RNA–Protein interactions for RNA: ENST00000539492.1

CD4-209, Transcript of CD4 molecule, humanhuman

TSL 4

Gene CD4, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-209ENST00000539492 FKTNO75072 461 aa10.34□□□□□ -0.75
CD4-209ENST00000539492 ALDH1A1P00352 501 aa10.34□□□□□ -0.75
CD4-209ENST00000539492 FKBP1AP62942 108 aaKnown RBP10.34□□□□□ -0.75
CD4-209ENST00000539492 IFIT5Q13325 482 aaKnown RBP10.34□□□□□ -0.75
CD4-209ENST00000539492 PRKG1Q13976 671 aa10.34□□□□□ -0.75
CD4-209ENST00000539492 MAP3K11Q16584 847 aa10.34□□□□□ -0.75
CD4-209ENST00000539492 CCDC184Q52MB2 194 aa10.34□□□□□ -0.75
CD4-209ENST00000539492 PRPF38BQ5VTL8 546 aaKnown RBP10.34□□□□□ -0.75
CD4-209ENST00000539492 FBXO46Q6PJ61 603 aaPredicted RBP10.34□□□□□ -0.75
CD4-209ENST00000539492 ZNF804AQ7Z570 1209 aa10.34□□□□□ -0.75
CD4-209ENST00000539492 CERS5Q8N5B7 392 aa10.34□□□□□ -0.75
CD4-209ENST00000539492 DEFB129Q9H1M3 183 aa10.34□□□□□ -0.75
CD4-209ENST00000539492 MYH13Q9UKX3 1938 aa10.34□□□□□ -0.75
CD4-209ENST00000539492 SSC5DA1L4H1 1573 aa10.34□□□□□ -0.75
CD4-209ENST00000539492 MANSC4A6NHS7 340 aaPredicted RBP10.33□□□□□ -0.76
CD4-209ENST00000539492 UNCXA6NJT0 531 aa10.33□□□□□ -0.76
CD4-209ENST00000539492 MYO1BO43795 1136 aa10.33□□□□□ -0.76
CD4-209ENST00000539492 PPP1R12BO60237 982 aaPredicted RBP10.33□□□□□ -0.76
CD4-209ENST00000539492 TAF5LO75529 589 aa10.33□□□□□ -0.76
CD4-209ENST00000539492 ZBTB48P10074 688 aaPredicted RBP10.33□□□□□ -0.76
CD4-209ENST00000539492 IL1R1P14778 569 aa10.33□□□□□ -0.76
CD4-209ENST00000539492 FOXO4P98177 505 aa10.33□□□□□ -0.76
CD4-209ENST00000539492 PCDH10Q9P2E7 1040 aa10.33□□□□□ -0.76
CD4-209ENST00000539492 CHMP3Q9Y3E7 222 aa10.33□□□□□ -0.76
CD4-209ENST00000539492 BRCA2P51587 3418 aa10.33□□□□□ -0.76
CD4-209ENST00000539492 SPDYE2BA6NHP3 402 aa10.32□□□□□ -0.76
CD4-209ENST00000539492 SNAP23O00161 211 aa10.32□□□□□ -0.76
CD4-209ENST00000539492 VAMP4O75379 141 aa10.32□□□□□ -0.76
CD4-209ENST00000539492 SPDYE6P0CI01 402 aa10.32□□□□□ -0.76
CD4-209ENST00000539492 INHBEP58166 350 aa10.32□□□□□ -0.76
CD4-209ENST00000539492 SUPT20HL1Q3ZLR7 823 aa10.32□□□□□ -0.76
CD4-209ENST00000539492 CFAP100Q494V2 611 aa10.32□□□□□ -0.76
CD4-209ENST00000539492 BEND3Q5T5X7 828 aa10.32□□□□□ -0.76
CD4-209ENST00000539492 HELBQ8NG08 1087 aaPredicted RBP10.32□□□□□ -0.76
CD4-209ENST00000539492 SLC10A4Q96EP9 437 aa10.32□□□□□ -0.76
CD4-209ENST00000539492 WNK4Q96J92 1243 aa10.32□□□□□ -0.76
CD4-209ENST00000539492 R3HDMLQ9H3Y0 253 aa10.32□□□□□ -0.76
CD4-209ENST00000539492 AK9Q5TCS8 1911 aa10.32□□□□□ -0.76
CD4-209ENST00000539492 CLRN2A0PK11 232 aa10.31□□□□□ -0.76
CD4-209ENST00000539492 F6X3S4 739 aa10.31□□□□□ -0.76
CD4-209ENST00000539492 F8W031 263 aaPredicted RBP10.31□□□□□ -0.76
CD4-209ENST00000539492 IREB2P48200 963 aaKnown RBP10.31□□□□□ -0.76
CD4-209ENST00000539492 EXOSC9Q06265 439 aaKnown RBP10.31□□□□□ -0.76
CD4-209ENST00000539492 TAF7LQ5H9L4 462 aa10.31□□□□□ -0.76
CD4-209ENST00000539492 LMBR1LQ6UX01 489 aa10.31□□□□□ -0.76
CD4-209ENST00000539492 IFNL1Q8IU54 200 aa10.31□□□□□ -0.76
CD4-209ENST00000539492 WDR63Q8IWG1 891 aa10.31□□□□□ -0.76
CD4-209ENST00000539492 CLMNQ96JQ2 1002 aa10.31□□□□□ -0.76
CD4-209ENST00000539492 VEZTQ9HBM0 779 aa10.31□□□□□ -0.76
CD4-209ENST00000539492 FZD1Q9UP38 647 aa10.31□□□□□ -0.76
CD4-209ENST00000539492 PCDHAC2Q9Y5I4 1007 aa10.31□□□□□ -0.76
CD4-209ENST00000539492 GRM8O00222 908 aa10.3□□□□□ -0.76
CD4-209ENST00000539492 TNFAIP1Q13829 316 aa10.3□□□□□ -0.76
CD4-209ENST00000539492 CCDC57Q2TAC2 916 aa10.3□□□□□ -0.76
CD4-209ENST00000539492 LDHAL6AQ6ZMR3 332 aa10.3□□□□□ -0.76
CD4-209ENST00000539492 PRMT6Q96LA8 375 aaPredicted RBP10.3□□□□□ -0.76
CD4-209ENST00000539492 MRS2Q9HD23 443 aa10.3□□□□□ -0.76
CD4-209ENST00000539492 CNNM1Q9NRU3 951 aa10.3□□□□□ -0.76
CD4-209ENST00000539492 AOX1Q06278 1338 aa10.3□□□□□ -0.76
CD4-209ENST00000539492 FAM205AQ6ZU69 1335 aa10.3□□□□□ -0.76
CD4-209ENST00000539492 IGF2BP3O00425 579 aaKnown RBP eCLIP10.29□□□□□ -0.76
CD4-209ENST00000539492 ALDH1L1O75891 902 aa10.29□□□□□ -0.76
CD4-209ENST00000539492 RBM5P52756 815 aaKnown RBP eCLIP10.29□□□□□ -0.76
CD4-209ENST00000539492 UBE4AQ14139 1066 aa10.29□□□□□ -0.76
CD4-209ENST00000539492 EPHA10Q5JZY3 1008 aa10.29□□□□□ -0.76
CD4-209ENST00000539492 MFSD14BQ5SR56 506 aa10.29□□□□□ -0.76
CD4-209ENST00000539492 NBPF12Q5TAG4 269 aaPredicted RBP10.29□□□□□ -0.76
CD4-209ENST00000539492 OTUD7BQ6GQQ9 843 aa10.29□□□□□ -0.76
CD4-209ENST00000539492 ANKRD13AQ8IZ07 590 aa10.29□□□□□ -0.76
CD4-209ENST00000539492 ERO1AQ96HE7 468 aa10.29□□□□□ -0.76
CD4-209ENST00000539492 ZNF594Q96JF6 807 aaPredicted RBP10.29□□□□□ -0.76
CD4-209ENST00000539492 JAG2Q9Y219 1238 aa10.29□□□□□ -0.76
CD4-209ENST00000539492 TRIM17Q9Y577 477 aa10.29□□□□□ -0.76
CD4-209ENST00000539492 TRIOBPQ9H2D6 2365 aa10.29□□□□□ -0.76
CD4-209ENST00000539492 PLIN1O60240 522 aa10.28□□□□□ -0.76
CD4-209ENST00000539492 USP2O75604 605 aaPredicted RBP10.28□□□□□ -0.76
CD4-209ENST00000539492 GJA5P36382 358 aa10.28□□□□□ -0.76
CD4-209ENST00000539492 RASA3Q14644 834 aa10.28□□□□□ -0.76
CD4-209ENST00000539492 SPDYE2Q495Y8 402 aa10.28□□□□□ -0.76
CD4-209ENST00000539492 OTOP1Q7RTM1 612 aa10.28□□□□□ -0.76
CD4-209ENST00000539492 TDRD7Q8NHU6 1098 aaKnown RBP10.28□□□□□ -0.76
CD4-209ENST00000539492 C9orf78Q9NZ63 289 aaPredicted RBP10.28□□□□□ -0.76
CD4-209ENST00000539492 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.28□□□□□ -0.76
CD4-209ENST00000539492 SERPINA10Q9UK55 444 aa10.28□□□□□ -0.76
CD4-209ENST00000539492 TTF2Q9UNY4 1162 aaKnown RBP10.28□□□□□ -0.76
CD4-209ENST00000539492 SALL2Q9Y467 1007 aaPredicted RBP10.28□□□□□ -0.76
CD4-209ENST00000539492 TESPA1A2RU30 521 aaPredicted RBP10.27□□□□□ -0.77
CD4-209ENST00000539492 HIBADHP31937 336 aaKnown RBP10.27□□□□□ -0.77
CD4-209ENST00000539492 CRHR2Q13324 411 aa10.27□□□□□ -0.77
CD4-209ENST00000539492 INTS3Q68E01 1043 aaKnown RBP10.27□□□□□ -0.77
CD4-209ENST00000539492 ZNF70Q9UC06 446 aaPredicted RBP10.27□□□□□ -0.77
CD4-209ENST00000539492 GYG1P46976 350 aa10.26□□□□□ -0.77
CD4-209ENST00000539492 DZIP1LQ8IYY4 767 aaKnown RBP10.26□□□□□ -0.77
CD4-209ENST00000539492 CD99L2Q8TCZ2 262 aa10.26□□□□□ -0.77
CD4-209ENST00000539492 FAM84BQ96KN1 310 aaPredicted RBP10.26□□□□□ -0.77
CD4-209ENST00000539492 SRCIN1Q9C0H9 1055 aa10.26□□□□□ -0.77
CD4-209ENST00000539492 SPINK5Q9NQ38 1064 aaPredicted RBP10.26□□□□□ -0.77
CD4-209ENST00000539492 MROH5Q6ZUA9 1318 aa10.26□□□□□ -0.77
CD4-209ENST00000539492 CRKP46108 304 aa10.25□□□□□ -0.77
CD4-209ENST00000539492 TNNI2P48788 182 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms