RNA–Protein interactions for RNA: ENST00000539232.1

LMO3-220, Transcript of LIM domain only 3, humanhuman

TSL 5

Gene LMO3, Length 580 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-220ENST00000539232 MPHOSPH8Q99549 860 aa9.12□□□□□ -0.95
LMO3-220ENST00000539232 RIPOR2Q9Y4F9 1068 aa9.12□□□□□ -0.95
LMO3-220ENST00000539232 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.12□□□□□ -0.95
LMO3-220ENST00000539232 AOX1Q06278 1338 aa9.11□□□□□ -0.95
LMO3-220ENST00000539232 H0YGN5 161 aa9.11□□□□□ -0.95
LMO3-220ENST00000539232 SLC10A3P09131 477 aa9.11□□□□□ -0.95
LMO3-220ENST00000539232 CT47B1P0C2W7 299 aaPredicted RBP9.11□□□□□ -0.95
LMO3-220ENST00000539232 TNIP1Q15025 636 aa9.11□□□□□ -0.95
LMO3-220ENST00000539232 GRIK5Q16478 980 aa9.11□□□□□ -0.95
LMO3-220ENST00000539232 CCDC57Q2TAC2 916 aa9.11□□□□□ -0.95
LMO3-220ENST00000539232 DACT2Q5SW24 774 aa9.11□□□□□ -0.95
LMO3-220ENST00000539232 CHRDL2Q6WN34 429 aa9.11□□□□□ -0.95
LMO3-220ENST00000539232 LDHAL6AQ6ZMR3 332 aa9.11□□□□□ -0.95
LMO3-220ENST00000539232 CERS5Q8N5B7 392 aa9.11□□□□□ -0.95
LMO3-220ENST00000539232 C2orf69Q8N8R5 385 aa9.11□□□□□ -0.95
LMO3-220ENST00000539232 PCDHAC2Q9Y5I4 1007 aa9.11□□□□□ -0.95
LMO3-220ENST00000539232 RANBP2P49792 3224 aaKnown RBP9.1□□□□□ -0.95
LMO3-220ENST00000539232 RSBN1LQ6PCB5 846 aaPredicted RBP9.1□□□□□ -0.95
LMO3-220ENST00000539232 ATG9AQ7Z3C6 839 aa9.1□□□□□ -0.95
LMO3-220ENST00000539232 USP48Q86UV5 1035 aa9.1□□□□□ -0.95
LMO3-220ENST00000539232 TMEM57Q8N5G2 664 aa9.1□□□□□ -0.95
LMO3-220ENST00000539232 VGLL2Q8N8G2 317 aa9.1□□□□□ -0.95
LMO3-220ENST00000539232 GBA2Q9HCG7 927 aaPredicted RBP9.1□□□□□ -0.95
LMO3-220ENST00000539232 RBM27Q9P2N5 1060 aaKnown RBP9.1□□□□□ -0.95
LMO3-220ENST00000539232 PA2G4Q9UQ80 394 aaKnown RBP9.1□□□□□ -0.95
LMO3-220ENST00000539232 LEMD3Q9Y2U8 911 aa9.1□□□□□ -0.95
LMO3-220ENST00000539232 LRRFIP2Q9Y608 721 aaKnown RBP9.1□□□□□ -0.95
LMO3-220ENST00000539232 MED23Q9ULK4 1368 aa9.1□□□□□ -0.95
LMO3-220ENST00000539232 ZBED9Q6R2W3 1325 aa9.09□□□□□ -0.95
LMO3-220ENST00000539232 LRRC37AA6NMS7 1700 aa9.09□□□□□ -0.95
LMO3-220ENST00000539232 ADM5C9JUS6 153 aa9.09□□□□□ -0.95
LMO3-220ENST00000539232 GPR25O00155 361 aa9.09□□□□□ -0.95
LMO3-220ENST00000539232 GYG1P46976 350 aa9.09□□□□□ -0.95
LMO3-220ENST00000539232 ZNF280AP59817 542 aaPredicted RBP9.09□□□□□ -0.95
LMO3-220ENST00000539232 GTF2IP78347 998 aa9.09□□□□□ -0.95
LMO3-220ENST00000539232 PTPN12Q05209 780 aaKnown RBP9.09□□□□□ -0.95
LMO3-220ENST00000539232 TAF7LQ5H9L4 462 aa9.09□□□□□ -0.95
LMO3-220ENST00000539232 FBXW7Q969H0 707 aa9.09□□□□□ -0.95
LMO3-220ENST00000539232 API5Q9BZZ5 524 aaKnown RBP9.09□□□□□ -0.95
LMO3-220ENST00000539232 ANKRD2Q9GZV1 360 aa9.09□□□□□ -0.95
LMO3-220ENST00000539232 CD209Q9NNX6 404 aa9.09□□□□□ -0.95
LMO3-220ENST00000539232 PRDM6Q9NQX0 595 aa9.09□□□□□ -0.95
LMO3-220ENST00000539232 CNNM1Q9NRU3 951 aa9.09□□□□□ -0.95
LMO3-220ENST00000539232 IQSEC3Q9UPP2 1182 aaPredicted RBP9.09□□□□□ -0.95
LMO3-220ENST00000539232 HTTP42858 3142 aa9.08□□□□□ -0.96
LMO3-220ENST00000539232 USP17L3A6NCW0 530 aa9.08□□□□□ -0.96
LMO3-220ENST00000539232 USP17L4A6NCW7 530 aa9.08□□□□□ -0.96
LMO3-220ENST00000539232 G3V3G9 751 aa9.08□□□□□ -0.96
LMO3-220ENST00000539232 TBC1D8O95759 1140 aa9.08□□□□□ -0.96
LMO3-220ENST00000539232 UBTFL1P0CB47 393 aaPredicted RBP9.08□□□□□ -0.96
LMO3-220ENST00000539232 EN2P19622 333 aaPredicted RBP9.08□□□□□ -0.96
LMO3-220ENST00000539232 KCNJ4P48050 445 aa9.08□□□□□ -0.96
LMO3-220ENST00000539232 DCAF8Q5TAQ9 597 aa9.08□□□□□ -0.96
LMO3-220ENST00000539232 PRAMEF18Q5VWM3 479 aa9.08□□□□□ -0.96
LMO3-220ENST00000539232 ATF7IPQ6VMQ6 1270 aa9.08□□□□□ -0.96
LMO3-220ENST00000539232 C15orf52Q6ZUT6 534 aaKnown RBP9.08□□□□□ -0.96
LMO3-220ENST00000539232 USP17L1Q7RTZ2 530 aa9.08□□□□□ -0.96
LMO3-220ENST00000539232 PANK1Q8TE04 598 aa9.08□□□□□ -0.96
LMO3-220ENST00000539232 ARHGAP45Q92619 1136 aa9.08□□□□□ -0.96
LMO3-220ENST00000539232 DPF2Q92785 391 aa9.08□□□□□ -0.96
LMO3-220ENST00000539232 FAM84BQ96KN1 310 aaPredicted RBP9.08□□□□□ -0.96
LMO3-220ENST00000539232 COA1Q9GZY4 146 aa9.08□□□□□ -0.96
LMO3-220ENST00000539232 SIL1Q9H173 461 aa9.08□□□□□ -0.96
LMO3-220ENST00000539232 C1orf115Q9H7X2 142 aa9.08□□□□□ -0.96
LMO3-220ENST00000539232 POLR2AP24928 1970 aaKnown RBP9.08□□□□□ -0.96
LMO3-220ENST00000539232 H7C1D1 291 aa9.07□□□□□ -0.96
LMO3-220ENST00000539232 FKTNO75072 461 aa9.07□□□□□ -0.96
LMO3-220ENST00000539232 BCAMP50895 628 aa9.07□□□□□ -0.96
LMO3-220ENST00000539232 SCARF1Q14162 830 aa9.07□□□□□ -0.96
LMO3-220ENST00000539232 KIF4BQ2VIQ3 1234 aa9.07□□□□□ -0.96
LMO3-220ENST00000539232 NBPF9Q3BBW0 867 aa9.07□□□□□ -0.96
LMO3-220ENST00000539232 PODNQ7Z5L7 613 aa9.07□□□□□ -0.96
LMO3-220ENST00000539232 KIAA0825Q8IV33 1275 aa9.07□□□□□ -0.96
LMO3-220ENST00000539232 UNC80Q8N2C7 3258 aa9.06□□□□□ -0.96
LMO3-220ENST00000539232 PNMA6EA0A0J9YXQ4 647 aa9.06□□□□□ -0.96
LMO3-220ENST00000539232 F8W031 263 aaPredicted RBP9.06□□□□□ -0.96
LMO3-220ENST00000539232 EYA2O00167 538 aa9.06□□□□□ -0.96
LMO3-220ENST00000539232 SASH1O94885 1247 aa9.06□□□□□ -0.96
LMO3-220ENST00000539232 USP17L8P0C7I0 530 aa9.06□□□□□ -0.96
LMO3-220ENST00000539232 IL1R1P14778 569 aa9.06□□□□□ -0.96
LMO3-220ENST00000539232 FGFR2P21802 821 aa9.06□□□□□ -0.96
LMO3-220ENST00000539232 RPS12P25398 132 aaKnown RBP9.06□□□□□ -0.96
LMO3-220ENST00000539232 ADORA1P30542 326 aa9.06□□□□□ -0.96
LMO3-220ENST00000539232 METTL24Q5JXM2 366 aa9.06□□□□□ -0.96
LMO3-220ENST00000539232 STRIP1Q5VSL9 837 aa9.06□□□□□ -0.96
LMO3-220ENST00000539232 ZKSCAN2Q63HK3 967 aa9.06□□□□□ -0.96
LMO3-220ENST00000539232 TTLL5Q6EMB2 1281 aa9.06□□□□□ -0.96
LMO3-220ENST00000539232 FBXO33Q7Z6M2 555 aa9.06□□□□□ -0.96
LMO3-220ENST00000539232 AGBL3Q8NEM8 1001 aa9.06□□□□□ -0.96
LMO3-220ENST00000539232 GGA3Q9NZ52 723 aa9.06□□□□□ -0.96
LMO3-220ENST00000539232 KIF16BQ96L93 1317 aa9.05□□□□□ -0.96
LMO3-220ENST00000539232 C20orf194Q5TEA3 1177 aa9.05□□□□□ -0.96
LMO3-220ENST00000539232 ANGEL2Q5VTE6 544 aaKnown RBP9.05□□□□□ -0.96
LMO3-220ENST00000539232 MOB2Q70IA6 237 aa9.05□□□□□ -0.96
LMO3-220ENST00000539232 KRT26Q7Z3Y9 468 aa9.05□□□□□ -0.96
LMO3-220ENST00000539232 RASAL3Q86YV0 1011 aa9.05□□□□□ -0.96
LMO3-220ENST00000539232 TDRD7Q8NHU6 1098 aaKnown RBP9.05□□□□□ -0.96
LMO3-220ENST00000539232 ZBED3Q96IU2 234 aaPredicted RBP9.05□□□□□ -0.96
LMO3-220ENST00000539232 TMEM106CQ9BVX2 250 aa9.05□□□□□ -0.96
LMO3-220ENST00000539232 PRO3102Q9H379 93 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms