RNA–Protein interactions for RNA: ENST00000542570.5

TOP3A-208, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-208ENST00000542570 CFAP45Q9UL16 551 aa11.83□□□□□ -0.52
TOP3A-208ENST00000542570 SIGLEC1Q9BZZ2 1709 aa11.83□□□□□ -0.52
TOP3A-208ENST00000542570 H7C1W4 665 aa11.83□□□□□ -0.52
TOP3A-208ENST00000542570 SMC2O95347 1197 aa11.83□□□□□ -0.52
TOP3A-208ENST00000542570 LDHCP07864 332 aa11.83□□□□□ -0.52
TOP3A-208ENST00000542570 PDIA6Q15084 440 aa11.83□□□□□ -0.52
TOP3A-208ENST00000542570 FILIP1Q7Z7B0 1213 aa11.83□□□□□ -0.52
TOP3A-208ENST00000542570 GJD4Q96KN9 370 aaPredicted RBP11.83□□□□□ -0.52
TOP3A-208ENST00000542570 PPLO60437 1756 aa11.82□□□□□ -0.52
TOP3A-208ENST00000542570 FGAP02671 866 aa11.82□□□□□ -0.52
TOP3A-208ENST00000542570 ANAPC15P60006 121 aa11.82□□□□□ -0.52
TOP3A-208ENST00000542570 TBC1D9BQ66K14 1250 aa11.82□□□□□ -0.52
TOP3A-208ENST00000542570 ZNF804AQ7Z570 1209 aa11.82□□□□□ -0.52
TOP3A-208ENST00000542570 SNX21Q969T3 373 aa11.82□□□□□ -0.52
TOP3A-208ENST00000542570 ATF5Q9Y2D1 282 aaPredicted RBP11.82□□□□□ -0.52
TOP3A-208ENST00000542570 PTPDC1A2A3K4 754 aa11.82□□□□□ -0.52
TOP3A-208ENST00000542570 RXRBP28702 533 aa11.82□□□□□ -0.52
TOP3A-208ENST00000542570 PDE4BQ07343 736 aa11.82□□□□□ -0.52
TOP3A-208ENST00000542570 ITPK1Q13572 414 aa11.82□□□□□ -0.52
TOP3A-208ENST00000542570 KIAA0825Q8IV33 1275 aa11.82□□□□□ -0.52
TOP3A-208ENST00000542570 CELF1Q92879 486 aaKnown RBP11.82□□□□□ -0.52
TOP3A-208ENST00000542570 ARHGEF1Q92888 912 aaKnown RBP11.82□□□□□ -0.52
TOP3A-208ENST00000542570 CYP2D7A0A087X1C5 515 aa11.82□□□□□ -0.52
TOP3A-208ENST00000542570 USP17L12C9JPN9 530 aa11.82□□□□□ -0.52
TOP3A-208ENST00000542570 USP17L21D6R901 530 aa11.82□□□□□ -0.52
TOP3A-208ENST00000542570 SERPINB2P05120 415 aa11.82□□□□□ -0.52
TOP3A-208ENST00000542570 HSPD1P10809 573 aaKnown RBP11.82□□□□□ -0.52
TOP3A-208ENST00000542570 PDE6AP16499 860 aa11.82□□□□□ -0.52
TOP3A-208ENST00000542570 HSPA4P34932 840 aa11.82□□□□□ -0.52
TOP3A-208ENST00000542570 PRKG1Q13976 671 aa11.82□□□□□ -0.52
TOP3A-208ENST00000542570 ME3Q16798 604 aa11.82□□□□□ -0.52
TOP3A-208ENST00000542570 DPP8Q6V1X1 898 aaPredicted RBP11.82□□□□□ -0.52
TOP3A-208ENST00000542570 PI4K2BQ8TCG2 481 aa11.82□□□□□ -0.52
TOP3A-208ENST00000542570 KAT14Q9H8E8 782 aa11.82□□□□□ -0.52
TOP3A-208ENST00000542570 STK32BQ9NY57 414 aa11.82□□□□□ -0.52
TOP3A-208ENST00000542570 GGA1Q9UJY5 639 aa11.82□□□□□ -0.52
TOP3A-208ENST00000542570 GJA3Q9Y6H8 435 aa11.82□□□□□ -0.52
TOP3A-208ENST00000542570 SCARF1Q14162 830 aa11.81□□□□□ -0.52
TOP3A-208ENST00000542570 CCAR2Q8N163 923 aaKnown RBP11.81□□□□□ -0.52
TOP3A-208ENST00000542570 FSIP1Q8NA03 581 aa11.81□□□□□ -0.52
TOP3A-208ENST00000542570 TGFBRAP1Q8WUH2 860 aa11.81□□□□□ -0.52
TOP3A-208ENST00000542570 ESR2Q92731 530 aa11.81□□□□□ -0.52
TOP3A-208ENST00000542570 PUS7LQ9H0K6 701 aaKnown RBP11.81□□□□□ -0.52
TOP3A-208ENST00000542570 POLA2Q14181 598 aa11.81□□□□□ -0.52
TOP3A-208ENST00000542570 OSBP2Q969R2 916 aa11.81□□□□□ -0.52
TOP3A-208ENST00000542570 DLC1Q96QB1 1528 aa11.81□□□□□ -0.52
TOP3A-208ENST00000542570 DYNLL1P63167 89 aaKnown RBP11.81□□□□□ -0.52
TOP3A-208ENST00000542570 ZYXQ15942 572 aaKnown RBP11.81□□□□□ -0.52
TOP3A-208ENST00000542570 WDR78Q5VTH9 848 aa11.81□□□□□ -0.52
TOP3A-208ENST00000542570 TEX11Q8IYF3 940 aa11.81□□□□□ -0.52
TOP3A-208ENST00000542570 ERCC4Q92889 916 aaPredicted RBP11.81□□□□□ -0.52
TOP3A-208ENST00000542570 RPS6KB1P23443 525 aa11.8□□□□□ -0.52
TOP3A-208ENST00000542570 SPTY2D1Q68D10 685 aaPredicted RBP11.8□□□□□ -0.52
TOP3A-208ENST00000542570 MAP2P11137 1827 aaKnown RBP11.8□□□□□ -0.52
TOP3A-208ENST00000542570 ADD1P35611 737 aaKnown RBP11.8□□□□□ -0.52
TOP3A-208ENST00000542570 CHMP4BP1P59074 171 aa11.8□□□□□ -0.52
TOP3A-208ENST00000542570 HAUS7Q99871 368 aa11.8□□□□□ -0.52
TOP3A-208ENST00000542570 MED14O60244 1454 aa11.8□□□□□ -0.52
TOP3A-208ENST00000542570 E7EWF7 191 aa11.8□□□□□ -0.52
TOP3A-208ENST00000542570 CYP21A2P08686 494 aa11.8□□□□□ -0.52
TOP3A-208ENST00000542570 DIXDC1Q155Q3 683 aa11.8□□□□□ -0.52
TOP3A-208ENST00000542570 RTN1Q16799 776 aa11.8□□□□□ -0.52
TOP3A-208ENST00000542570 MFSD14BQ5SR56 506 aa11.8□□□□□ -0.52
TOP3A-208ENST00000542570 CCDC43Q96MW1 224 aaKnown RBP11.8□□□□□ -0.52
TOP3A-208ENST00000542570 CCDC192P0DO97 292 aa11.79□□□□□ -0.52
TOP3A-208ENST00000542570 HMGN5P82970 282 aaKnown RBP11.79□□□□□ -0.52
TOP3A-208ENST00000542570 TTLL12Q14166 644 aaPredicted RBP11.79□□□□□ -0.52
TOP3A-208ENST00000542570 FEZ1Q99689 392 aa11.79□□□□□ -0.52
TOP3A-208ENST00000542570 IL25Q9H293 177 aa11.79□□□□□ -0.52
TOP3A-208ENST00000542570 USP25Q9UHP3 1055 aa11.79□□□□□ -0.52
TOP3A-208ENST00000542570 TPCN1Q9ULQ1 816 aa11.79□□□□□ -0.52
TOP3A-208ENST00000542570 OGFOD1Q8N543 542 aa11.79□□□□□ -0.52
TOP3A-208ENST00000542570 RBM17Q96I25 401 aaKnown RBP11.79□□□□□ -0.52
TOP3A-208ENST00000542570 CDK5RAP3Q96JB5 506 aa11.79□□□□□ -0.52
TOP3A-208ENST00000542570 ANKRD2Q9GZV1 360 aa11.79□□□□□ -0.52
TOP3A-208ENST00000542570 DBNDD1Q9H9R9 158 aa11.79□□□□□ -0.52
TOP3A-208ENST00000542570 STAP2Q9UGK3 403 aa11.79□□□□□ -0.52
TOP3A-208ENST00000542570 MMP10P09238 476 aa11.79□□□□□ -0.52
TOP3A-208ENST00000542570 SPECC1Q5M775 1068 aa11.79□□□□□ -0.52
TOP3A-208ENST00000542570 CCDC196A0A1B0GTZ2 297 aa11.79□□□□□ -0.52
TOP3A-208ENST00000542570 F13A1P00488 732 aa11.79□□□□□ -0.52
TOP3A-208ENST00000542570 HEATR3Q7Z4Q2 680 aa11.79□□□□□ -0.52
TOP3A-208ENST00000542570 LSG1Q9H089 658 aaKnown RBP11.79□□□□□ -0.52
TOP3A-208ENST00000542570 HELLSQ9NRZ9 838 aa11.79□□□□□ -0.52
TOP3A-208ENST00000542570 DENND2AQ9ULE3 1009 aa11.79□□□□□ -0.52
TOP3A-208ENST00000542570 ERBB4Q15303 1308 aa11.78□□□□□ -0.52
TOP3A-208ENST00000542570 H0YIN7 160 aa11.78□□□□□ -0.52
TOP3A-208ENST00000542570 JMYQ8N9B5 988 aa11.78□□□□□ -0.52
TOP3A-208ENST00000542570 PLIN2Q99541 437 aa11.78□□□□□ -0.52
TOP3A-208ENST00000542570 DACT1Q9NYF0 836 aa11.78□□□□□ -0.52
TOP3A-208ENST00000542570 SEC63Q9UGP8 760 aaKnown RBP11.78□□□□□ -0.52
TOP3A-208ENST00000542570 M0R2C6 588 aa11.78□□□□□ -0.52
TOP3A-208ENST00000542570 GADD45BO75293 160 aaPredicted RBP11.78□□□□□ -0.52
TOP3A-208ENST00000542570 EN1Q05925 392 aaPredicted RBP11.78□□□□□ -0.52
TOP3A-208ENST00000542570 OLFM4Q6UX06 510 aa11.78□□□□□ -0.52
TOP3A-208ENST00000542570 SCAND2PQ9GZW5 306 aaPredicted RBP11.78□□□□□ -0.52
TOP3A-208ENST00000542570 MST1RQ04912 1400 aa11.78□□□□□ -0.52
TOP3A-208ENST00000542570 LARGE1O95461 756 aa11.78□□□□□ -0.52
TOP3A-208ENST00000542570 KRT18P05783 430 aaKnown RBP11.78□□□□□ -0.52
TOP3A-208ENST00000542570 GRM1Q13255 1194 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms