RNA–Protein interactions for RNA: ENST00000541562.5

VARS2-211, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,566 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-211ENST00000541562 NDUFA8P51970 172 aa17.58■□□□□ 0.4
VARS2-211ENST00000541562 TMEM87AQ8NBN3 555 aa17.58■□□□□ 0.4
VARS2-211ENST00000541562 MINDY4BA8MYZ0 360 aa17.58■□□□□ 0.4
VARS2-211ENST00000541562 LMOD1P29536 600 aaPredicted RBP17.58■□□□□ 0.4
VARS2-211ENST00000541562 PRDM1O75626 825 aa17.57■□□□□ 0.4
VARS2-211ENST00000541562 LETM1O95202 739 aaPredicted RBP17.57■□□□□ 0.4
VARS2-211ENST00000541562 IMMTQ16891 758 aaKnown RBP17.57■□□□□ 0.4
VARS2-211ENST00000541562 UTYO14607 1347 aa17.57■□□□□ 0.4
VARS2-211ENST00000541562 HEG1Q9ULI3 1381 aa17.57■□□□□ 0.4
VARS2-211ENST00000541562 FDPSP14324 419 aaKnown RBP17.57■□□□□ 0.4
VARS2-211ENST00000541562 ARMT1Q9H993 441 aa17.57■□□□□ 0.4
VARS2-211ENST00000541562 PCDHA7Q9UN72 937 aa17.57■□□□□ 0.4
VARS2-211ENST00000541562 KIF28PB7ZC32 967 aa17.56■□□□□ 0.4
VARS2-211ENST00000541562 ZMYM1Q5SVZ6 1142 aa17.56■□□□□ 0.4
VARS2-211ENST00000541562 CLSTN2Q9H4D0 955 aa17.56■□□□□ 0.4
VARS2-211ENST00000541562 IRS4O14654 1257 aaPredicted RBP17.56■□□□□ 0.4
VARS2-211ENST00000541562 SYNE3Q6ZMZ3 975 aa17.56■□□□□ 0.4
VARS2-211ENST00000541562 PIH1D3Q9NQM4 214 aaKnown RBP17.56■□□□□ 0.4
VARS2-211ENST00000541562 RABL6Q3YEC7 729 aaPredicted RBP17.56■□□□□ 0.4
VARS2-211ENST00000541562 KCNJ14Q9UNX9 436 aa17.56■□□□□ 0.4
VARS2-211ENST00000541562 ZHX1Q9UKY1 873 aaPredicted RBP17.55■□□□□ 0.4
VARS2-211ENST00000541562 CFAP45Q9UL16 551 aa17.55■□□□□ 0.4
VARS2-211ENST00000541562 TRDNQ13061 729 aa17.55■□□□□ 0.4
VARS2-211ENST00000541562 HS1BP3Q53T59 392 aa17.55■□□□□ 0.4
VARS2-211ENST00000541562 ILDR1Q86SU0 546 aaPredicted RBP17.55■□□□□ 0.4
VARS2-211ENST00000541562 SLAIN2Q9P270 581 aa17.55■□□□□ 0.4
VARS2-211ENST00000541562 TCIRG1Q13488 830 aa17.54■□□□□ 0.4
VARS2-211ENST00000541562 DPCR1Q3MIW9 517 aa17.54■□□□□ 0.4
VARS2-211ENST00000541562 MAGEB6Q8N7X4 407 aa17.54■□□□□ 0.4
VARS2-211ENST00000541562 CYP2D7A0A087X1C5 515 aa17.54■□□□□ 0.4
VARS2-211ENST00000541562 TNNT1P13805 278 aa17.54■□□□□ 0.4
VARS2-211ENST00000541562 CHAF1AQ13111 956 aaPredicted RBP17.54■□□□□ 0.4
VARS2-211ENST00000541562 PPP4R3BQ5MIZ7 849 aa17.54■□□□□ 0.4
VARS2-211ENST00000541562 CYB5R4Q7L1T6 521 aa17.54■□□□□ 0.4
VARS2-211ENST00000541562 MARF1Q9Y4F3 1742 aaKnown RBP17.54■□□□□ 0.4
VARS2-211ENST00000541562 ZNF532Q9HCE3 1301 aa17.54■□□□□ 0.4
VARS2-211ENST00000541562 ZNF75DP51815 510 aa17.54■□□□□ 0.4
VARS2-211ENST00000541562 TBC1D10CQ8IV04 446 aa17.54■□□□□ 0.4
VARS2-211ENST00000541562 SPATA31A3Q5VYP0 1347 aa17.53■□□□□ 0.4
VARS2-211ENST00000541562 GOLGA6L6A8MZA4 724 aa17.53■□□□□ 0.4
VARS2-211ENST00000541562 PFKFB2O60825 505 aa17.53■□□□□ 0.4
VARS2-211ENST00000541562 BCAMP50895 628 aa17.53■□□□□ 0.4
VARS2-211ENST00000541562 ZNF827Q17R98 1081 aa17.53■□□□□ 0.4
VARS2-211ENST00000541562 SLC51AQ86UW1 340 aa17.53■□□□□ 0.4
VARS2-211ENST00000541562 SLC26A6Q9BXS9 759 aa17.53■□□□□ 0.4
VARS2-211ENST00000541562 U2AF2P26368 475 aaKnown RBP eCLIP17.53■□□□□ 0.47e-8■□□□□ 9.4
VARS2-211ENST00000541562 UVSSAQ2YD98 709 aa17.53■□□□□ 0.4
VARS2-211ENST00000541562 AIDAQ96BJ3 306 aa17.53■□□□□ 0.4
VARS2-211ENST00000541562 CCDC191Q8NCU4 936 aa17.53■□□□□ 0.4
VARS2-211ENST00000541562 KCNB2Q92953 911 aa17.53■□□□□ 0.4
VARS2-211ENST00000541562 BCL2L12Q9HB09 334 aa17.53■□□□□ 0.4
VARS2-211ENST00000541562 GRAMD1CQ8IYS0 662 aa17.52■□□□□ 0.4
VARS2-211ENST00000541562 KIAA1524Q8TCG1 905 aa17.52■□□□□ 0.4
VARS2-211ENST00000541562 DDX19AQ9NUU7 478 aaKnown RBP17.52■□□□□ 0.4
VARS2-211ENST00000541562 PCDH11XQ9BZA7 1347 aa17.52■□□□□ 0.4
VARS2-211ENST00000541562 PCDH11YQ9BZA8 1340 aa17.52■□□□□ 0.4
VARS2-211ENST00000541562 FOXN1O15353 648 aa17.52■□□□□ 0.39
VARS2-211ENST00000541562 FOXP2O15409 715 aa17.52■□□□□ 0.39
VARS2-211ENST00000541562 ANTXR2P58335 489 aa17.52■□□□□ 0.39
VARS2-211ENST00000541562 SDR42E1Q8WUS8 393 aa17.52■□□□□ 0.39
VARS2-211ENST00000541562 STAMQ92783 540 aa17.52■□□□□ 0.39
VARS2-211ENST00000541562 ZSCAN25Q6NSZ9 544 aa17.51■□□□□ 0.39
VARS2-211ENST00000541562 SLC4A9Q96Q91 983 aa17.51■□□□□ 0.39
VARS2-211ENST00000541562 PDCL3Q9H2J4 239 aa17.51■□□□□ 0.39
VARS2-211ENST00000541562 KIF3AQ9Y496 699 aa17.51■□□□□ 0.39
VARS2-211ENST00000541562 EVX2Q03828 476 aa17.51■□□□□ 0.39
VARS2-211ENST00000541562 USPL1Q5W0Q7 1092 aa17.51■□□□□ 0.39
VARS2-211ENST00000541562 ALG1Q9BT22 464 aa17.51■□□□□ 0.39
VARS2-211ENST00000541562 MBD4O95243 580 aa17.51■□□□□ 0.39
VARS2-211ENST00000541562 CDC27P30260 824 aa17.51■□□□□ 0.39
VARS2-211ENST00000541562 TMC6Q7Z403 805 aa17.51■□□□□ 0.39
VARS2-211ENST00000541562 ZNF710Q8N1W2 664 aa17.51■□□□□ 0.39
VARS2-211ENST00000541562 MPHOSPH8Q99549 860 aa17.51■□□□□ 0.39
VARS2-211ENST00000541562 ATG3Q9NT62 314 aa17.51■□□□□ 0.39
VARS2-211ENST00000541562 CARMIL3Q8ND23 1372 aa17.51■□□□□ 0.39
VARS2-211ENST00000541562 LRRC37A3O60309 1634 aa17.51■□□□□ 0.39
VARS2-211ENST00000541562 ATP1A3P13637 1013 aa17.5■□□□□ 0.39
VARS2-211ENST00000541562 CASP1P29466 404 aa17.5■□□□□ 0.39
VARS2-211ENST00000541562 DZIP3Q86Y13 1208 aaKnown RBP17.5■□□□□ 0.39
VARS2-211ENST00000541562 IFNKQ9P0W0 207 aa17.5■□□□□ 0.39
VARS2-211ENST00000541562 PALLDQ8WX93 1383 aa17.5■□□□□ 0.39
VARS2-211ENST00000541562 GUCY1A2P33402 732 aa17.5■□□□□ 0.39
VARS2-211ENST00000541562 MCM5P33992 734 aa17.5■□□□□ 0.39
VARS2-211ENST00000541562 ANKRD18BA2A2Z9 1011 aa17.5■□□□□ 0.39
VARS2-211ENST00000541562 EXOSC10Q01780 885 aaKnown RBP17.5■□□□□ 0.39
VARS2-211ENST00000541562 TTLL11Q8NHH1 800 aa17.5■□□□□ 0.39
VARS2-211ENST00000541562 WDR17Q8IZU2 1322 aa17.5■□□□□ 0.39
VARS2-211ENST00000541562 IFIT3O14879 490 aaKnown RBP17.49■□□□□ 0.39
VARS2-211ENST00000541562 SKILP12757 684 aa17.49■□□□□ 0.39
VARS2-211ENST00000541562 GTF2E1P29083 439 aaPredicted RBP17.49■□□□□ 0.39
VARS2-211ENST00000541562 TDO2P48775 406 aa17.49■□□□□ 0.39
VARS2-211ENST00000541562 METAP2P50579 478 aaKnown RBP eCLIP17.49■□□□□ 0.39
VARS2-211ENST00000541562 PNOCQ13519 176 aa17.49■□□□□ 0.39
VARS2-211ENST00000541562 HELLSQ9NRZ9 838 aa17.49■□□□□ 0.39
VARS2-211ENST00000541562 STARD3NLO95772 234 aa17.49■□□□□ 0.39
VARS2-211ENST00000541562 TMEM67Q5HYA8 995 aa17.49■□□□□ 0.39
VARS2-211ENST00000541562 CCDC102BQ68D86 513 aa17.49■□□□□ 0.39
VARS2-211ENST00000541562 NCOA7Q8NI08 942 aa17.49■□□□□ 0.39
VARS2-211ENST00000541562 LRP2BPQ9P2M1 347 aa17.49■□□□□ 0.39
VARS2-211ENST00000541562 ZNF396Q96N95 335 aaPredicted RBP17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms