RNA–Protein interactions for RNA: ENST00000540755.5

CYB561A3-216, Transcript of cytochrome b561 family member A3, humanhuman

TSL 1 (best)

Gene CYB561A3, Length 1,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-216ENST00000540755 ZBTB22O15209 634 aa17.17■□□□□ 0.34
CYB561A3-216ENST00000540755 C21orf2O43822 256 aa17.17■□□□□ 0.34
CYB561A3-216ENST00000540755 MCCP23508 829 aa17.17■□□□□ 0.34
CYB561A3-216ENST00000540755 KCNJ4P48050 445 aa17.17■□□□□ 0.34
CYB561A3-216ENST00000540755 CAVIN4Q5BKX8 364 aa17.17■□□□□ 0.34
CYB561A3-216ENST00000540755 KIAA1211Q6ZU35 1233 aa17.17■□□□□ 0.34
CYB561A3-216ENST00000540755 KIF2CQ99661 725 aa17.17■□□□□ 0.34
CYB561A3-216ENST00000540755 RRAGCQ9HB90 399 aa17.17■□□□□ 0.34
CYB561A3-216ENST00000540755 ZFYP08048 801 aaPredicted RBP17.16■□□□□ 0.34
CYB561A3-216ENST00000540755 BCAMP50895 628 aa17.16■□□□□ 0.34
CYB561A3-216ENST00000540755 STYK1Q6J9G0 422 aa17.16■□□□□ 0.34
CYB561A3-216ENST00000540755 SPATA5Q8NB90 893 aa17.16■□□□□ 0.34
CYB561A3-216ENST00000540755 MASTLQ96GX5 879 aa17.16■□□□□ 0.34
CYB561A3-216ENST00000540755 HELLSQ9NRZ9 838 aa17.16■□□□□ 0.34
CYB561A3-216ENST00000540755 GNL3LQ9NVN8 582 aaKnown RBP17.16■□□□□ 0.34
CYB561A3-216ENST00000540755 HMG20BQ9P0W2 317 aa17.16■□□□□ 0.34
CYB561A3-216ENST00000540755 IRS2Q9Y4H2 1338 aa17.15■□□□□ 0.34
CYB561A3-216ENST00000540755 RNF113AO15541 343 aaKnown RBP17.15■□□□□ 0.34
CYB561A3-216ENST00000540755 CYP2E1P05181 493 aaPredicted RBP17.15■□□□□ 0.34
CYB561A3-216ENST00000540755 ALDH1B1P30837 517 aa17.15■□□□□ 0.34
CYB561A3-216ENST00000540755 RASGRF1Q13972 1273 aa17.15■□□□□ 0.34
CYB561A3-216ENST00000540755 MCMDC2Q4G0Z9 681 aa17.15■□□□□ 0.34
CYB561A3-216ENST00000540755 PRPF40BQ6NWY9 871 aaKnown RBP17.15■□□□□ 0.34
CYB561A3-216ENST00000540755 PI16Q6UXB8 463 aa17.15■□□□□ 0.34
CYB561A3-216ENST00000540755 DNAJC5GQ8N7S2 189 aa17.15■□□□□ 0.34
CYB561A3-216ENST00000540755 ZNF219Q9P2Y4 722 aaPredicted RBP17.15■□□□□ 0.34
CYB561A3-216ENST00000540755 CCDC171Q6TFL3 1326 aa17.14■□□□□ 0.33
CYB561A3-216ENST00000540755 LTBP3Q9NS15 1303 aa17.14■□□□□ 0.33
CYB561A3-216ENST00000540755 GLTPD2A6NH11 291 aa17.14■□□□□ 0.33
CYB561A3-216ENST00000540755 HSPA4P34932 840 aa17.14■□□□□ 0.33
CYB561A3-216ENST00000540755 FSTL1Q12841 308 aa17.14■□□□□ 0.33
CYB561A3-216ENST00000540755 ZMYM1Q5SVZ6 1142 aa17.14■□□□□ 0.33
CYB561A3-216ENST00000540755 FBXO33Q7Z6M2 555 aa17.14■□□□□ 0.33
CYB561A3-216ENST00000540755 SP8Q8IXZ3 490 aa17.14■□□□□ 0.33
CYB561A3-216ENST00000540755 IL17RAQ96F46 866 aa17.14■□□□□ 0.33
CYB561A3-216ENST00000540755 FAM84BQ96KN1 310 aaPredicted RBP17.14■□□□□ 0.33
CYB561A3-216ENST00000540755 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.14■□□□□ 0.33
CYB561A3-216ENST00000540755 ANKIB1Q9P2G1 1089 aa17.14■□□□□ 0.33
CYB561A3-216ENST00000540755 WTIPA6NIX2 430 aaPredicted RBP17.13■□□□□ 0.33
CYB561A3-216ENST00000540755 PPEF1O14829 653 aaPredicted RBP17.13■□□□□ 0.33
CYB561A3-216ENST00000540755 SEMA3EO15041 775 aa17.13■□□□□ 0.33
CYB561A3-216ENST00000540755 ATP2B4P23634 1241 aa17.13■□□□□ 0.33
CYB561A3-216ENST00000540755 GYG1P46976 350 aa17.13■□□□□ 0.33
CYB561A3-216ENST00000540755 ANAPC15P60006 121 aa17.13■□□□□ 0.33
CYB561A3-216ENST00000540755 ZSCAN25Q6NSZ9 544 aa17.13■□□□□ 0.33
CYB561A3-216ENST00000540755 C15orf52Q6ZUT6 534 aaKnown RBP17.13■□□□□ 0.33
CYB561A3-216ENST00000540755 CNKSR1Q969H4 720 aa17.13■□□□□ 0.33
CYB561A3-216ENST00000540755 PODXL2Q9NZ53 605 aa17.13■□□□□ 0.33
CYB561A3-216ENST00000540755 PDS5AQ29RF7 1337 aaKnown RBP17.13■□□□□ 0.33
CYB561A3-216ENST00000540755 GPSM2P81274 684 aa17.12■□□□□ 0.33
CYB561A3-216ENST00000540755 VPS37DQ86XT2 251 aa17.12■□□□□ 0.33
CYB561A3-216ENST00000540755 C7orf43Q8WVR3 580 aa17.12■□□□□ 0.33
CYB561A3-216ENST00000540755 PIH1D3Q9NQM4 214 aaKnown RBP17.12■□□□□ 0.33
CYB561A3-216ENST00000540755 DENND2AQ9ULE3 1009 aa17.12■□□□□ 0.33
CYB561A3-216ENST00000540755 ATP6V0A2Q9Y487 856 aa17.12■□□□□ 0.33
CYB561A3-216ENST00000540755 CHGBP05060 677 aa17.12■□□□□ 0.33
CYB561A3-216ENST00000540755 KLRK1P26718 216 aa17.12■□□□□ 0.33
CYB561A3-216ENST00000540755 HIBADHP31937 336 aaKnown RBP17.12■□□□□ 0.33
CYB561A3-216ENST00000540755 HTRA3P83110 453 aa17.12■□□□□ 0.33
CYB561A3-216ENST00000540755 BECN1Q14457 450 aa17.12■□□□□ 0.33
CYB561A3-216ENST00000540755 RABEP1Q15276 862 aa17.12■□□□□ 0.33
CYB561A3-216ENST00000540755 ZNF589Q86UQ0 364 aaPredicted RBP17.12■□□□□ 0.33
CYB561A3-216ENST00000540755 MAP4K1Q92918 833 aa17.12■□□□□ 0.33
CYB561A3-216ENST00000540755 TAOK3Q9H2K8 898 aa17.12■□□□□ 0.33
CYB561A3-216ENST00000540755 COL1A1P02452 1464 aaPredicted RBP17.11■□□□□ 0.33
CYB561A3-216ENST00000540755 POTECB2RU33 542 aa17.11■□□□□ 0.33
CYB561A3-216ENST00000540755 ADD2P35612 726 aa17.11■□□□□ 0.33
CYB561A3-216ENST00000540755 PTH1RQ03431 593 aa17.11■□□□□ 0.33
CYB561A3-216ENST00000540755 APPBP2Q92624 585 aa17.11■□□□□ 0.33
CYB561A3-216ENST00000540755 SNX21Q969T3 373 aa17.11■□□□□ 0.33
CYB561A3-216ENST00000540755 GGA1Q9UJY5 639 aa17.11■□□□□ 0.33
CYB561A3-216ENST00000540755 NSFL1CQ9UNZ2 370 aaKnown RBP17.11■□□□□ 0.33
CYB561A3-216ENST00000540755 SNED1Q8TER0 1413 aa17.1■□□□□ 0.33
CYB561A3-216ENST00000540755 UBE3CQ15386 1083 aa17.1■□□□□ 0.33
CYB561A3-216ENST00000540755 SLC51AQ86UW1 340 aa17.1■□□□□ 0.33
CYB561A3-216ENST00000540755 PCNTO95613 3336 aa17.1■□□□□ 0.33
CYB561A3-216ENST00000540755 MAST3O60307 1309 aa17.09■□□□□ 0.33
CYB561A3-216ENST00000540755 UFL1O94874 794 aa17.09■□□□□ 0.33
CYB561A3-216ENST00000540755 VEGFAP15692 232 aaPredicted RBP17.09■□□□□ 0.33
CYB561A3-216ENST00000540755 MAP3K12Q12852 859 aa17.09■□□□□ 0.33
CYB561A3-216ENST00000540755 TXNRD3Q86VQ6 643 aa17.09■□□□□ 0.33
CYB561A3-216ENST00000540755 SMC1BQ8NDV3 1235 aa17.09■□□□□ 0.33
CYB561A3-216ENST00000540755 IL27Q8NEV9 243 aa17.09■□□□□ 0.33
CYB561A3-216ENST00000540755 KCNB2Q92953 911 aa17.09■□□□□ 0.33
CYB561A3-216ENST00000540755 SEC62Q99442 399 aaKnown RBP17.09■□□□□ 0.33
CYB561A3-216ENST00000540755 MAST2Q6P0Q8 1798 aa17.09■□□□□ 0.33
CYB561A3-216ENST00000540755 DUOX1Q9NRD9 1551 aa17.08■□□□□ 0.32
CYB561A3-216ENST00000540755 IDH1O75874 414 aaKnown RBP17.08■□□□□ 0.32
CYB561A3-216ENST00000540755 NECTIN1Q15223 517 aa17.08■□□□□ 0.32
CYB561A3-216ENST00000540755 WASHC4Q2M389 1173 aa17.08■□□□□ 0.32
CYB561A3-216ENST00000540755 SLC9C2Q5TAH2 1124 aa17.08■□□□□ 0.32
CYB561A3-216ENST00000540755 OLFM4Q6UX06 510 aa17.08■□□□□ 0.32
CYB561A3-216ENST00000540755 OSBP2Q969R2 916 aa17.08■□□□□ 0.32
CYB561A3-216ENST00000540755 PALD1Q9ULE6 856 aa17.08■□□□□ 0.32
CYB561A3-216ENST00000540755 RBM8AQ9Y5S9 174 aaKnown RBP17.08■□□□□ 0.32
CYB561A3-216ENST00000540755 PDE6AP16499 860 aa17.07■□□□□ 0.32
CYB561A3-216ENST00000540755 SLFNL1Q499Z3 407 aa17.07■□□□□ 0.32
CYB561A3-216ENST00000540755 SOGA3Q5TF21 947 aa17.07■□□□□ 0.32
CYB561A3-216ENST00000540755 CCDC129Q6ZRS4 1044 aa17.07■□□□□ 0.32
CYB561A3-216ENST00000540755 ZNF804AQ7Z570 1209 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms