RNA–Protein interactions for RNA: ENST00000539945.5

MDH1-215, Transcript of malate dehydrogenase 1, humanhuman

TSL 2 BASIC

Gene MDH1, Length 1,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-215ENST00000539945 LDHAL6AQ6ZMR3 332 aa11.72□□□□□ -0.53
MDH1-215ENST00000539945 A0A1B0GUL7 405 aa11.71□□□□□ -0.53
MDH1-215ENST00000539945 HIP1O00291 1037 aa11.71□□□□□ -0.53
MDH1-215ENST00000539945 SGSM2O43147 1006 aa11.71□□□□□ -0.53
MDH1-215ENST00000539945 TIMM10P62072 90 aa11.71□□□□□ -0.53
MDH1-215ENST00000539945 CCDC152Q4G0S7 254 aa11.71□□□□□ -0.53
MDH1-215ENST00000539945 C6orf132Q5T0Z8 1188 aa11.71□□□□□ -0.53
MDH1-215ENST00000539945 SMIM5Q71RC9 77 aa11.71□□□□□ -0.53
MDH1-215ENST00000539945 AMIGO3Q86WK7 504 aa11.71□□□□□ -0.53
MDH1-215ENST00000539945 TICAM2Q86XR7 235 aa11.71□□□□□ -0.53
MDH1-215ENST00000539945 NEUROD6Q96NK8 337 aa11.71□□□□□ -0.53
MDH1-215ENST00000539945 SETDB2Q96T68 719 aa11.71□□□□□ -0.53
MDH1-215ENST00000539945 HAUS7Q99871 368 aa11.71□□□□□ -0.53
MDH1-215ENST00000539945 NYXQ9GZU5 481 aa11.71□□□□□ -0.53
MDH1-215ENST00000539945 BOLA2Q9H3K6 86 aa11.71□□□□□ -0.53
MDH1-215ENST00000539945 EMILIN3Q9NT22 766 aa11.71□□□□□ -0.53
MDH1-215ENST00000539945 SRP68Q9UHB9 627 aaKnown RBP11.71□□□□□ -0.53
MDH1-215ENST00000539945 LRP5O75197 1615 aa11.71□□□□□ -0.53
MDH1-215ENST00000539945 COL24A1Q17RW2 1714 aa11.71□□□□□ -0.54
MDH1-215ENST00000539945 RIC1Q4ADV7 1423 aa11.7□□□□□ -0.54
MDH1-215ENST00000539945 RFC4P35249 363 aa11.7□□□□□ -0.54
MDH1-215ENST00000539945 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.7□□□□□ -0.54
MDH1-215ENST00000539945 RUFY2Q8WXA3 655 aa11.7□□□□□ -0.54
MDH1-215ENST00000539945 SNX21Q969T3 373 aa11.7□□□□□ -0.54
MDH1-215ENST00000539945 TBC1D2Q9BYX2 928 aa11.7□□□□□ -0.54
MDH1-215ENST00000539945 CNNM1Q9NRU3 951 aa11.7□□□□□ -0.54
MDH1-215ENST00000539945 DIAPH3Q9NSV4 1193 aa11.7□□□□□ -0.54
MDH1-215ENST00000539945 MROH5Q6ZUA9 1318 aa11.7□□□□□ -0.54
MDH1-215ENST00000539945 C4AP0C0L4 1744 aa11.7□□□□□ -0.54
MDH1-215ENST00000539945 SLC4A3P48751 1232 aa11.69□□□□□ -0.54
MDH1-215ENST00000539945 SF3B3Q15393 1217 aaKnown RBP11.69□□□□□ -0.54
MDH1-215ENST00000539945 ERFEQ4G0M1 354 aa11.69□□□□□ -0.54
MDH1-215ENST00000539945 METTL24Q5JXM2 366 aa11.69□□□□□ -0.54
MDH1-215ENST00000539945 ERICH6Q7L0X2 663 aa11.69□□□□□ -0.54
MDH1-215ENST00000539945 VGLL2Q8N8G2 317 aa11.69□□□□□ -0.54
MDH1-215ENST00000539945 RFX7Q2KHR2 1363 aa11.69□□□□□ -0.54
MDH1-215ENST00000539945 UBR3Q6ZT12 1888 aa11.69□□□□□ -0.54
MDH1-215ENST00000539945 PLSCR1O15162 318 aa11.69□□□□□ -0.54
MDH1-215ENST00000539945 PDE8BO95263 885 aa11.69□□□□□ -0.54
MDH1-215ENST00000539945 RABEP1Q15276 862 aa11.69□□□□□ -0.54
MDH1-215ENST00000539945 ATP2B3Q16720 1220 aa11.69□□□□□ -0.54
MDH1-215ENST00000539945 TXNRD1Q16881 649 aa11.69□□□□□ -0.54
MDH1-215ENST00000539945 CWC27Q6UX04 472 aaKnown RBP11.69□□□□□ -0.54
MDH1-215ENST00000539945 BICDL1Q6ZP65 573 aa11.69□□□□□ -0.54
MDH1-215ENST00000539945 NBPF5PQ86XG9 351 aaPredicted RBP11.69□□□□□ -0.54
MDH1-215ENST00000539945 FBXO41Q8TF61 875 aa11.69□□□□□ -0.54
MDH1-215ENST00000539945 IL17RAQ96F46 866 aa11.69□□□□□ -0.54
MDH1-215ENST00000539945 IL25Q9H293 177 aa11.69□□□□□ -0.54
MDH1-215ENST00000539945 ANO2Q9NQ90 1003 aa11.69□□□□□ -0.54
MDH1-215ENST00000539945 SNRKQ9NRH2 765 aa11.69□□□□□ -0.54
MDH1-215ENST00000539945 ABCC12Q96J65 1359 aa11.68□□□□□ -0.54
MDH1-215ENST00000539945 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.68□□□□□ -0.54
MDH1-215ENST00000539945 MCCP23508 829 aa11.68□□□□□ -0.54
MDH1-215ENST00000539945 SSFA2P28290 1259 aa11.68□□□□□ -0.54
MDH1-215ENST00000539945 GTF2E1P29083 439 aaPredicted RBP11.68□□□□□ -0.54
MDH1-215ENST00000539945 ANAPC15P60006 121 aa11.68□□□□□ -0.54
MDH1-215ENST00000539945 CCDC158Q5M9N0 1113 aa11.68□□□□□ -0.54
MDH1-215ENST00000539945 TPTE2Q6XPS3 522 aa11.68□□□□□ -0.54
MDH1-215ENST00000539945 XAGE2Q96GT9 111 aa11.68□□□□□ -0.54
MDH1-215ENST00000539945 FSD1Q9BTV5 496 aa11.68□□□□□ -0.54
MDH1-215ENST00000539945 SEC31BQ9NQW1 1179 aa11.68□□□□□ -0.54
MDH1-215ENST00000539945 RAD50Q92878 1312 aa11.67□□□□□ -0.54
MDH1-215ENST00000539945 NRG2O14511 850 aaPredicted RBP11.67□□□□□ -0.54
MDH1-215ENST00000539945 ADORA1P30542 326 aa11.67□□□□□ -0.54
MDH1-215ENST00000539945 IGHMBP2P38935 993 aaKnown RBP11.67□□□□□ -0.54
MDH1-215ENST00000539945 GORABQ5T7V8 394 aa11.67□□□□□ -0.54
MDH1-215ENST00000539945 KIAA1211Q6ZU35 1233 aa11.67□□□□□ -0.54
MDH1-215ENST00000539945 ZNF512BQ96KM6 892 aaPredicted RBP11.67□□□□□ -0.54
MDH1-215ENST00000539945 CDC5LQ99459 802 aaKnown RBP11.67□□□□□ -0.54
MDH1-215ENST00000539945 MPHOSPH8Q99549 860 aa11.67□□□□□ -0.54
MDH1-215ENST00000539945 LSG1Q9H089 658 aaKnown RBP11.67□□□□□ -0.54
MDH1-215ENST00000539945 RGS17Q9UGC6 210 aaPredicted RBP11.67□□□□□ -0.54
MDH1-215ENST00000539945 SPEF2Q9C093 1822 aa11.66□□□□□ -0.54
MDH1-215ENST00000539945 IFIT1P09914 478 aaKnown RBP11.66□□□□□ -0.54
MDH1-215ENST00000539945 FGFR2P21802 821 aa11.66□□□□□ -0.54
MDH1-215ENST00000539945 NMIQ13287 307 aaPredicted RBP11.66□□□□□ -0.54
MDH1-215ENST00000539945 PUM3Q15397 648 aaKnown RBP11.66□□□□□ -0.54
MDH1-215ENST00000539945 PACS2Q86VP3 889 aa11.66□□□□□ -0.54
MDH1-215ENST00000539945 HSCBQ8IWL3 235 aa11.66□□□□□ -0.54
MDH1-215ENST00000539945 KBTBD3Q8NAB2 608 aa11.66□□□□□ -0.54
MDH1-215ENST00000539945 IL27Q8NEV9 243 aa11.66□□□□□ -0.54
MDH1-215ENST00000539945 LPIN2Q92539 896 aa11.66□□□□□ -0.54
MDH1-215ENST00000539945 EDC3Q96F86 508 aaKnown RBP11.66□□□□□ -0.54
MDH1-215ENST00000539945 DNAJC2Q99543 621 aaKnown RBP11.66□□□□□ -0.54
MDH1-215ENST00000539945 PAG1Q9NWQ8 432 aa11.66□□□□□ -0.54
MDH1-215ENST00000539945 CARMIL3Q8ND23 1372 aa11.66□□□□□ -0.54
MDH1-215ENST00000539945 GTPBP6O43824 516 aaPredicted RBP11.65□□□□□ -0.54
MDH1-215ENST00000539945 APBA3O96018 575 aa11.65□□□□□ -0.54
MDH1-215ENST00000539945 HSPA4P34932 840 aa11.65□□□□□ -0.54
MDH1-215ENST00000539945 PPP4CP60510 307 aa11.65□□□□□ -0.54
MDH1-215ENST00000539945 NFIXQ14938 502 aa11.65□□□□□ -0.54
MDH1-215ENST00000539945 TTC39AQ5SRH9 613 aa11.65□□□□□ -0.54
MDH1-215ENST00000539945 FAM227BQ96M60 508 aa11.65□□□□□ -0.54
MDH1-215ENST00000539945 NLRP3Q96P20 1036 aa11.65□□□□□ -0.54
MDH1-215ENST00000539945 GOLIM4O00461 696 aa11.64□□□□□ -0.55
MDH1-215ENST00000539945 GYS1P13807 737 aa11.64□□□□□ -0.55
MDH1-215ENST00000539945 DDX46Q7L014 1031 aaKnown RBP11.64□□□□□ -0.55
MDH1-215ENST00000539945 ANKRD18AQ8IVF6 992 aa11.64□□□□□ -0.55
MDH1-215ENST00000539945 BSDC1Q9NW68 430 aaPredicted RBP11.64□□□□□ -0.55
MDH1-215ENST00000539945 NDUFB9Q9Y6M9 179 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms