RNA–Protein interactions for RNA: ENST00000538998.1

PBX3-212, Transcript of PBX homeobox 3, humanhuman

TSL 2

Gene PBX3, Length 1,035 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-212ENST00000538998 PLA2G12BQ9BX93 195 aa18.1■□□□□ 0.49
PBX3-212ENST00000538998 STK31Q9BXU1 1019 aa18.1■□□□□ 0.49
PBX3-212ENST00000538998 EFCC1Q9HA90 598 aa18.1■□□□□ 0.49
PBX3-212ENST00000538998 CD209Q9NNX6 404 aa18.1■□□□□ 0.49
PBX3-212ENST00000538998 SPDYE2BA6NHP3 402 aa18.08■□□□□ 0.48
PBX3-212ENST00000538998 APAF1O14727 1248 aa18.08■□□□□ 0.48
PBX3-212ENST00000538998 SPDYE6P0CI01 402 aa18.08■□□□□ 0.48
PBX3-212ENST00000538998 SP3Q02447 781 aa18.08■□□□□ 0.48
PBX3-212ENST00000538998 CHRNDQ07001 517 aa18.08■□□□□ 0.48
PBX3-212ENST00000538998 ANKRD13AQ8IZ07 590 aa18.08■□□□□ 0.48
PBX3-212ENST00000538998 CERS5Q8N5B7 392 aa18.08■□□□□ 0.48
PBX3-212ENST00000538998 CLRN2A0PK11 232 aa18.07■□□□□ 0.48
PBX3-212ENST00000538998 EN2P19622 333 aaPredicted RBP18.07■□□□□ 0.48
PBX3-212ENST00000538998 FKBP1AP62942 108 aaKnown RBP18.07■□□□□ 0.48
PBX3-212ENST00000538998 CFAP100Q494V2 611 aa18.07■□□□□ 0.48
PBX3-212ENST00000538998 C15orf52Q6ZUT6 534 aaKnown RBP18.07■□□□□ 0.48
PBX3-212ENST00000538998 TMEM106CQ9BVX2 250 aa18.07■□□□□ 0.48
PBX3-212ENST00000538998 VEZTQ9HBM0 779 aa18.07■□□□□ 0.48
PBX3-212ENST00000538998 TESPA1A2RU30 521 aaPredicted RBP18.06■□□□□ 0.48
PBX3-212ENST00000538998 CSF1RP07333 972 aa18.06■□□□□ 0.48
PBX3-212ENST00000538998 GJA5P36382 358 aa18.06■□□□□ 0.48
PBX3-212ENST00000538998 FXR1P51114 621 aaKnown RBP eCLIP18.06■□□□□ 0.48
PBX3-212ENST00000538998 GCKRQ14397 625 aa18.06■□□□□ 0.48
PBX3-212ENST00000538998 NBPF12Q5TAG4 269 aaPredicted RBP18.06■□□□□ 0.48
PBX3-212ENST00000538998 ZNF804AQ7Z570 1209 aa18.06■□□□□ 0.48
PBX3-212ENST00000538998 TSPYL6Q8N831 410 aa18.06■□□□□ 0.48
PBX3-212ENST00000538998 IRS2Q9Y4H2 1338 aa18.05■□□□□ 0.48
PBX3-212ENST00000538998 F8W031 263 aaPredicted RBP18.05■□□□□ 0.48
PBX3-212ENST00000538998 USP2O75604 605 aaPredicted RBP18.05■□□□□ 0.48
PBX3-212ENST00000538998 IL1R1P14778 569 aa18.05■□□□□ 0.48
PBX3-212ENST00000538998 ARHGEF6Q15052 776 aa18.05■□□□□ 0.48
PBX3-212ENST00000538998 ZNF333Q96JL9 665 aa18.05■□□□□ 0.48
PBX3-212ENST00000538998 PTPN18Q99952 460 aa18.05■□□□□ 0.48
PBX3-212ENST00000538998 MYH16Q9H6N6 1097 aa18.05■□□□□ 0.48
PBX3-212ENST00000538998 PCDHAC2Q9Y5I4 1007 aa18.05■□□□□ 0.48
PBX3-212ENST00000538998 MKI67P46013 3256 aaKnown RBP18.05■□□□□ 0.48
PBX3-212ENST00000538998 ECM29Q5VYK3 1845 aa18.05■□□□□ 0.48
PBX3-212ENST00000538998 ANKRD18BA2A2Z9 1011 aa18.04■□□□□ 0.48
PBX3-212ENST00000538998 TNFAIP1Q13829 316 aa18.04■□□□□ 0.48
PBX3-212ENST00000538998 RASA3Q14644 834 aa18.04■□□□□ 0.48
PBX3-212ENST00000538998 NBPF11Q86T75 865 aa18.04■□□□□ 0.48
PBX3-212ENST00000538998 PRMT6Q96LA8 375 aaPredicted RBP18.04■□□□□ 0.48
PBX3-212ENST00000538998 RBM5P52756 815 aaKnown RBP eCLIP18.03■□□□□ 0.48
PBX3-212ENST00000538998 CASP7P55210 303 aa18.03■□□□□ 0.48
PBX3-212ENST00000538998 DDX10Q13206 875 aaKnown RBP18.03■□□□□ 0.48
PBX3-212ENST00000538998 SLC9C1Q4G0N8 1177 aa18.03■□□□□ 0.48
PBX3-212ENST00000538998 OPTNQ96CV9 577 aa18.03■□□□□ 0.48
PBX3-212ENST00000538998 SNAP23O00161 211 aa18.02■□□□□ 0.48
PBX3-212ENST00000538998 TAF5LO75529 589 aa18.02■□□□□ 0.48
PBX3-212ENST00000538998 ELP3Q9H9T3 547 aa18.02■□□□□ 0.48
PBX3-212ENST00000538998 SLC4A2P04920 1241 aa18.01■□□□□ 0.47
PBX3-212ENST00000538998 CAP1Q01518 475 aa18.01■□□□□ 0.47
PBX3-212ENST00000538998 G2E3Q7L622 706 aa18.01■□□□□ 0.47
PBX3-212ENST00000538998 HELBQ8NG08 1087 aaPredicted RBP18.01■□□□□ 0.47
PBX3-212ENST00000538998 LINS1Q8NG48 757 aa18.01■□□□□ 0.47
PBX3-212ENST00000538998 MS4A4AQ96JQ5 239 aa18.01■□□□□ 0.47
PBX3-212ENST00000538998 ZFYVE28Q9HCC9 887 aa18.01■□□□□ 0.47
PBX3-212ENST00000538998 AOX1Q06278 1338 aa18■□□□□ 0.47
PBX3-212ENST00000538998 GTF2A2P52657 109 aa18■□□□□ 0.47
PBX3-212ENST00000538998 IFIT5Q13325 482 aaKnown RBP18■□□□□ 0.47
PBX3-212ENST00000538998 TAF1CQ15572 869 aaPredicted RBP18■□□□□ 0.47
PBX3-212ENST00000538998 SLC4A8Q2Y0W8 1093 aa18■□□□□ 0.47
PBX3-212ENST00000538998 TWISTNBQ3B726 338 aaPredicted RBP18■□□□□ 0.47
PBX3-212ENST00000538998 TSR2Q969E8 191 aaKnown RBP18■□□□□ 0.47
PBX3-212ENST00000538998 COLQQ9Y215 455 aaPredicted RBP18■□□□□ 0.47
PBX3-212ENST00000538998 PTCH2Q9Y6C5 1203 aa18■□□□□ 0.47
PBX3-212ENST00000538998 CENPFP49454 3210 aa17.99■□□□□ 0.47
PBX3-212ENST00000538998 FLIIQ13045 1269 aa17.99■□□□□ 0.47
PBX3-212ENST00000538998 SPDYE2Q495Y8 402 aa17.99■□□□□ 0.47
PBX3-212ENST00000538998 DNAAF4Q8WXU2 420 aa17.99■□□□□ 0.47
PBX3-212ENST00000538998 BRI3BPQ8WY22 251 aa17.99■□□□□ 0.47
PBX3-212ENST00000538998 SERPINA10Q9UK55 444 aa17.99■□□□□ 0.47
PBX3-212ENST00000538998 KIAA0100Q14667 2235 aaKnown RBP17.99■□□□□ 0.47
PBX3-212ENST00000538998 CCL15-CCL14A0A0B4J2E2 113 aa17.98■□□□□ 0.47
PBX3-212ENST00000538998 WDHD1O75717 1129 aaPredicted RBP17.98■□□□□ 0.47
PBX3-212ENST00000538998 FKBP5Q13451 457 aaPredicted RBP17.98■□□□□ 0.47
PBX3-212ENST00000538998 CCL15Q16663 113 aa17.98■□□□□ 0.47
PBX3-212ENST00000538998 ZNF70Q9UC06 446 aaPredicted RBP17.98■□□□□ 0.47
PBX3-212ENST00000538998 JAG2Q9Y219 1238 aa17.98■□□□□ 0.47
PBX3-212ENST00000538998 OTOFQ9HC10 1997 aa17.98■□□□□ 0.47
PBX3-212ENST00000538998 FAM205AQ6ZU69 1335 aa17.98■□□□□ 0.47
PBX3-212ENST00000538998 VGLL4Q14135 290 aa17.97■□□□□ 0.47
PBX3-212ENST00000538998 MFSD14BQ5SR56 506 aa17.97■□□□□ 0.47
PBX3-212ENST00000538998 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.97■□□□□ 0.47
PBX3-212ENST00000538998 TEPSINQ96N21 525 aa17.97■□□□□ 0.47
PBX3-212ENST00000538998 CHMP3Q9Y3E7 222 aa17.97■□□□□ 0.47
PBX3-212ENST00000538998 CSADQ9Y600 493 aa17.97■□□□□ 0.47
PBX3-212ENST00000538998 BRCA2P51587 3418 aa17.97■□□□□ 0.47
PBX3-212ENST00000538998 TNNI2P48788 182 aa17.96■□□□□ 0.47
PBX3-212ENST00000538998 MAP3K9P80192 1104 aa17.96■□□□□ 0.47
PBX3-212ENST00000538998 TDRD3Q9H7E2 651 aaKnown RBP17.96■□□□□ 0.47
PBX3-212ENST00000538998 PRKRIP1Q9H875 184 aaPredicted RBP17.96■□□□□ 0.47
PBX3-212ENST00000538998 TTF2Q9UNY4 1162 aaKnown RBP17.96■□□□□ 0.47
PBX3-212ENST00000538998 A0A1B0GUL6 1792 aa17.95■□□□□ 0.46
PBX3-212ENST00000538998 FOXO4P98177 505 aa17.95■□□□□ 0.46
PBX3-212ENST00000538998 KIF22Q14807 665 aa17.95■□□□□ 0.46
PBX3-212ENST00000538998 DZIP1LQ8IYY4 767 aaKnown RBP17.95■□□□□ 0.46
PBX3-212ENST00000538998 FAM43AQ8N2R8 423 aa17.95■□□□□ 0.46
PBX3-212ENST00000538998 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.95■□□□□ 0.46
PBX3-212ENST00000538998 CNKSR2Q8WXI2 1034 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms