RNA–Protein interactions for RNA: ENST00000539661.5

RAB40C-205, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RAB40C, Length 2,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-205ENST00000539661 MYO1BO43795 1136 aa20.39■□□□□ 0.85
RAB40C-205ENST00000539661 FANCCQ00597 558 aa20.39■□□□□ 0.85
RAB40C-205ENST00000539661 NEXNQ0ZGT2 675 aa20.39■□□□□ 0.85
RAB40C-205ENST00000539661 SF3A1Q15459 793 aaKnown RBP20.39■□□□□ 0.85
RAB40C-205ENST00000539661 FBXW7Q969H0 707 aa20.39■□□□□ 0.85
RAB40C-205ENST00000539661 LRRC59Q96AG4 307 aaKnown RBP20.39■□□□□ 0.85
RAB40C-205ENST00000539661 PALLDQ8WX93 1383 aa20.39■□□□□ 0.85
RAB40C-205ENST00000539661 PDIA3P30101 505 aaKnown RBP20.39■□□□□ 0.85
RAB40C-205ENST00000539661 KBTBD3Q8NAB2 608 aa20.39■□□□□ 0.85
RAB40C-205ENST00000539661 KLHDC4Q8TBB5 520 aa20.39■□□□□ 0.85
RAB40C-205ENST00000539661 SEC62Q99442 399 aaKnown RBP20.39■□□□□ 0.85
RAB40C-205ENST00000539661 PHF8Q9UPP1 1060 aa20.39■□□□□ 0.85
RAB40C-205ENST00000539661 NFAT5O94916 1531 aa20.38■□□□□ 0.85
RAB40C-205ENST00000539661 PHRF1Q9P1Y6 1649 aaKnown RBP20.38■□□□□ 0.85
RAB40C-205ENST00000539661 CCT2P78371 535 aaKnown RBP20.38■□□□□ 0.85
RAB40C-205ENST00000539661 MUM1L1Q5H9M0 696 aa20.38■□□□□ 0.85
RAB40C-205ENST00000539661 NEURL1BA8MQ27 555 aa20.38■□□□□ 0.85
RAB40C-205ENST00000539661 ZSCAN12O43309 604 aa20.38■□□□□ 0.85
RAB40C-205ENST00000539661 C1orf141Q5JVX7 400 aa20.38■□□□□ 0.85
RAB40C-205ENST00000539661 BRAPQ7Z569 592 aa20.38■□□□□ 0.85
RAB40C-205ENST00000539661 SIPA1L3O60292 1781 aaPredicted RBP20.38■□□□□ 0.85
RAB40C-205ENST00000539661 EVCP57679 992 aa20.37■□□□□ 0.85
RAB40C-205ENST00000539661 GCKRQ14397 625 aa20.37■□□□□ 0.85
RAB40C-205ENST00000539661 MPHOSPH8Q99549 860 aa20.37■□□□□ 0.85
RAB40C-205ENST00000539661 LMTK3Q96Q04 1460 aa20.37■□□□□ 0.85
RAB40C-205ENST00000539661 SPTLC2O15270 562 aa20.37■□□□□ 0.85
RAB40C-205ENST00000539661 RIC3Q7Z5B4 369 aa20.37■□□□□ 0.85
RAB40C-205ENST00000539661 RGS22Q8NE09 1264 aa20.37■□□□□ 0.85
RAB40C-205ENST00000539661 ZNF202O95125 648 aa20.36■□□□□ 0.85
RAB40C-205ENST00000539661 RFX5P48382 616 aaPredicted RBP20.36■□□□□ 0.85
RAB40C-205ENST00000539661 TFCP2Q12800 502 aa20.36■□□□□ 0.85
RAB40C-205ENST00000539661 GOLGA6L9A6NEM1 432 aa20.36■□□□□ 0.85
RAB40C-205ENST00000539661 GUCY1B3Q02153 619 aa20.36■□□□□ 0.85
RAB40C-205ENST00000539661 GPS2Q13227 327 aa20.36■□□□□ 0.85
RAB40C-205ENST00000539661 PDIA6Q15084 440 aa20.36■□□□□ 0.85
RAB40C-205ENST00000539661 REXO1L1PQ8IX06 675 aa20.36■□□□□ 0.85
RAB40C-205ENST00000539661 NCOA5Q9HCD5 579 aaKnown RBP20.36■□□□□ 0.85
RAB40C-205ENST00000539661 PARP3Q9Y6F1 533 aa20.36■□□□□ 0.85
RAB40C-205ENST00000539661 E7EWF7 191 aa20.35■□□□□ 0.85
RAB40C-205ENST00000539661 URI1O94763 535 aaPredicted RBP20.35■□□□□ 0.85
RAB40C-205ENST00000539661 FDPSP14324 419 aaKnown RBP20.35■□□□□ 0.85
RAB40C-205ENST00000539661 CAPN2P17655 700 aa20.35■□□□□ 0.85
RAB40C-205ENST00000539661 CMA1P23946 247 aa20.35■□□□□ 0.85
RAB40C-205ENST00000539661 GORABQ5T7V8 394 aa20.35■□□□□ 0.85
RAB40C-205ENST00000539661 GPR161Q8N6U8 529 aaKnown RBP20.35■□□□□ 0.85
RAB40C-205ENST00000539661 SYTL4Q96C24 671 aaPredicted RBP20.35■□□□□ 0.85
RAB40C-205ENST00000539661 PTPN12Q05209 780 aaKnown RBP20.35■□□□□ 0.85
RAB40C-205ENST00000539661 EPHA10Q5JZY3 1008 aa20.35■□□□□ 0.85
RAB40C-205ENST00000539661 CLIC4Q9Y696 253 aa20.35■□□□□ 0.85
RAB40C-205ENST00000539661 RGPD2P0DJD1 1756 aa20.34■□□□□ 0.85
RAB40C-205ENST00000539661 AIMP1Q12904 312 aaKnown RBP20.34■□□□□ 0.85
RAB40C-205ENST00000539661 CARD6Q9BX69 1037 aa20.34■□□□□ 0.85
RAB40C-205ENST00000539661 TUBE1Q9UJT0 475 aa20.34■□□□□ 0.85
RAB40C-205ENST00000539661 LMOD1P29536 600 aaPredicted RBP20.33■□□□□ 0.85
RAB40C-205ENST00000539661 UBASH3AP57075 661 aa20.33■□□□□ 0.85
RAB40C-205ENST00000539661 RABL6Q3YEC7 729 aaPredicted RBP20.33■□□□□ 0.85
RAB40C-205ENST00000539661 MYSM1Q5VVJ2 828 aa20.33■□□□□ 0.85
RAB40C-205ENST00000539661 FMNL2Q96PY5 1086 aa20.33■□□□□ 0.85
RAB40C-205ENST00000539661 DBNDD2Q9BQY9 259 aa20.33■□□□□ 0.85
RAB40C-205ENST00000539661 METTL22Q9BUU2 404 aaPredicted RBP20.33■□□□□ 0.85
RAB40C-205ENST00000539661 HSD3B7Q9H2F3 369 aa20.33■□□□□ 0.85
RAB40C-205ENST00000539661 PRAMEF22A3QJZ6 481 aa20.33■□□□□ 0.84
RAB40C-205ENST00000539661 ARHGAP6O43182 974 aa20.33■□□□□ 0.84
RAB40C-205ENST00000539661 DDX46Q7L014 1031 aaKnown RBP20.33■□□□□ 0.84
RAB40C-205ENST00000539661 VSTM4Q8IW00 320 aa20.33■□□□□ 0.84
RAB40C-205ENST00000539661 C8orf76Q96K31 380 aa20.33■□□□□ 0.84
RAB40C-205ENST00000539661 PXDNQ92626 1479 aa20.33■□□□□ 0.84
RAB40C-205ENST00000539661 DHX16O60231 1041 aaKnown RBP20.32■□□□□ 0.84
RAB40C-205ENST00000539661 TBC1D8O95759 1140 aa20.32■□□□□ 0.84
RAB40C-205ENST00000539661 MYL5Q02045 173 aa20.32■□□□□ 0.84
RAB40C-205ENST00000539661 CC2D1AQ6P1N0 951 aaPredicted RBP20.32■□□□□ 0.84
RAB40C-205ENST00000539661 ADAMTS7Q9UKP4 1686 aa20.32■□□□□ 0.84
RAB40C-205ENST00000539661 BIN1O00499 593 aa20.32■□□□□ 0.84
RAB40C-205ENST00000539661 ZMYM1Q5SVZ6 1142 aa20.32■□□□□ 0.84
RAB40C-205ENST00000539661 AXDND1Q5T1B0 1012 aaPredicted RBP20.32■□□□□ 0.84
RAB40C-205ENST00000539661 FBXO18Q8NFZ0 1043 aa20.32■□□□□ 0.84
RAB40C-205ENST00000539661 NAP1L2Q9ULW6 460 aaPredicted RBP20.32■□□□□ 0.84
RAB40C-205ENST00000539661 CHGBP05060 677 aa20.31■□□□□ 0.84
RAB40C-205ENST00000539661 PFKFB1P16118 471 aa20.31■□□□□ 0.84
RAB40C-205ENST00000539661 MAP3K9P80192 1104 aa20.31■□□□□ 0.84
RAB40C-205ENST00000539661 SYNE3Q6ZMZ3 975 aa20.31■□□□□ 0.84
RAB40C-205ENST00000539661 NDUFB9Q9Y6M9 179 aa20.31■□□□□ 0.84
RAB40C-205ENST00000539661 POLR3GO15318 223 aaPredicted RBP20.31■□□□□ 0.84
RAB40C-205ENST00000539661 RAD51AP2Q09MP3 1159 aa20.31■□□□□ 0.84
RAB40C-205ENST00000539661 JAKMIP3Q5VZ66 844 aa20.31■□□□□ 0.84
RAB40C-205ENST00000539661 KCNH5Q8NCM2 988 aa20.31■□□□□ 0.84
RAB40C-205ENST00000539661 UTP14AQ9BVJ6 771 aaKnown RBP20.31■□□□□ 0.84
RAB40C-205ENST00000539661 FANCGO15287 622 aa20.3■□□□□ 0.84
RAB40C-205ENST00000539661 SERPINC1P01008 464 aa20.3■□□□□ 0.84
RAB40C-205ENST00000539661 ANO1Q5XXA6 986 aa20.3■□□□□ 0.84
RAB40C-205ENST00000539661 VWA3AA6NCI4 1184 aa20.3■□□□□ 0.84
RAB40C-205ENST00000539661 HSPD1P10809 573 aaKnown RBP20.3■□□□□ 0.84
RAB40C-205ENST00000539661 TOP1P11387 765 aaKnown RBP20.3■□□□□ 0.84
RAB40C-205ENST00000539661 ATP1A3P13637 1013 aa20.3■□□□□ 0.84
RAB40C-205ENST00000539661 OAS2P29728 719 aaKnown RBP20.3■□□□□ 0.84
RAB40C-205ENST00000539661 SMC1AQ14683 1233 aaKnown RBP20.3■□□□□ 0.84
RAB40C-205ENST00000539661 ARFGAP3Q9NP61 516 aa20.3■□□□□ 0.84
RAB40C-205ENST00000539661 PSD3Q9NYI0 1048 aa20.3■□□□□ 0.84
RAB40C-205ENST00000539661 SEC31AO94979 1220 aaKnown RBP20.29■□□□□ 0.84
RAB40C-205ENST00000539661 CASQ1P31415 396 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms