
CDH4-201ENST00000543233 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.01□□□□□ -0.33
CDH4-201ENST00000543233 RBM8AQ9Y5S9 174 aaKnown RBP13.01□□□□□ -0.33
CDH4-201ENST00000543233 TTC41PQ6P2S7 1318 aa13.01□□□□□ -0.33
CDH4-201ENST00000543233 VPS37CA5D8V6 355 aaPredicted RBP13.01□□□□□ -0.33
CDH4-201ENST00000543233 PPFIA3O75145 1194 aa13.01□□□□□ -0.33
CDH4-201ENST00000543233 AP1ARQ63HQ0 302 aa13.01□□□□□ -0.33
CDH4-201ENST00000543233 CCDC129Q6ZRS4 1044 aa13.01□□□□□ -0.33
CDH4-201ENST00000543233 DDX46Q7L014 1031 aaKnown RBP13.01□□□□□ -0.33
CDH4-201ENST00000543233 SMC3Q9UQE7 1217 aa13.01□□□□□ -0.33
CDH4-201ENST00000543233 WDR33Q9C0J8 1336 aaKnown RBP13.01□□□□□ -0.33
CDH4-201ENST00000543233 FRMD3A2A2Y4 597 aa13□□□□□ -0.33
CDH4-201ENST00000543233 PIP4K2BP78356 416 aa13□□□□□ -0.33
CDH4-201ENST00000543233 EVI5LQ96CN4 794 aa13□□□□□ -0.33
CDH4-201ENST00000543233 ZNF594Q96JF6 807 aaPredicted RBP13□□□□□ -0.33
CDH4-201ENST00000543233 SEC62Q99442 399 aaKnown RBP13□□□□□ -0.33
CDH4-201ENST00000543233 ORC3Q9UBD5 711 aaPredicted RBP13□□□□□ -0.33
CDH4-201ENST00000543233 RGPD5Q99666 1765 aa13□□□□□ -0.33
CDH4-201ENST00000543233 MCM6Q14566 821 aa13□□□□□ -0.33
CDH4-201ENST00000543233 ANO6Q4KMQ2 910 aa13□□□□□ -0.33
CDH4-201ENST00000543233 FERMT3Q86UX7 667 aa13□□□□□ -0.33
CDH4-201ENST00000543233 DBNDD2Q9BQY9 259 aa13□□□□□ -0.33
CDH4-201ENST00000543233 ARFGAP3Q9NP61 516 aa13□□□□□ -0.33
CDH4-201ENST00000543233 CPSF2Q9P2I0 782 aaKnown RBP13□□□□□ -0.33
CDH4-201ENST00000543233 PHACTR2O75167 634 aa12.99□□□□□ -0.33
CDH4-201ENST00000543233 TBC1D8O95759 1140 aa12.99□□□□□ -0.33
CDH4-201ENST00000543233 NF2P35240 595 aa12.99□□□□□ -0.33
CDH4-201ENST00000543233 CUL4AQ13619 759 aa12.99□□□□□ -0.33
CDH4-201ENST00000543233 ZKSCAN8Q15776 578 aaPredicted RBP12.99□□□□□ -0.33
CDH4-201ENST00000543233 CPLX2Q6PUV4 134 aaKnown RBP12.99□□□□□ -0.33
CDH4-201ENST00000543233 NYAP1Q6ZVC0 841 aa12.99□□□□□ -0.33
CDH4-201ENST00000543233 BRINP3Q76B58 766 aa12.99□□□□□ -0.33
CDH4-201ENST00000543233 ZNF589Q86UQ0 364 aaPredicted RBP12.99□□□□□ -0.33
CDH4-201ENST00000543233 IQUBQ8NA54 791 aa12.99□□□□□ -0.33
CDH4-201ENST00000543233 KLHL33A6NCF5 533 aa12.99□□□□□ -0.33
CDH4-201ENST00000543233 URI1O94763 535 aaPredicted RBP12.99□□□□□ -0.33
CDH4-201ENST00000543233 ZKSCAN1P17029 563 aaPredicted RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms