RNA–Protein interactions for RNA: ENST00000539271.5

LRTOMT-216, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 4 BASIC

Gene LRTOMT, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-216ENST00000539271 FAM205AQ6ZU69 1335 aa11.16□□□□□ -0.62
LRTOMT-216ENST00000539271 SASH1O94885 1247 aa11.16□□□□□ -0.62
LRTOMT-216ENST00000539271 IFIT1P09914 478 aaKnown RBP11.16□□□□□ -0.62
LRTOMT-216ENST00000539271 ATP8B2P98198 1209 aa11.16□□□□□ -0.62
LRTOMT-216ENST00000539271 POLA2Q14181 598 aa11.16□□□□□ -0.62
LRTOMT-216ENST00000539271 MVPQ14764 893 aaKnown RBP11.16□□□□□ -0.62
LRTOMT-216ENST00000539271 KIF4BQ2VIQ3 1234 aa11.16□□□□□ -0.62
LRTOMT-216ENST00000539271 SAMD1Q6SPF0 538 aaPredicted RBP11.16□□□□□ -0.62
LRTOMT-216ENST00000539271 LPIN2Q92539 896 aa11.16□□□□□ -0.62
LRTOMT-216ENST00000539271 SLC5A1P13866 664 aa11.15□□□□□ -0.62
LRTOMT-216ENST00000539271 MMP14P50281 582 aa11.15□□□□□ -0.62
LRTOMT-216ENST00000539271 FKBP1AP62942 108 aaKnown RBP11.15□□□□□ -0.62
LRTOMT-216ENST00000539271 PDE3AQ14432 1141 aa11.15□□□□□ -0.62
LRTOMT-216ENST00000539271 ATP2B3Q16720 1220 aa11.15□□□□□ -0.62
LRTOMT-216ENST00000539271 CAVIN4Q5BKX8 364 aa11.15□□□□□ -0.62
LRTOMT-216ENST00000539271 RBM26Q5T8P6 1007 aaKnown RBP11.15□□□□□ -0.62
LRTOMT-216ENST00000539271 COL13A1Q5TAT6 717 aaPredicted RBP11.15□□□□□ -0.62
LRTOMT-216ENST00000539271 VPS37DQ86XT2 251 aa11.15□□□□□ -0.62
LRTOMT-216ENST00000539271 CERS5Q8N5B7 392 aa11.15□□□□□ -0.62
LRTOMT-216ENST00000539271 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.15□□□□□ -0.62
LRTOMT-216ENST00000539271 SSH3Q8TE77 659 aa11.15□□□□□ -0.62
LRTOMT-216ENST00000539271 MYOZ2Q9NPC6 264 aa11.15□□□□□ -0.62
LRTOMT-216ENST00000539271 DDX19BQ9UMR2 479 aa11.15□□□□□ -0.62
LRTOMT-216ENST00000539271 COG6Q9Y2V7 657 aa11.15□□□□□ -0.62
LRTOMT-216ENST00000539271 MYH13Q9UKX3 1938 aa11.15□□□□□ -0.62
LRTOMT-216ENST00000539271 ARAP2Q8WZ64 1704 aa11.15□□□□□ -0.63
LRTOMT-216ENST00000539271 BCAMP50895 628 aa11.14□□□□□ -0.63
LRTOMT-216ENST00000539271 C20orf194Q5TEA3 1177 aa11.14□□□□□ -0.63
LRTOMT-216ENST00000539271 KIAA0825Q8IV33 1275 aa11.14□□□□□ -0.63
LRTOMT-216ENST00000539271 OGFOD1Q8N543 542 aa11.14□□□□□ -0.63
LRTOMT-216ENST00000539271 JAG2Q9Y219 1238 aa11.14□□□□□ -0.63
LRTOMT-216ENST00000539271 TRAF5O00463 557 aa11.13□□□□□ -0.63
LRTOMT-216ENST00000539271 TFCP2Q12800 502 aa11.13□□□□□ -0.63
LRTOMT-216ENST00000539271 G3BP1Q13283 466 aaKnown RBP eCLIP11.13□□□□□ -0.63
LRTOMT-216ENST00000539271 SCARF1Q14162 830 aa11.13□□□□□ -0.63
LRTOMT-216ENST00000539271 CEP85Q6P2H3 762 aa11.13□□□□□ -0.63
LRTOMT-216ENST00000539271 GLIS2Q9BZE0 524 aaPredicted RBP11.13□□□□□ -0.63
LRTOMT-216ENST00000539271 CREBZFQ9NS37 354 aa11.13□□□□□ -0.63
LRTOMT-216ENST00000539271 ZBTB40Q9NUA8 1239 aa11.13□□□□□ -0.63
LRTOMT-216ENST00000539271 HDAC9Q9UKV0 1011 aa11.13□□□□□ -0.63
LRTOMT-216ENST00000539271 IQSEC3Q9UPP2 1182 aaPredicted RBP11.13□□□□□ -0.63
LRTOMT-216ENST00000539271 ASTN2O75129 1339 aaPredicted RBP11.12□□□□□ -0.63
LRTOMT-216ENST00000539271 TMEM88BA6NKF7 163 aa11.12□□□□□ -0.63
LRTOMT-216ENST00000539271 FMR1Q06787 632 aaKnown RBP eCLIP11.12□□□□□ -0.63
LRTOMT-216ENST00000539271 MFSD14BQ5SR56 506 aa11.12□□□□□ -0.63
LRTOMT-216ENST00000539271 CDC37L1Q7L3B6 337 aa11.12□□□□□ -0.63
LRTOMT-216ENST00000539271 KLRG1Q96E93 195 aa11.12□□□□□ -0.63
LRTOMT-216ENST00000539271 ZBED3Q96IU2 234 aaPredicted RBP11.12□□□□□ -0.63
LRTOMT-216ENST00000539271 CHMP4BQ9H444 224 aaKnown RBP11.12□□□□□ -0.63
LRTOMT-216ENST00000539271 GGA3Q9NZ52 723 aa11.12□□□□□ -0.63
LRTOMT-216ENST00000539271 AKAP2Q9Y2D5 859 aa11.12□□□□□ -0.63
LRTOMT-216ENST00000539271 NOP58Q9Y2X3 529 aaKnown RBP11.12□□□□□ -0.63
LRTOMT-216ENST00000539271 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.12□□□□□ -0.63
LRTOMT-216ENST00000539271 A0A1B0GUL7 405 aa11.11□□□□□ -0.63
LRTOMT-216ENST00000539271 WNT10BO00744 389 aa11.11□□□□□ -0.63
LRTOMT-216ENST00000539271 FRAT2O75474 233 aaPredicted RBP11.11□□□□□ -0.63
LRTOMT-216ENST00000539271 ADORA1P30542 326 aa11.11□□□□□ -0.63
LRTOMT-216ENST00000539271 TIMM10P62072 90 aa11.11□□□□□ -0.63
LRTOMT-216ENST00000539271 CHAF1AQ13111 956 aaPredicted RBP11.11□□□□□ -0.63
LRTOMT-216ENST00000539271 NBPF9Q3BBW0 867 aa11.11□□□□□ -0.63
LRTOMT-216ENST00000539271 KRT26Q7Z3Y9 468 aa11.11□□□□□ -0.63
LRTOMT-216ENST00000539271 USP48Q86UV5 1035 aa11.11□□□□□ -0.63
LRTOMT-216ENST00000539271 MTMR14Q8NCE2 650 aa11.11□□□□□ -0.63
LRTOMT-216ENST00000539271 TBC1D22AQ8WUA7 517 aa11.11□□□□□ -0.63
LRTOMT-216ENST00000539271 DCPSQ96C86 337 aaKnown RBP11.11□□□□□ -0.63
LRTOMT-216ENST00000539271 ECM29Q5VYK3 1845 aa11.11□□□□□ -0.63
LRTOMT-216ENST00000539271 COL1A1P02452 1464 aaPredicted RBP11.11□□□□□ -0.63
LRTOMT-216ENST00000539271 PITPNM2Q9BZ72 1349 aa11.1□□□□□ -0.63
LRTOMT-216ENST00000539271 F8W031 263 aaPredicted RBP11.1□□□□□ -0.63
LRTOMT-216ENST00000539271 SURF6O75683 361 aaKnown RBP11.1□□□□□ -0.63
LRTOMT-216ENST00000539271 PHKA1P46020 1223 aa11.1□□□□□ -0.63
LRTOMT-216ENST00000539271 ANGEL2Q5VTE6 544 aaKnown RBP11.1□□□□□ -0.63
LRTOMT-216ENST00000539271 CST9Q5W186 159 aa11.1□□□□□ -0.63
LRTOMT-216ENST00000539271 XAGE2Q96GT9 111 aa11.1□□□□□ -0.63
LRTOMT-216ENST00000539271 GNL3LQ9NVN8 582 aaKnown RBP11.1□□□□□ -0.63
LRTOMT-216ENST00000539271 ADM5C9JUS6 153 aa11.09□□□□□ -0.63
LRTOMT-216ENST00000539271 SEMA3EO15041 775 aa11.09□□□□□ -0.63
LRTOMT-216ENST00000539271 CELF2O95319 508 aaKnown RBP11.09□□□□□ -0.63
LRTOMT-216ENST00000539271 RRP1P56182 461 aaKnown RBP11.09□□□□□ -0.63
LRTOMT-216ENST00000539271 OS9Q13438 667 aaPredicted RBP11.09□□□□□ -0.63
LRTOMT-216ENST00000539271 DLGAP5Q15398 846 aa11.09□□□□□ -0.63
LRTOMT-216ENST00000539271 GRIK5Q16478 980 aa11.09□□□□□ -0.63
LRTOMT-216ENST00000539271 CFAP100Q494V2 611 aa11.09□□□□□ -0.63
LRTOMT-216ENST00000539271 CCDC102BQ68D86 513 aa11.09□□□□□ -0.63
LRTOMT-216ENST00000539271 DLK2Q6UY11 383 aa11.09□□□□□ -0.63
LRTOMT-216ENST00000539271 SULF1Q8IWU6 871 aa11.09□□□□□ -0.63
LRTOMT-216ENST00000539271 SIRT2Q8IXJ6 389 aa11.09□□□□□ -0.63
LRTOMT-216ENST00000539271 RPAP2Q8IXW5 612 aaPredicted RBP11.09□□□□□ -0.63
LRTOMT-216ENST00000539271 WDR66Q8TBY9 1149 aa11.09□□□□□ -0.63
LRTOMT-216ENST00000539271 GPR108Q9NPR9 543 aa11.09□□□□□ -0.63
LRTOMT-216ENST00000539271 TTF2Q9UNY4 1162 aaKnown RBP11.09□□□□□ -0.63
LRTOMT-216ENST00000539271 SUGT1Q9Y2Z0 365 aa11.09□□□□□ -0.63
LRTOMT-216ENST00000539271 CNTNAP1P78357 1384 aa11.08□□□□□ -0.64
LRTOMT-216ENST00000539271 SPDYE2BA6NHP3 402 aa11.08□□□□□ -0.64
LRTOMT-216ENST00000539271 SPDYE6P0CI01 402 aa11.08□□□□□ -0.64
LRTOMT-216ENST00000539271 TNS4Q8IZW8 715 aa11.08□□□□□ -0.64
LRTOMT-216ENST00000539271 JMYQ8N9B5 988 aa11.08□□□□□ -0.64
LRTOMT-216ENST00000539271 NEUROD6Q96NK8 337 aa11.08□□□□□ -0.64
LRTOMT-216ENST00000539271 SERPINA10Q9UK55 444 aa11.08□□□□□ -0.64
LRTOMT-216ENST00000539271 DENND2AQ9ULE3 1009 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms