RNA–Protein interactions for RNA: ENST00000540367.5

CPT1A-206, Transcript of carnitine palmitoyltransferase 1A, humanhuman

TSL 1 (best) BASIC

Gene CPT1A, Length 2,496 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1A-206ENST00000540367 KCNH5Q8NCM2 988 aa13.04□□□□□ -0.32
CPT1A-206ENST00000540367 LRRN4CLQ8ND94 238 aa13.04□□□□□ -0.32
CPT1A-206ENST00000540367 CHMP4CQ96CF2 233 aa13.04□□□□□ -0.32
CPT1A-206ENST00000540367 FHOD1Q9Y613 1164 aa13.04□□□□□ -0.32
CPT1A-206ENST00000540367 CAMTA1Q9Y6Y1 1673 aa13.03□□□□□ -0.32
CPT1A-206ENST00000540367 PDIA3P30101 505 aaKnown RBP13.03□□□□□ -0.32
CPT1A-206ENST00000540367 LINC00301Q8NCQ3 95 aa13.03□□□□□ -0.32
CPT1A-206ENST00000540367 MYD88Q99836 296 aa13.03□□□□□ -0.32
CPT1A-206ENST00000540367 METTL22Q9BUU2 404 aaPredicted RBP13.03□□□□□ -0.32
CPT1A-206ENST00000540367 AFDNP55196 1824 aaKnown RBP13.03□□□□□ -0.32
CPT1A-206ENST00000540367 KCNG4Q8TDN1 519 aa13.03□□□□□ -0.32
CPT1A-206ENST00000540367 BBXQ8WY36 941 aaPredicted RBP13.03□□□□□ -0.32
CPT1A-206ENST00000540367 NOL10Q9BSC4 688 aaKnown RBP13.03□□□□□ -0.32
CPT1A-206ENST00000540367 HELLSQ9NRZ9 838 aa13.03□□□□□ -0.32
CPT1A-206ENST00000540367 PHLPP2Q6ZVD8 1323 aa13.03□□□□□ -0.32
CPT1A-206ENST00000540367 E7EWF7 191 aa13.02□□□□□ -0.32
CPT1A-206ENST00000540367 CCP110O43303 1012 aa13.02□□□□□ -0.32
CPT1A-206ENST00000540367 YEATS4O95619 227 aa13.02□□□□□ -0.32
CPT1A-206ENST00000540367 NLRP12P59046 1061 aa13.02□□□□□ -0.32
CPT1A-206ENST00000540367 RABL6Q3YEC7 729 aaPredicted RBP13.02□□□□□ -0.32
CPT1A-206ENST00000540367 ARHGEF25Q86VW2 580 aa13.02□□□□□ -0.32
CPT1A-206ENST00000540367 TIGD1Q96MW7 591 aa13.02□□□□□ -0.32
CPT1A-206ENST00000540367 PNMA6AP0CW24 399 aaPredicted RBP13.02□□□□□ -0.33
CPT1A-206ENST00000540367 FDPSP14324 419 aaKnown RBP13.02□□□□□ -0.33
CPT1A-206ENST00000540367 ETF1P62495 437 aaKnown RBP13.02□□□□□ -0.33
CPT1A-206ENST00000540367 NCAPHQ15003 741 aa13.02□□□□□ -0.33
CPT1A-206ENST00000540367 STK38Q15208 465 aa13.02□□□□□ -0.33
CPT1A-206ENST00000540367 ARHGAP29Q52LW3 1261 aa13.02□□□□□ -0.33
CPT1A-206ENST00000540367 XAGE3Q8WTP9 111 aa13.02□□□□□ -0.33
CPT1A-206ENST00000540367 POLR3EQ9NVU0 708 aa13.02□□□□□ -0.33
CPT1A-206ENST00000540367 CALCOCO1Q9P1Z2 691 aa13.02□□□□□ -0.33
CPT1A-206ENST00000540367 NAP1L2Q9ULW6 460 aaPredicted RBP13.02□□□□□ -0.33
CPT1A-206ENST00000540367 SLC3A2P08195 630 aaKnown RBP13.01□□□□□ -0.33
CPT1A-206ENST00000540367 SF3A1Q15459 793 aaKnown RBP13.01□□□□□ -0.33
CPT1A-206ENST00000540367 CLIC4Q9Y696 253 aa13.01□□□□□ -0.33
CPT1A-206ENST00000540367 TMEM94Q12767 1356 aa13.01□□□□□ -0.33
CPT1A-206ENST00000540367 ERICH4A6NGS2 130 aa13.01□□□□□ -0.33
CPT1A-206ENST00000540367 ATP5J2-PTCD1G3V325 749 aa13.01□□□□□ -0.33
CPT1A-206ENST00000540367 IKBKBO14920 756 aa13.01□□□□□ -0.33
CPT1A-206ENST00000540367 PTCD1O75127 700 aaKnown RBP13.01□□□□□ -0.33
CPT1A-206ENST00000540367 CYP2C19P33261 490 aa13.01□□□□□ -0.33
CPT1A-206ENST00000540367 TICAM2Q86XR7 235 aa13.01□□□□□ -0.33
CPT1A-206ENST00000540367 SYTL4Q96C24 671 aaPredicted RBP13.01□□□□□ -0.33
CPT1A-206ENST00000540367 ARGLU1Q9NWB6 273 aaPredicted RBP13.01□□□□□ -0.33
CPT1A-206ENST00000540367 SPTLC2O15270 562 aa13□□□□□ -0.33
CPT1A-206ENST00000540367 ZRANB2O95218 330 aaKnown RBP eCLIP13□□□□□ -0.33
CPT1A-206ENST00000540367 GTF2E1P29083 439 aaPredicted RBP13□□□□□ -0.33
CPT1A-206ENST00000540367 EVCP57679 992 aa13□□□□□ -0.33
CPT1A-206ENST00000540367 ZMYM1Q5SVZ6 1142 aa13□□□□□ -0.33
CPT1A-206ENST00000540367 COPS6Q7L5N1 327 aa13□□□□□ -0.33
CPT1A-206ENST00000540367 HOMER1Q86YM7 354 aa13□□□□□ -0.33
CPT1A-206ENST00000540367 FBXL16Q8N461 479 aa13□□□□□ -0.33
CPT1A-206ENST00000540367 NFATC2IPQ8NCF5 419 aa13□□□□□ -0.33
CPT1A-206ENST00000540367 TMEM51Q9NW97 253 aa13□□□□□ -0.33
CPT1A-206ENST00000540367 ORC3Q9UBD5 711 aaPredicted RBP13□□□□□ -0.33
CPT1A-206ENST00000540367 SLIT3O75094 1523 aa13□□□□□ -0.33
CPT1A-206ENST00000540367 BIN1O00499 593 aa13□□□□□ -0.33
CPT1A-206ENST00000540367 HSPD1P10809 573 aaKnown RBP13□□□□□ -0.33
CPT1A-206ENST00000540367 PLA2G4AP47712 749 aa13□□□□□ -0.33
CPT1A-206ENST00000540367 FANCCQ00597 558 aa13□□□□□ -0.33
CPT1A-206ENST00000540367 SRRTQ9BXP5 876 aaKnown RBP13□□□□□ -0.33
CPT1A-206ENST00000540367 PAG1Q9NWQ8 432 aa13□□□□□ -0.33
CPT1A-206ENST00000540367 A0A0G2JLW4 131 aa12.99□□□□□ -0.33
CPT1A-206ENST00000540367 GOLIM4O00461 696 aa12.99□□□□□ -0.33
CPT1A-206ENST00000540367 ZNF202O95125 648 aa12.99□□□□□ -0.33
CPT1A-206ENST00000540367 MYSM1Q5VVJ2 828 aa12.99□□□□□ -0.33
CPT1A-206ENST00000540367 ZNF790Q6PG37 636 aa12.99□□□□□ -0.33
CPT1A-206ENST00000540367 BRAPQ7Z569 592 aa12.99□□□□□ -0.33
CPT1A-206ENST00000540367 UBXN4Q92575 508 aa12.99□□□□□ -0.33
CPT1A-206ENST00000540367 FMNL2Q96PY5 1086 aa12.99□□□□□ -0.33
CPT1A-206ENST00000540367 DNAI1Q9UI46 699 aa12.99□□□□□ -0.33
CPT1A-206ENST00000540367 C1orf167Q5SNV9 1468 aa12.99□□□□□ -0.33
CPT1A-206ENST00000540367 ARFGEF2Q9Y6D5 1785 aa12.99□□□□□ -0.33
CPT1A-206ENST00000540367 TRIM65Q6PJ69 517 aa12.99□□□□□ -0.33
CPT1A-206ENST00000540367 TMCO3Q6UWJ1 677 aa12.99□□□□□ -0.33
CPT1A-206ENST00000540367 UBE3BQ7Z3V4 1068 aa12.99□□□□□ -0.33
CPT1A-206ENST00000540367 C8orf76Q96K31 380 aa12.99□□□□□ -0.33
CPT1A-206ENST00000540367 C19orf44Q9H6X5 657 aa12.99□□□□□ -0.33
CPT1A-206ENST00000540367 MAST3O60307 1309 aa12.98□□□□□ -0.33
CPT1A-206ENST00000540367 TADA3O75528 432 aa12.98□□□□□ -0.33
CPT1A-206ENST00000540367 LMOD1P29536 600 aaPredicted RBP12.98□□□□□ -0.33
CPT1A-206ENST00000540367 OTUD7BQ6GQQ9 843 aa12.98□□□□□ -0.33
CPT1A-206ENST00000540367 ANKRD13DQ6ZTN6 518 aa12.98□□□□□ -0.33
CPT1A-206ENST00000540367 CHST3Q7LGC8 479 aa12.98□□□□□ -0.33
CPT1A-206ENST00000540367 HSD3B7Q9H2F3 369 aa12.98□□□□□ -0.33
CPT1A-206ENST00000540367 NLRP2Q9NX02 1062 aa12.98□□□□□ -0.33
CPT1A-206ENST00000540367 SPEF2Q9C093 1822 aa12.98□□□□□ -0.33
CPT1A-206ENST00000540367 SCN11AQ9UI33 1791 aa12.98□□□□□ -0.33
CPT1A-206ENST00000540367 POLR3DP05423 398 aaPredicted RBP12.98□□□□□ -0.33
CPT1A-206ENST00000540367 PFKFB1P16118 471 aa12.98□□□□□ -0.33
CPT1A-206ENST00000540367 IRX5P78411 483 aaPredicted RBP12.98□□□□□ -0.33
CPT1A-206ENST00000540367 AXDND1Q5T1B0 1012 aaPredicted RBP12.98□□□□□ -0.33
CPT1A-206ENST00000540367 GORABQ5T7V8 394 aa12.98□□□□□ -0.33
CPT1A-206ENST00000540367 MNS1Q8NEH6 495 aa12.98□□□□□ -0.33
CPT1A-206ENST00000540367 FBXO18Q8NFZ0 1043 aa12.98□□□□□ -0.33
CPT1A-206ENST00000540367 TMX1Q9H3N1 280 aa12.98□□□□□ -0.33
CPT1A-206ENST00000540367 DDX60Q8IY21 1712 aaKnown RBP12.97□□□□□ -0.33
CPT1A-206ENST00000540367 EFCAB8A8MWE9 144 aa12.97□□□□□ -0.33
CPT1A-206ENST00000540367 CBFA2T2O43439 604 aa12.97□□□□□ -0.33
CPT1A-206ENST00000540367 CMA1P23946 247 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms