RNA–Protein interactions for RNA: ENST00000540699.1

ATL3-204, Transcript of atlastin GTPase 3, humanhuman

TSL 3

Gene ATL3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-204ENST00000540699 TNIP1Q15025 636 aa13□□□□□ -0.33
ATL3-204ENST00000540699 CIAPIN1Q6FI81 312 aa13□□□□□ -0.33
ATL3-204ENST00000540699 ERC1Q8IUD2 1116 aa13□□□□□ -0.33
ATL3-204ENST00000540699 TDRD7Q8NHU6 1098 aaKnown RBP13□□□□□ -0.33
ATL3-204ENST00000540699 KCNQ5Q9NR82 932 aa13□□□□□ -0.33
ATL3-204ENST00000540699 HACL1Q9UJ83 578 aa13□□□□□ -0.33
ATL3-204ENST00000540699 CNTNAP1P78357 1384 aa12.99□□□□□ -0.33
ATL3-204ENST00000540699 FAM205AQ6ZU69 1335 aa12.99□□□□□ -0.33
ATL3-204ENST00000540699 A0A1B0GUL7 405 aa12.99□□□□□ -0.33
ATL3-204ENST00000540699 G3V3G9 751 aa12.99□□□□□ -0.33
ATL3-204ENST00000540699 SMARCA5O60264 1052 aaPredicted RBP12.99□□□□□ -0.33
ATL3-204ENST00000540699 RAD17O75943 681 aa12.99□□□□□ -0.33
ATL3-204ENST00000540699 VIL1P09327 827 aaKnown RBP12.99□□□□□ -0.33
ATL3-204ENST00000540699 GYG1P46976 350 aa12.99□□□□□ -0.33
ATL3-204ENST00000540699 OS9Q13438 667 aaPredicted RBP12.99□□□□□ -0.33
ATL3-204ENST00000540699 DCAF8Q5TAQ9 597 aa12.99□□□□□ -0.33
ATL3-204ENST00000540699 STRIP1Q5VSL9 837 aa12.99□□□□□ -0.33
ATL3-204ENST00000540699 LRRCC1Q9C099 1032 aa12.99□□□□□ -0.33
ATL3-204ENST00000540699 PRDM10Q9NQV6 1147 aa12.99□□□□□ -0.33
ATL3-204ENST00000540699 MKRN1Q9UHC7 482 aaKnown RBP12.99□□□□□ -0.33
ATL3-204ENST00000540699 TRPM7Q96QT4 1865 aa12.99□□□□□ -0.33
ATL3-204ENST00000540699 USP17L3A6NCW0 530 aa12.98□□□□□ -0.33
ATL3-204ENST00000540699 USP17L4A6NCW7 530 aa12.98□□□□□ -0.33
ATL3-204ENST00000540699 PSMD14O00487 310 aa12.98□□□□□ -0.33
ATL3-204ENST00000540699 ITGBL1O95965 494 aaPredicted RBP12.98□□□□□ -0.33
ATL3-204ENST00000540699 EPHX2P34913 555 aa12.98□□□□□ -0.33
ATL3-204ENST00000540699 TIMM10P62072 90 aa12.98□□□□□ -0.33
ATL3-204ENST00000540699 C8orf34Q49A92 452 aa12.98□□□□□ -0.33
ATL3-204ENST00000540699 EAPPQ56P03 285 aaPredicted RBP12.98□□□□□ -0.33
ATL3-204ENST00000540699 TNNI3KQ59H18 835 aa12.98□□□□□ -0.33
ATL3-204ENST00000540699 CAVIN4Q5BKX8 364 aa12.98□□□□□ -0.33
ATL3-204ENST00000540699 DACT2Q5SW24 774 aa12.98□□□□□ -0.33
ATL3-204ENST00000540699 USP17L1Q7RTZ2 530 aa12.98□□□□□ -0.33
ATL3-204ENST00000540699 PLEKHM2Q8IWE5 1019 aa12.98□□□□□ -0.33
ATL3-204ENST00000540699 GMLQ99445 158 aa12.98□□□□□ -0.33
ATL3-204ENST00000540699 BACH2Q9BYV9 841 aa12.98□□□□□ -0.33
ATL3-204ENST00000540699 FPGT-TNNI3KV9GXZ4 949 aa12.98□□□□□ -0.33
ATL3-204ENST00000540699 APBB1O00213 710 aa12.97□□□□□ -0.33
ATL3-204ENST00000540699 RPS12P25398 132 aaKnown RBP12.97□□□□□ -0.33
ATL3-204ENST00000540699 ADORA1P30542 326 aa12.97□□□□□ -0.33
ATL3-204ENST00000540699 BCAMP50895 628 aa12.97□□□□□ -0.33
ATL3-204ENST00000540699 SCNN1DP51172 638 aa12.97□□□□□ -0.33
ATL3-204ENST00000540699 FKBP1AP62942 108 aaKnown RBP12.97□□□□□ -0.33
ATL3-204ENST00000540699 RSBN1LQ6PCB5 846 aaPredicted RBP12.97□□□□□ -0.33
ATL3-204ENST00000540699 RHPN1Q8TCX5 695 aa12.97□□□□□ -0.33
ATL3-204ENST00000540699 OTUD7AQ8TE49 926 aaPredicted RBP12.97□□□□□ -0.33
ATL3-204ENST00000540699 DPF2Q92785 391 aa12.97□□□□□ -0.33
ATL3-204ENST00000540699 KIF1BPQ96EK5 621 aa12.97□□□□□ -0.33
ATL3-204ENST00000540699 XAGE2Q96GT9 111 aa12.97□□□□□ -0.33
ATL3-204ENST00000540699 GJA3Q9Y6H8 435 aa12.97□□□□□ -0.33
ATL3-204ENST00000540699 MYO3BQ8WXR4 1341 aa12.96□□□□□ -0.33
ATL3-204ENST00000540699 SEMA3EO15041 775 aa12.96□□□□□ -0.33
ATL3-204ENST00000540699 FOXN1O15353 648 aa12.96□□□□□ -0.33
ATL3-204ENST00000540699 PHKA1P46020 1223 aa12.96□□□□□ -0.33
ATL3-204ENST00000540699 GMPSP49915 693 aaPredicted RBP12.96□□□□□ -0.33
ATL3-204ENST00000540699 TTLL5Q6EMB2 1281 aa12.96□□□□□ -0.33
ATL3-204ENST00000540699 PNMA8AQ86V59 439 aaPredicted RBP12.96□□□□□ -0.33
ATL3-204ENST00000540699 AGBL3Q8NEM8 1001 aa12.96□□□□□ -0.33
ATL3-204ENST00000540699 EAF2Q96CJ1 260 aaPredicted RBP12.96□□□□□ -0.33
ATL3-204ENST00000540699 OSBPL3Q9H4L5 887 aa12.96□□□□□ -0.33
ATL3-204ENST00000540699 GPRC5DQ9NZD1 345 aa12.96□□□□□ -0.33
ATL3-204ENST00000540699 COL1A1P02452 1464 aaPredicted RBP12.96□□□□□ -0.34
ATL3-204ENST00000540699 ECM29Q5VYK3 1845 aa12.95□□□□□ -0.34
ATL3-204ENST00000540699 PDS5AQ29RF7 1337 aaKnown RBP12.95□□□□□ -0.34
ATL3-204ENST00000540699 TMEM88BA6NKF7 163 aa12.95□□□□□ -0.34
ATL3-204ENST00000540699 CTCFP49711 727 aaPredicted RBP12.95□□□□□ -0.34
ATL3-204ENST00000540699 GTF2IP78347 998 aa12.95□□□□□ -0.34
ATL3-204ENST00000540699 BMP2KLQ5H9B9 411 aa12.95□□□□□ -0.34
ATL3-204ENST00000540699 CCDC102BQ68D86 513 aa12.95□□□□□ -0.34
ATL3-204ENST00000540699 VPS37DQ86XT2 251 aa12.95□□□□□ -0.34
ATL3-204ENST00000540699 ZBTB47Q9UFB7 747 aaPredicted RBP12.95□□□□□ -0.34
ATL3-204ENST00000540699 DBNLQ9UJU6 430 aaKnown RBP12.95□□□□□ -0.34
ATL3-204ENST00000540699 CLEC11AQ9Y240 323 aa12.95□□□□□ -0.34
ATL3-204ENST00000540699 MYO5AQ9Y4I1 1855 aaKnown RBP12.94□□□□□ -0.34
ATL3-204ENST00000540699 ARID4AP29374 1257 aaPredicted RBP12.94□□□□□ -0.34
ATL3-204ENST00000540699 MMP14P50281 582 aa12.94□□□□□ -0.34
ATL3-204ENST00000540699 CNTROBQ8N137 903 aa12.94□□□□□ -0.34
ATL3-204ENST00000540699 CERS5Q8N5B7 392 aa12.94□□□□□ -0.34
ATL3-204ENST00000540699 ZNF512BQ96KM6 892 aaPredicted RBP12.94□□□□□ -0.34
ATL3-204ENST00000540699 NEUROD6Q96NK8 337 aa12.94□□□□□ -0.34
ATL3-204ENST00000540699 DBNDD2Q9BQY9 259 aa12.94□□□□□ -0.34
ATL3-204ENST00000540699 GNL3LQ9NVN8 582 aaKnown RBP12.94□□□□□ -0.34
ATL3-204ENST00000540699 STAP2Q9UGK3 403 aa12.94□□□□□ -0.34
ATL3-204ENST00000540699 ZBTB12Q9Y330 459 aaPredicted RBP12.94□□□□□ -0.34
ATL3-204ENST00000540699 THSD7BQ9C0I4 1608 aa12.94□□□□□ -0.34
ATL3-204ENST00000540699 DOCK2Q92608 1830 aa12.93□□□□□ -0.34
ATL3-204ENST00000540699 POLR2AP24928 1970 aaKnown RBP12.93□□□□□ -0.34
ATL3-204ENST00000540699 GSPT1P15170 499 aaKnown RBP12.93□□□□□ -0.34
ATL3-204ENST00000540699 EPS15P42566 896 aa12.93□□□□□ -0.34
ATL3-204ENST00000540699 VEGFBP49765 207 aa12.93□□□□□ -0.34
ATL3-204ENST00000540699 PDE1AP54750 535 aa12.93□□□□□ -0.34
ATL3-204ENST00000540699 ZNF280AP59817 542 aaPredicted RBP12.93□□□□□ -0.34
ATL3-204ENST00000540699 MAP1SQ66K74 1059 aaPredicted RBP12.93□□□□□ -0.34
ATL3-204ENST00000540699 CLASRPQ8N2M8 674 aaKnown RBP12.93□□□□□ -0.34
ATL3-204ENST00000540699 AIDAQ96BJ3 306 aa12.93□□□□□ -0.34
ATL3-204ENST00000540699 IL1RAPL2Q9NP60 686 aa12.93□□□□□ -0.34
ATL3-204ENST00000540699 AOX1Q06278 1338 aa12.92□□□□□ -0.34
ATL3-204ENST00000540699 SALL1Q9NSC2 1324 aa12.92□□□□□ -0.34
ATL3-204ENST00000540699 UQCRFS1P1P0C7P4 283 aa12.92□□□□□ -0.34
ATL3-204ENST00000540699 LMOD1P29536 600 aaPredicted RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms