RNA–Protein interactions for RNA: ENST00000539372.5

TNFRSF1A-212, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,063 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-212ENST00000539372 MMP14P50281 582 aa23.94■■□□□ 1.42
TNFRSF1A-212ENST00000539372 ZNF157P51786 506 aaPredicted RBP23.93■■□□□ 1.42
TNFRSF1A-212ENST00000539372 RARSP54136 660 aaKnown RBP23.93■■□□□ 1.42
TNFRSF1A-212ENST00000539372 METTL24Q5JXM2 366 aa23.93■■□□□ 1.42
TNFRSF1A-212ENST00000539372 TSKSQ9UJT2 592 aa23.93■■□□□ 1.42
TNFRSF1A-212ENST00000539372 HIBADHP31937 336 aaKnown RBP23.92■■□□□ 1.42
TNFRSF1A-212ENST00000539372 NOGQ13253 232 aa23.92■■□□□ 1.42
TNFRSF1A-212ENST00000539372 DIEXFQ68CQ4 756 aaKnown RBP23.92■■□□□ 1.42
TNFRSF1A-212ENST00000539372 ZBED3Q96IU2 234 aaPredicted RBP23.92■■□□□ 1.42
TNFRSF1A-212ENST00000539372 FAM155AB1AL88 458 aaPredicted RBP23.91■■□□□ 1.42
TNFRSF1A-212ENST00000539372 BRPF1P55201 1214 aaPredicted RBP23.91■■□□□ 1.42
TNFRSF1A-212ENST00000539372 DLGAP5Q15398 846 aa23.91■■□□□ 1.42
TNFRSF1A-212ENST00000539372 FAM84BQ96KN1 310 aaPredicted RBP23.91■■□□□ 1.42
TNFRSF1A-212ENST00000539372 API5Q9BZZ5 524 aaKnown RBP23.91■■□□□ 1.42
TNFRSF1A-212ENST00000539372 PCDHAC2Q9Y5I4 1007 aa23.91■■□□□ 1.42
TNFRSF1A-212ENST00000539372 MOB2Q70IA6 237 aa23.9■■□□□ 1.42
TNFRSF1A-212ENST00000539372 TDRD7Q8NHU6 1098 aaKnown RBP23.9■■□□□ 1.42
TNFRSF1A-212ENST00000539372 UBTFL1P0CB47 393 aaPredicted RBP23.89■■□□□ 1.41
TNFRSF1A-212ENST00000539372 FKBP1AP62942 108 aaKnown RBP23.89■■□□□ 1.41
TNFRSF1A-212ENST00000539372 VGLL2Q8N8G2 317 aa23.89■■□□□ 1.41
TNFRSF1A-212ENST00000539372 CCDC102AQ96A19 550 aa23.89■■□□□ 1.41
TNFRSF1A-212ENST00000539372 RFX5P48382 616 aaPredicted RBP23.88■■□□□ 1.41
TNFRSF1A-212ENST00000539372 CFAP100Q494V2 611 aa23.88■■□□□ 1.41
TNFRSF1A-212ENST00000539372 VPS37DQ86XT2 251 aa23.88■■□□□ 1.41
TNFRSF1A-212ENST00000539372 APOBEC3FQ8IUX4 373 aaKnown RBP23.88■■□□□ 1.41
TNFRSF1A-212ENST00000539372 IQSEC3Q9UPP2 1182 aaPredicted RBP23.88■■□□□ 1.41
TNFRSF1A-212ENST00000539372 FAM205AQ6ZU69 1335 aa23.87■■□□□ 1.41
TNFRSF1A-212ENST00000539372 PDE8BO95263 885 aa23.87■■□□□ 1.41
TNFRSF1A-212ENST00000539372 FKBP1BP68106 108 aa23.87■■□□□ 1.41
TNFRSF1A-212ENST00000539372 TTLL12Q14166 644 aaPredicted RBP23.87■■□□□ 1.41
TNFRSF1A-212ENST00000539372 MFSD14BQ5SR56 506 aa23.87■■□□□ 1.41
TNFRSF1A-212ENST00000539372 PAPPA2Q9BXP8 1791 aa23.87■■□□□ 1.41
TNFRSF1A-212ENST00000539372 UBE2Q2LH0YL09 131 aa23.86■■□□□ 1.41
TNFRSF1A-212ENST00000539372 SLC10A3P09131 477 aa23.86■■□□□ 1.41
TNFRSF1A-212ENST00000539372 RBM5P52756 815 aaKnown RBP eCLIP23.86■■□□□ 1.41
TNFRSF1A-212ENST00000539372 KIF23Q02241 960 aaPredicted RBP23.86■■□□□ 1.41
TNFRSF1A-212ENST00000539372 FBXO33Q7Z6M2 555 aa23.86■■□□□ 1.41
TNFRSF1A-212ENST00000539372 MTMR14Q8NCE2 650 aa23.86■■□□□ 1.41
TNFRSF1A-212ENST00000539372 LRRFIP2Q9Y608 721 aaKnown RBP23.86■■□□□ 1.41
TNFRSF1A-212ENST00000539372 KIF16BQ96L93 1317 aa23.85■■□□□ 1.41
TNFRSF1A-212ENST00000539372 CLRN2A0PK11 232 aa23.85■■□□□ 1.41
TNFRSF1A-212ENST00000539372 EYA2O00167 538 aa23.85■■□□□ 1.41
TNFRSF1A-212ENST00000539372 NF2P35240 595 aa23.85■■□□□ 1.41
TNFRSF1A-212ENST00000539372 PTPN12Q05209 780 aaKnown RBP23.85■■□□□ 1.41
TNFRSF1A-212ENST00000539372 RASAL3Q86YV0 1011 aa23.85■■□□□ 1.41
TNFRSF1A-212ENST00000539372 PRMT6Q96LA8 375 aaPredicted RBP23.85■■□□□ 1.41
TNFRSF1A-212ENST00000539372 AOX1Q06278 1338 aa23.84■■□□□ 1.41
TNFRSF1A-212ENST00000539372 SPDYE2BA6NHP3 402 aa23.84■■□□□ 1.41
TNFRSF1A-212ENST00000539372 CA12O43570 354 aa23.84■■□□□ 1.41
TNFRSF1A-212ENST00000539372 SPDYE6P0CI01 402 aa23.84■■□□□ 1.41
TNFRSF1A-212ENST00000539372 HNRNPUQ00839 825 aaKnown RBP eCLIP23.84■■□□□ 1.41
TNFRSF1A-212ENST00000539372 CHAF1AQ13111 956 aaPredicted RBP23.84■■□□□ 1.41
TNFRSF1A-212ENST00000539372 PRKG1Q13976 671 aa23.84■■□□□ 1.41
TNFRSF1A-212ENST00000539372 CAVIN4Q5BKX8 364 aa23.84■■□□□ 1.41
TNFRSF1A-212ENST00000539372 MEIS3Q99687 375 aa23.84■■□□□ 1.41
TNFRSF1A-212ENST00000539372 TTF2Q9UNY4 1162 aaKnown RBP23.84■■□□□ 1.41
TNFRSF1A-212ENST00000539372 MYO1BO43795 1136 aa23.83■■□□□ 1.41
TNFRSF1A-212ENST00000539372 BCAMP50895 628 aa23.83■■□□□ 1.41
TNFRSF1A-212ENST00000539372 PUM3Q15397 648 aaKnown RBP23.83■■□□□ 1.41
TNFRSF1A-212ENST00000539372 ARHGAP45Q92619 1136 aa23.83■■□□□ 1.41
TNFRSF1A-212ENST00000539372 SIL1Q9H173 461 aa23.83■■□□□ 1.41
TNFRSF1A-212ENST00000539372 DEFB129Q9H1M3 183 aa23.83■■□□□ 1.41
TNFRSF1A-212ENST00000539372 FRAT2O75474 233 aaPredicted RBP23.82■■□□□ 1.4
TNFRSF1A-212ENST00000539372 BCAR3O75815 825 aa23.82■■□□□ 1.4
TNFRSF1A-212ENST00000539372 VEZTQ9HBM0 779 aa23.82■■□□□ 1.4
TNFRSF1A-212ENST00000539372 IFIT1P09914 478 aaKnown RBP23.81■■□□□ 1.4
TNFRSF1A-212ENST00000539372 FGFR2P21802 821 aa23.81■■□□□ 1.4
TNFRSF1A-212ENST00000539372 GRIK5Q16478 980 aa23.81■■□□□ 1.4
TNFRSF1A-212ENST00000539372 ATG9AQ7Z3C6 839 aa23.81■■□□□ 1.4
TNFRSF1A-212ENST00000539372 INTS3Q68E01 1043 aaKnown RBP23.8■■□□□ 1.4
TNFRSF1A-212ENST00000539372 FRAT1Q92837 279 aaPredicted RBP23.8■■□□□ 1.4
TNFRSF1A-212ENST00000539372 FZD1Q9UP38 647 aa23.8■■□□□ 1.4
TNFRSF1A-212ENST00000539372 TNNQ9UQP3 1299 aa23.8■■□□□ 1.4
TNFRSF1A-212ENST00000539372 SLC5A1P13866 664 aa23.79■■□□□ 1.4
TNFRSF1A-212ENST00000539372 ARMC9Q7Z3E5 817 aa23.79■■□□□ 1.4
TNFRSF1A-212ENST00000539372 CSRNP1Q96S65 589 aa23.79■■□□□ 1.4
TNFRSF1A-212ENST00000539372 PA2G4Q9UQ80 394 aaKnown RBP23.79■■□□□ 1.4
TNFRSF1A-212ENST00000539372 HDAC5Q9UQL6 1122 aa23.79■■□□□ 1.4
TNFRSF1A-212ENST00000539372 COL1A1P02452 1464 aaPredicted RBP23.79■■□□□ 1.4
TNFRSF1A-212ENST00000539372 IPO8O15397 1037 aaKnown RBP23.78■■□□□ 1.4
TNFRSF1A-212ENST00000539372 TRIM27P14373 513 aa23.78■■□□□ 1.4
TNFRSF1A-212ENST00000539372 LPIN2Q92539 896 aa23.78■■□□□ 1.4
TNFRSF1A-212ENST00000539372 SERPINA10Q9UK55 444 aa23.78■■□□□ 1.4
TNFRSF1A-212ENST00000539372 ARAP2Q8WZ64 1704 aa23.77■■□□□ 1.4
TNFRSF1A-212ENST00000539372 CIAO1O76071 339 aa23.77■■□□□ 1.4
TNFRSF1A-212ENST00000539372 CRKP46108 304 aa23.77■■□□□ 1.4
TNFRSF1A-212ENST00000539372 MKRN3Q13064 507 aaKnown RBP23.77■■□□□ 1.4
TNFRSF1A-212ENST00000539372 TDRD3Q9H7E2 651 aaKnown RBP23.77■■□□□ 1.4
TNFRSF1A-212ENST00000539372 RNF186Q9NXI6 227 aa23.77■■□□□ 1.4
TNFRSF1A-212ENST00000539372 ANGEL1Q9UNK9 670 aaKnown RBP23.77■■□□□ 1.4
TNFRSF1A-212ENST00000539372 ECM29Q5VYK3 1845 aa23.77■■□□□ 1.4
TNFRSF1A-212ENST00000539372 TRPA1O75762 1119 aa23.76■■□□□ 1.39
TNFRSF1A-212ENST00000539372 ATF7IPQ6VMQ6 1270 aa23.76■■□□□ 1.39
TNFRSF1A-212ENST00000539372 DZIP1LQ8IYY4 767 aaKnown RBP23.76■■□□□ 1.39
TNFRSF1A-212ENST00000539372 TBC1D22AQ8WUA7 517 aa23.76■■□□□ 1.39
TNFRSF1A-212ENST00000539372 CLUAP1Q96AJ1 413 aa23.76■■□□□ 1.39
TNFRSF1A-212ENST00000539372 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.76■■□□□ 1.39
TNFRSF1A-212ENST00000539372 CEP126Q9P2H0 1117 aa23.76■■□□□ 1.39
TNFRSF1A-212ENST00000539372 ZNF70Q9UC06 446 aaPredicted RBP23.76■■□□□ 1.39
TNFRSF1A-212ENST00000539372 PPP2R3BQ9Y5P8 575 aa23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms